RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 NR6A1Q15406 480 aa8.24□□□□□ -1.09
PRKDC-211ENST00000546304 ZNF790Q6PG37 636 aa8.24□□□□□ -1.09
PRKDC-211ENST00000546304 DEFB132Q7Z7B7 95 aa8.24□□□□□ -1.09
PRKDC-211ENST00000546304 TTC5Q8N0Z6 440 aa8.24□□□□□ -1.09
PRKDC-211ENST00000546304 IFT57Q9NWB7 429 aa8.24□□□□□ -1.09
PRKDC-211ENST00000546304 TSPYL4Q9UJ04 414 aa8.24□□□□□ -1.09
PRKDC-211ENST00000546304 TLL2Q9Y6L7 1015 aa8.24□□□□□ -1.09
PRKDC-211ENST00000546304 WASF2Q9Y6W5 498 aa8.24□□□□□ -1.09
PRKDC-211ENST00000546304 IL16Q14005 1332 aa8.24□□□□□ -1.09
PRKDC-211ENST00000546304 LOC102724428A0A0B4J2F2 783 aa8.23□□□□□ -1.09
PRKDC-211ENST00000546304 SOCS7O14512 581 aa8.23□□□□□ -1.09
PRKDC-211ENST00000546304 SIK1P57059 783 aa8.23□□□□□ -1.09
PRKDC-211ENST00000546304 AGERQ15109 404 aa8.23□□□□□ -1.09
PRKDC-211ENST00000546304 TAF7Q15545 349 aaPredicted RBP8.23□□□□□ -1.09
PRKDC-211ENST00000546304 PDXDC2PQ6P474 469 aa8.23□□□□□ -1.09
PRKDC-211ENST00000546304 CCNL1Q9UK58 526 aaPredicted RBP8.23□□□□□ -1.09
PRKDC-211ENST00000546304 SCN7AQ01118 1682 aa8.23□□□□□ -1.09
PRKDC-211ENST00000546304 ZBED9Q6R2W3 1325 aa8.23□□□□□ -1.09
PRKDC-211ENST00000546304 SRCAPQ6ZRS2 3230 aa8.23□□□□□ -1.09
PRKDC-211ENST00000546304 HEG1Q9ULI3 1381 aa8.22□□□□□ -1.09
PRKDC-211ENST00000546304 PTCD1O75127 700 aaKnown RBP8.22□□□□□ -1.09
PRKDC-211ENST00000546304 ADH1CP00326 375 aa8.22□□□□□ -1.09
PRKDC-211ENST00000546304 GNAI1P63096 354 aa8.22□□□□□ -1.09
PRKDC-211ENST00000546304 EZH2Q15910 746 aaKnown RBP8.22□□□□□ -1.09
PRKDC-211ENST00000546304 TXNRD1Q16881 649 aa8.22□□□□□ -1.09
PRKDC-211ENST00000546304 SLC27A3Q5K4L6 730 aa8.22□□□□□ -1.09
PRKDC-211ENST00000546304 ZNF787Q6DD87 383 aa8.22□□□□□ -1.09
PRKDC-211ENST00000546304 TRMT44Q8IYL2 757 aaKnown RBP8.22□□□□□ -1.09
PRKDC-211ENST00000546304 ZNF496Q96IT1 587 aaPredicted RBP8.22□□□□□ -1.09
PRKDC-211ENST00000546304 CAMKK2Q96RR4 588 aa8.22□□□□□ -1.09
PRKDC-211ENST00000546304 HMX1Q9NP08 348 aaPredicted RBP8.22□□□□□ -1.09
PRKDC-211ENST00000546304 BABAM1Q9NWV8 329 aa8.22□□□□□ -1.09
PRKDC-211ENST00000546304 LAS1LQ9Y4W2 734 aaKnown RBP8.22□□□□□ -1.09
PRKDC-211ENST00000546304 CACNA1FO60840 1977 aa8.22□□□□□ -1.09
PRKDC-211ENST00000546304 FANCIQ9NVI1 1328 aa8.22□□□□□ -1.09
PRKDC-211ENST00000546304 BCORQ6W2J9 1755 aa8.22□□□□□ -1.09
PRKDC-211ENST00000546304 CASZ1Q86V15 1759 aa8.22□□□□□ -1.09
PRKDC-211ENST00000546304 CHL1O00533 1208 aa8.21□□□□□ -1.1
PRKDC-211ENST00000546304 KCNQ3O43525 872 aa8.21□□□□□ -1.1
PRKDC-211ENST00000546304 ZNF853P0CG23 659 aa8.21□□□□□ -1.1
PRKDC-211ENST00000546304 WDR63Q8IWG1 891 aa8.21□□□□□ -1.1
PRKDC-211ENST00000546304 PNMA1Q8ND90 353 aa8.21□□□□□ -1.1
PRKDC-211ENST00000546304 TSR2Q969E8 191 aaKnown RBP8.21□□□□□ -1.1
PRKDC-211ENST00000546304 FMNL2Q96PY5 1086 aa8.21□□□□□ -1.1
PRKDC-211ENST00000546304 SLC4A9Q96Q91 983 aa8.21□□□□□ -1.1
PRKDC-211ENST00000546304 MBIPQ9NS73 344 aa8.21□□□□□ -1.1
PRKDC-211ENST00000546304 LRRC4BQ9NT99 713 aa8.21□□□□□ -1.1
PRKDC-211ENST00000546304 MIS18AQ9NYP9 233 aa8.21□□□□□ -1.1
PRKDC-211ENST00000546304 GPSM3Q9Y4H4 160 aa8.21□□□□□ -1.1
PRKDC-211ENST00000546304 KCNQ4P56696 695 aa8.2□□□□□ -1.1
PRKDC-211ENST00000546304 ITPK1Q13572 414 aa8.2□□□□□ -1.1
PRKDC-211ENST00000546304 BANK1Q8NDB2 785 aa8.2□□□□□ -1.1
PRKDC-211ENST00000546304 MYH16Q9H6N6 1097 aa8.2□□□□□ -1.1
PRKDC-211ENST00000546304 DACH1Q9UI36 760 aa8.2□□□□□ -1.1
PRKDC-211ENST00000546304 MAP4K5Q9Y4K4 846 aa8.2□□□□□ -1.1
PRKDC-211ENST00000546304 CNTNAP4Q9C0A0 1308 aa8.2□□□□□ -1.1
PRKDC-211ENST00000546304 POTECB2RU33 542 aa8.19□□□□□ -1.1
PRKDC-211ENST00000546304 E9PSI1 815 aa8.19□□□□□ -1.1
PRKDC-211ENST00000546304 EIF4A1P60842 406 aaKnown RBP8.19□□□□□ -1.1
PRKDC-211ENST00000546304 NR5A1Q13285 461 aa8.19□□□□□ -1.1
PRKDC-211ENST00000546304 DNAJC10Q8IXB1 793 aa8.19□□□□□ -1.1
PRKDC-211ENST00000546304 LINC00116Q8NCU8 138 aa8.19□□□□□ -1.1
PRKDC-211ENST00000546304 EPS8L1Q8TE68 723 aa8.19□□□□□ -1.1
PRKDC-211ENST00000546304 TRIM34Q9BYJ4 488 aa8.19□□□□□ -1.1
PRKDC-211ENST00000546304 MAGEB6P1A0A0J9YX57 407 aa8.18□□□□□ -1.1
PRKDC-211ENST00000546304 SNRPA1P09661 255 aaKnown RBP8.18□□□□□ -1.1
PRKDC-211ENST00000546304 GRM5P41594 1212 aa8.18□□□□□ -1.1
PRKDC-211ENST00000546304 NNTQ13423 1086 aa8.18□□□□□ -1.1
PRKDC-211ENST00000546304 ZNF827Q17R98 1081 aa8.18□□□□□ -1.1
PRKDC-211ENST00000546304 KRT24Q2M2I5 525 aa8.18□□□□□ -1.1
PRKDC-211ENST00000546304 ERFEQ4G0M1 354 aa8.18□□□□□ -1.1
PRKDC-211ENST00000546304 ARHGAP9Q9BRR9 750 aa8.18□□□□□ -1.1
PRKDC-211ENST00000546304 ANKRD36CQ5JPF3 1778 aa8.17□□□□□ -1.1
PRKDC-211ENST00000546304 ARFGEF2Q9Y6D5 1785 aa8.17□□□□□ -1.1
PRKDC-211ENST00000546304 PRAMEF22A3QJZ6 481 aa8.17□□□□□ -1.1
PRKDC-211ENST00000546304 GIGYF1O75420 1035 aaPredicted RBP8.17□□□□□ -1.1
PRKDC-211ENST00000546304 HOXB7P09629 217 aa8.17□□□□□ -1.1
PRKDC-211ENST00000546304 HMGB2P26583 209 aaKnown RBP8.17□□□□□ -1.1
PRKDC-211ENST00000546304 CRKLP46109 303 aaKnown RBP8.17□□□□□ -1.1
PRKDC-211ENST00000546304 PTK2Q05397 1052 aa8.17□□□□□ -1.1
PRKDC-211ENST00000546304 ARID5BQ14865 1188 aa8.17□□□□□ -1.1
PRKDC-211ENST00000546304 YTHDC1Q96MU7 727 aaKnown RBP8.17□□□□□ -1.1
PRKDC-211ENST00000546304 KLF16Q9BXK1 252 aaPredicted RBP8.17□□□□□ -1.1
PRKDC-211ENST00000546304 ATP13A2Q9NQ11 1180 aa8.17□□□□□ -1.1
PRKDC-211ENST00000546304 ZBTB1Q9Y2K1 713 aa8.17□□□□□ -1.1
PRKDC-211ENST00000546304 CAPN5O15484 640 aaPredicted RBP8.16□□□□□ -1.1
PRKDC-211ENST00000546304 STARD3NLO95772 234 aa8.16□□□□□ -1.1
PRKDC-211ENST00000546304 CYP19A1P11511 503 aaPredicted RBP8.16□□□□□ -1.1
PRKDC-211ENST00000546304 COL15A1P39059 1388 aa8.16□□□□□ -1.1
PRKDC-211ENST00000546304 SOS1Q07889 1333 aaPredicted RBP8.16□□□□□ -1.1
PRKDC-211ENST00000546304 SLFN5Q08AF3 891 aa8.16□□□□□ -1.1
PRKDC-211ENST00000546304 ERBB4Q15303 1308 aa8.16□□□□□ -1.1
PRKDC-211ENST00000546304 COL24A1Q17RW2 1714 aa8.16□□□□□ -1.1
PRKDC-211ENST00000546304 DUSP27Q5VZP5 1158 aa8.16□□□□□ -1.1
PRKDC-211ENST00000546304 N4BP2Q86UW6 1770 aaPredicted RBP8.16□□□□□ -1.1
PRKDC-211ENST00000546304 OCSTAMPQ9BR26 566 aa8.16□□□□□ -1.1
PRKDC-211ENST00000546304 TEX13AQ9BXU3 409 aaPredicted RBP8.16□□□□□ -1.1
PRKDC-211ENST00000546304 CCDC87Q9NVE4 849 aa8.16□□□□□ -1.1
PRKDC-211ENST00000546304 STK32BQ9NY57 414 aa8.16□□□□□ -1.1
PRKDC-211ENST00000546304 NUP98P52948 1817 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms