RNA–Protein interactions for RNA: ENST00000545964.1

MDM1-215, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-215ENST00000545964 RGPD3A6NKT7 1758 aaPredicted RBP5.52□□□□□ -1.53
MDM1-215ENST00000545964 RGPD4Q7Z3J3 1758 aa5.52□□□□□ -1.53
MDM1-215ENST00000545964 MON2Q7Z3U7 1717 aa5.52□□□□□ -1.53
MDM1-215ENST00000545964 PDE4DQ08499 809 aa5.52□□□□□ -1.53
MDM1-215ENST00000545964 TRAPPC3LQ5T215 181 aa5.52□□□□□ -1.53
MDM1-215ENST00000545964 SH3RF1Q7Z6J0 888 aa5.52□□□□□ -1.53
MDM1-215ENST00000545964 LINC00116Q8NCU8 138 aa5.52□□□□□ -1.53
MDM1-215ENST00000545964 BEGAINQ9BUH8 593 aa5.52□□□□□ -1.53
MDM1-215ENST00000545964 C1QTNF2Q9BXJ5 285 aa5.52□□□□□ -1.53
MDM1-215ENST00000545964 POLKQ9UBT6 870 aa5.52□□□□□ -1.53
MDM1-215ENST00000545964 MKL2Q9ULH7 1088 aa5.52□□□□□ -1.53
MDM1-215ENST00000545964 FLT4P35916 1363 aa5.52□□□□□ -1.53
MDM1-215ENST00000545964 LTN1O94822 1766 aa5.52□□□□□ -1.53
MDM1-215ENST00000545964 WASHC2AQ641Q2 1341 aa5.51□□□□□ -1.53
MDM1-215ENST00000545964 A0A0G2JLW4 131 aa5.51□□□□□ -1.53
MDM1-215ENST00000545964 PHKG2P15735 406 aa5.51□□□□□ -1.53
MDM1-215ENST00000545964 CABP4P57796 275 aa5.51□□□□□ -1.53
MDM1-215ENST00000545964 ITPK1Q13572 414 aa5.51□□□□□ -1.53
MDM1-215ENST00000545964 PLEKHO1Q53GL0 409 aaPredicted RBP5.51□□□□□ -1.53
MDM1-215ENST00000545964 LCE3BQ5TA77 95 aa5.51□□□□□ -1.53
MDM1-215ENST00000545964 ARHGAP27Q6ZUM4 889 aa5.51□□□□□ -1.53
MDM1-215ENST00000545964 SPIRE2Q8WWL2 714 aa5.51□□□□□ -1.53
MDM1-215ENST00000545964 GPKOWQ92917 476 aaPredicted RBP eCLIP5.51□□□□□ -1.53
MDM1-215ENST00000545964 ATG3Q9NT62 314 aa5.51□□□□□ -1.53
MDM1-215ENST00000545964 RTL1A6NKG5 1358 aa5.51□□□□□ -1.53
MDM1-215ENST00000545964 WNK3Q9BYP7 1800 aa5.51□□□□□ -1.53
MDM1-215ENST00000545964 IGSF1Q8N6C5 1336 aa5.5□□□□□ -1.53
MDM1-215ENST00000545964 NSD3Q9BZ95 1437 aa5.5□□□□□ -1.53
MDM1-215ENST00000545964 PTCD1O75127 700 aaKnown RBP5.5□□□□□ -1.53
MDM1-215ENST00000545964 ITGB2P05107 769 aa5.5□□□□□ -1.53
MDM1-215ENST00000545964 MMP10P09238 476 aa5.5□□□□□ -1.53
MDM1-215ENST00000545964 SSFA2P28290 1259 aa5.5□□□□□ -1.53
MDM1-215ENST00000545964 RFC4P35249 363 aa5.5□□□□□ -1.53
MDM1-215ENST00000545964 MTHFSP49914 203 aa5.5□□□□□ -1.53
MDM1-215ENST00000545964 EIF4A2Q14240 407 aaKnown RBP5.5□□□□□ -1.53
MDM1-215ENST00000545964 MORC1Q86VD1 984 aa5.5□□□□□ -1.53
MDM1-215ENST00000545964 NLGN1Q8N2Q7 840 aa5.5□□□□□ -1.53
MDM1-215ENST00000545964 PANK3Q9H999 370 aa5.5□□□□□ -1.53
MDM1-215ENST00000545964 BCS1LQ9Y276 419 aa5.5□□□□□ -1.53
MDM1-215ENST00000545964 RTCBQ9Y3I0 505 aaKnown RBP5.5□□□□□ -1.53
MDM1-215ENST00000545964 UTRNP46939 3433 aa5.5□□□□□ -1.53
MDM1-215ENST00000545964 MOXD2PA6NHM9 499 aa5.49□□□□□ -1.53
MDM1-215ENST00000545964 ERVV-2B6SEH9 535 aa5.49□□□□□ -1.53
MDM1-215ENST00000545964 H7C1W4 665 aa5.49□□□□□ -1.53
MDM1-215ENST00000545964 F12P00748 615 aaPredicted RBP5.49□□□□□ -1.53
MDM1-215ENST00000545964 NDUFV2P19404 249 aa5.49□□□□□ -1.53
MDM1-215ENST00000545964 CNGB1Q14028 1251 aaPredicted RBP5.49□□□□□ -1.53
MDM1-215ENST00000545964 ZNF530Q6P9A1 599 aaPredicted RBP5.49□□□□□ -1.53
MDM1-215ENST00000545964 NFATC2IPQ8NCF5 419 aa5.49□□□□□ -1.53
MDM1-215ENST00000545964 TRERF1Q96PN7 1200 aa5.49□□□□□ -1.53
MDM1-215ENST00000545964 PARP3Q9Y6F1 533 aa5.49□□□□□ -1.53
MDM1-215ENST00000545964 KIF24Q5T7B8 1368 aa5.49□□□□□ -1.53
MDM1-215ENST00000545964 ATP10DQ9P241 1426 aa5.48□□□□□ -1.53
MDM1-215ENST00000545964 PAPPAQ13219 1627 aa5.48□□□□□ -1.53
MDM1-215ENST00000545964 RGPD2P0DJD1 1756 aa5.48□□□□□ -1.53
MDM1-215ENST00000545964 RPS6KA4O75676 772 aa5.48□□□□□ -1.53
MDM1-215ENST00000545964 HSP90AB1P08238 724 aaKnown RBP5.48□□□□□ -1.53
MDM1-215ENST00000545964 FURINP09958 794 aa5.48□□□□□ -1.53
MDM1-215ENST00000545964 HSPA5P11021 654 aaKnown RBP5.48□□□□□ -1.53
MDM1-215ENST00000545964 DPEP1P16444 411 aa5.48□□□□□ -1.53
MDM1-215ENST00000545964 TGFB2P61812 414 aa5.48□□□□□ -1.53
MDM1-215ENST00000545964 EIF4G2P78344 907 aaKnown RBP eCLIP5.48□□□□□ -1.53
MDM1-215ENST00000545964 C1orf141Q5JVX7 400 aa5.48□□□□□ -1.53
MDM1-215ENST00000545964 PPP1R26Q5T8A7 1209 aaPredicted RBP5.48□□□□□ -1.53
MDM1-215ENST00000545964 SULT6B1Q6IMI4 303 aa5.48□□□□□ -1.53
MDM1-215ENST00000545964 SLC4A9Q96Q91 983 aa5.48□□□□□ -1.53
MDM1-215ENST00000545964 POLMQ9NP87 494 aaPredicted RBP5.48□□□□□ -1.53
MDM1-215ENST00000545964 CCDC87Q9NVE4 849 aa5.48□□□□□ -1.53
MDM1-215ENST00000545964 TIMELESSQ9UNS1 1208 aa5.48□□□□□ -1.53
MDM1-215ENST00000545964 USP54Q70EL1 1684 aa5.47□□□□□ -1.53
MDM1-215ENST00000545964 HSPA6P17066 643 aa5.47□□□□□ -1.53
MDM1-215ENST00000545964 AMOTQ4VCS5 1084 aa5.47□□□□□ -1.53
MDM1-215ENST00000545964 AEBP1Q8IUX7 1158 aa5.47□□□□□ -1.53
MDM1-215ENST00000545964 TBC1D2Q9BYX2 928 aa5.47□□□□□ -1.53
MDM1-215ENST00000545964 SRP68Q9UHB9 627 aaKnown RBP5.47□□□□□ -1.53
MDM1-215ENST00000545964 KNSTRNQ9Y448 316 aa5.47□□□□□ -1.53
MDM1-215ENST00000545964 FAM208AQ9UK61 1670 aaKnown RBP5.47□□□□□ -1.53
MDM1-215ENST00000545964 CHD4Q14839 1912 aa5.46□□□□□ -1.53
MDM1-215ENST00000545964 DOT1LQ8TEK3 1739 aa5.46□□□□□ -1.54
MDM1-215ENST00000545964 OIP5O43482 229 aa5.46□□□□□ -1.54
MDM1-215ENST00000545964 GYS1P13807 737 aa5.46□□□□□ -1.54
MDM1-215ENST00000545964 MAP2K3P46734 347 aa5.46□□□□□ -1.54
MDM1-215ENST00000545964 GAS6Q14393 721 aa5.46□□□□□ -1.54
MDM1-215ENST00000545964 C4orf48Q5BLP8 95 aa5.46□□□□□ -1.54
MDM1-215ENST00000545964 PRPF38BQ5VTL8 546 aaKnown RBP5.46□□□□□ -1.54
MDM1-215ENST00000545964 LYSMD3Q7Z3D4 306 aa5.46□□□□□ -1.54
MDM1-215ENST00000545964 TRIM22Q8IYM9 498 aa5.46□□□□□ -1.54
MDM1-215ENST00000545964 RNF217Q8TC41 542 aa5.46□□□□□ -1.54
MDM1-215ENST00000545964 CCER1Q8TC90 406 aaPredicted RBP5.46□□□□□ -1.54
MDM1-215ENST00000545964 ZBTB3Q9H5J0 574 aa5.46□□□□□ -1.54
MDM1-215ENST00000545964 LGR6Q9HBX8 967 aa5.46□□□□□ -1.54
MDM1-215ENST00000545964 PIM2Q9P1W9 311 aa5.46□□□□□ -1.54
MDM1-215ENST00000545964 GOLGB1Q14789 3259 aaKnown RBP5.45□□□□□ -1.54
MDM1-215ENST00000545964 TOMM70O94826 608 aa5.45□□□□□ -1.54
MDM1-215ENST00000545964 HMOX1P09601 288 aa5.45□□□□□ -1.54
MDM1-215ENST00000545964 KCNA3P22001 575 aa5.45□□□□□ -1.54
MDM1-215ENST00000545964 CHRNA5P30532 468 aa5.45□□□□□ -1.54
MDM1-215ENST00000545964 CTSOP43234 321 aaPredicted RBP5.45□□□□□ -1.54
MDM1-215ENST00000545964 CRKLP46109 303 aaKnown RBP5.45□□□□□ -1.54
MDM1-215ENST00000545964 SLC39A6Q13433 755 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms