RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 ZSCAN25Q6NSZ9 544 aa18.57■□□□□ 0.56
LDLR-204ENST00000545707 RAB11FIP4Q86YS3 637 aa18.57■□□□□ 0.56
LDLR-204ENST00000545707 C16orf45Q96MC5 204 aaPredicted RBP18.57■□□□□ 0.56
LDLR-204ENST00000545707 HELLSQ9NRZ9 838 aa18.57■□□□□ 0.56
LDLR-204ENST00000545707 CLIP2Q9UDT6 1046 aa18.57■□□□□ 0.56
LDLR-204ENST00000545707 ZNF330Q9Y3S2 320 aaPredicted RBP18.57■□□□□ 0.56
LDLR-204ENST00000545707 AFDNP55196 1824 aaKnown RBP18.56■□□□□ 0.56
LDLR-204ENST00000545707 PDIA3P30101 505 aaKnown RBP18.56■□□□□ 0.56
LDLR-204ENST00000545707 ARID5BQ14865 1188 aa18.56■□□□□ 0.56
LDLR-204ENST00000545707 ILDR1Q86SU0 546 aaPredicted RBP18.56■□□□□ 0.56
LDLR-204ENST00000545707 OSBP2Q969R2 916 aa18.56■□□□□ 0.56
LDLR-204ENST00000545707 DSCC1Q9BVC3 393 aa18.56■□□□□ 0.56
LDLR-204ENST00000545707 RCOR1Q9UKL0 485 aa18.56■□□□□ 0.56
LDLR-204ENST00000545707 RFX7Q2KHR2 1363 aa18.56■□□□□ 0.56
LDLR-204ENST00000545707 HMGB1P09429 215 aaKnown RBP18.55■□□□□ 0.56
LDLR-204ENST00000545707 CACTINQ8WUQ7 758 aaKnown RBP18.55■□□□□ 0.56
LDLR-204ENST00000545707 LLPHQ9BRT6 129 aaKnown RBP18.55■□□□□ 0.56
LDLR-204ENST00000545707 LMTK3Q96Q04 1460 aa18.55■□□□□ 0.56
LDLR-204ENST00000545707 EYA2O00167 538 aa18.55■□□□□ 0.56
LDLR-204ENST00000545707 IL15P40933 162 aaPredicted RBP18.55■□□□□ 0.56
LDLR-204ENST00000545707 SNW1Q13573 536 aaKnown RBP18.55■□□□□ 0.56
LDLR-204ENST00000545707 IQCB1Q15051 598 aa18.55■□□□□ 0.56
LDLR-204ENST00000545707 MTERF4Q7Z6M4 381 aaKnown RBP18.55■□□□□ 0.56
LDLR-204ENST00000545707 BCL11BQ9C0K0 894 aaPredicted RBP18.55■□□□□ 0.56
LDLR-204ENST00000545707 PALLDQ8WX93 1383 aa18.55■□□□□ 0.56
LDLR-204ENST00000545707 RNF113AO15541 343 aaKnown RBP18.54■□□□□ 0.56
LDLR-204ENST00000545707 ME1P48163 572 aa18.54■□□□□ 0.56
LDLR-204ENST00000545707 NAA16Q6N069 864 aaPredicted RBP18.54■□□□□ 0.56
LDLR-204ENST00000545707 ADORA1P30542 326 aa18.54■□□□□ 0.56
LDLR-204ENST00000545707 CHAF1AQ13111 956 aaPredicted RBP18.54■□□□□ 0.56
LDLR-204ENST00000545707 GJB4Q9NTQ9 266 aa18.54■□□□□ 0.56
LDLR-204ENST00000545707 FDPSP14324 419 aaKnown RBP18.53■□□□□ 0.56
LDLR-204ENST00000545707 AGXT2Q9BYV1 514 aa18.53■□□□□ 0.56
LDLR-204ENST00000545707 PRDM10Q9NQV6 1147 aa18.53■□□□□ 0.56
LDLR-204ENST00000545707 TAOK2Q9UL54 1235 aa18.53■□□□□ 0.56
LDLR-204ENST00000545707 ARFGEF2Q9Y6D5 1785 aa18.53■□□□□ 0.56
LDLR-204ENST00000545707 GOLGA6L19H0YKK7 550 aa18.53■□□□□ 0.56
LDLR-204ENST00000545707 WASHC4Q2M389 1173 aa18.52■□□□□ 0.56
LDLR-204ENST00000545707 PI16Q6UXB8 463 aa18.52■□□□□ 0.56
LDLR-204ENST00000545707 FSIP1Q8NA03 581 aa18.52■□□□□ 0.56
LDLR-204ENST00000545707 SCARF1Q14162 830 aa18.52■□□□□ 0.55
LDLR-204ENST00000545707 CCDC73Q6ZRK6 1079 aa18.52■□□□□ 0.55
LDLR-204ENST00000545707 FOXP2O15409 715 aa18.51■□□□□ 0.55
LDLR-204ENST00000545707 POLR3DP05423 398 aaPredicted RBP18.51■□□□□ 0.55
LDLR-204ENST00000545707 CCDC94Q9BW85 323 aaPredicted RBP18.51■□□□□ 0.55
LDLR-204ENST00000545707 SALL1Q9NSC2 1324 aa18.51■□□□□ 0.55
LDLR-204ENST00000545707 A0A1B0GVL5 298 aa18.51■□□□□ 0.55
LDLR-204ENST00000545707 KINO60870 393 aaKnown RBP18.51■□□□□ 0.55
LDLR-204ENST00000545707 GORABQ5T7V8 394 aa18.51■□□□□ 0.55
LDLR-204ENST00000545707 ENGASEQ8NFI3 743 aa18.51■□□□□ 0.55
LDLR-204ENST00000545707 GPR108Q9NPR9 543 aa18.51■□□□□ 0.55
LDLR-204ENST00000545707 ZNF142P52746 1687 aaPredicted RBP18.5■□□□□ 0.55
LDLR-204ENST00000545707 PPP4R3BQ5MIZ7 849 aa18.5■□□□□ 0.55
LDLR-204ENST00000545707 CARMIL3Q8ND23 1372 aa18.5■□□□□ 0.55
LDLR-204ENST00000545707 ALS2Q96Q42 1657 aa18.5■□□□□ 0.55
LDLR-204ENST00000545707 CEP126Q9P2H0 1117 aa18.5■□□□□ 0.55
LDLR-204ENST00000545707 PCDHA7Q9UN72 937 aa18.5■□□□□ 0.55
LDLR-204ENST00000545707 TMEM94Q12767 1356 aa18.5■□□□□ 0.55
LDLR-204ENST00000545707 BECN2A8MW95 431 aa18.5■□□□□ 0.55
LDLR-204ENST00000545707 STX1AQ16623 288 aa18.5■□□□□ 0.55
LDLR-204ENST00000545707 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.5■□□□□ 0.55
LDLR-204ENST00000545707 ZNF274Q96GC6 653 aaPredicted RBP18.5■□□□□ 0.55
LDLR-204ENST00000545707 ZNF396Q96N95 335 aaPredicted RBP18.5■□□□□ 0.55
LDLR-204ENST00000545707 TNNT1P13805 278 aa18.49■□□□□ 0.55
LDLR-204ENST00000545707 FAM160A1Q05DH4 1040 aa18.49■□□□□ 0.55
LDLR-204ENST00000545707 FILIP1Q7Z7B0 1213 aa18.49■□□□□ 0.55
LDLR-204ENST00000545707 CCDC191Q8NCU4 936 aa18.49■□□□□ 0.55
LDLR-204ENST00000545707 CLIC4Q9Y696 253 aa18.49■□□□□ 0.55
LDLR-204ENST00000545707 MST1RQ04912 1400 aa18.49■□□□□ 0.55
LDLR-204ENST00000545707 FGAP02671 866 aa18.49■□□□□ 0.55
LDLR-204ENST00000545707 CBX1P83916 185 aa18.49■□□□□ 0.55
LDLR-204ENST00000545707 TTC39AQ5SRH9 613 aa18.49■□□□□ 0.55
LDLR-204ENST00000545707 TOM1L2Q6ZVM7 507 aa18.49■□□□□ 0.55
LDLR-204ENST00000545707 DHX40Q8IX18 779 aaKnown RBP18.49■□□□□ 0.55
LDLR-204ENST00000545707 SYNE4Q8N205 404 aa18.49■□□□□ 0.55
LDLR-204ENST00000545707 ZCRB1Q8TBF4 217 aaKnown RBP18.49■□□□□ 0.55
LDLR-204ENST00000545707 FAM89AQ96GI7 184 aa18.49■□□□□ 0.55
LDLR-204ENST00000545707 XAGE2Q96GT9 111 aa18.49■□□□□ 0.55
LDLR-204ENST00000545707 PUS7LQ9H0K6 701 aaKnown RBP18.49■□□□□ 0.55
LDLR-204ENST00000545707 LAMA4Q16363 1823 aa18.48■□□□□ 0.55
LDLR-204ENST00000545707 USP27XA6NNY8 438 aa18.48■□□□□ 0.55
LDLR-204ENST00000545707 NAA30Q147X3 362 aaPredicted RBP18.48■□□□□ 0.55
LDLR-204ENST00000545707 TPD52L1Q16890 204 aaPredicted RBP18.48■□□□□ 0.55
LDLR-204ENST00000545707 ZAP70P43403 619 aa18.48■□□□□ 0.55
LDLR-204ENST00000545707 ATP2B3Q16720 1220 aa18.48■□□□□ 0.55
LDLR-204ENST00000545707 CCDC57Q2TAC2 916 aa18.48■□□□□ 0.55
LDLR-204ENST00000545707 AOPEPQ8N6M6 819 aa18.48■□□□□ 0.55
LDLR-204ENST00000545707 DENND2AQ9ULE3 1009 aa18.48■□□□□ 0.55
LDLR-204ENST00000545707 COL18A1P39060 1754 aa18.47■□□□□ 0.55
LDLR-204ENST00000545707 NDUFA8P51970 172 aa18.47■□□□□ 0.55
LDLR-204ENST00000545707 LRRC8AQ8IWT6 810 aa18.47■□□□□ 0.55
LDLR-204ENST00000545707 ZNF592Q92610 1267 aa18.47■□□□□ 0.55
LDLR-204ENST00000545707 PKNOX2Q96KN3 472 aa18.47■□□□□ 0.55
LDLR-204ENST00000545707 SDF4Q9BRK5 362 aa18.47■□□□□ 0.55
LDLR-204ENST00000545707 GLI3P10071 1580 aa18.47■□□□□ 0.55
LDLR-204ENST00000545707 KLF18A0A0U1RQI7 1052 aa18.47■□□□□ 0.55
LDLR-204ENST00000545707 SPDYE4A6NLX3 237 aa18.47■□□□□ 0.55
LDLR-204ENST00000545707 CTAGE5O15320 804 aa18.47■□□□□ 0.55
LDLR-204ENST00000545707 CCDC158Q5M9N0 1113 aa18.47■□□□□ 0.55
LDLR-204ENST00000545707 PRC1O43663 620 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms