RNA–Protein interactions for RNA: ENST00000545367.5

NPIPB4-221, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-221ENST00000545367 THUMPD2Q9BTF0 503 aaKnown RBP11.34□□□□□ -0.59
NPIPB4-221ENST00000545367 STK24Q9Y6E0 443 aa11.34□□□□□ -0.59
NPIPB4-221ENST00000545367 ZNF609O15014 1411 aa11.34□□□□□ -0.59
NPIPB4-221ENST00000545367 PER1O15534 1290 aaPredicted RBP11.33□□□□□ -0.6
NPIPB4-221ENST00000545367 ANXA1P04083 346 aa11.33□□□□□ -0.6
NPIPB4-221ENST00000545367 TAF7Q15545 349 aaPredicted RBP11.33□□□□□ -0.6
NPIPB4-221ENST00000545367 DOK7Q18PE1 504 aa11.33□□□□□ -0.6
NPIPB4-221ENST00000545367 WASHC4Q2M389 1173 aa11.33□□□□□ -0.6
NPIPB4-221ENST00000545367 ANGEL2Q5VTE6 544 aaKnown RBP11.33□□□□□ -0.6
NPIPB4-221ENST00000545367 KCNQ5Q9NR82 932 aa11.33□□□□□ -0.6
NPIPB4-221ENST00000545367 SCAF8Q9UPN6 1271 aaKnown RBP11.33□□□□□ -0.6
NPIPB4-221ENST00000545367 CUL9Q8IWT3 2517 aa11.33□□□□□ -0.6
NPIPB4-221ENST00000545367 ERBB4Q15303 1308 aa11.33□□□□□ -0.6
NPIPB4-221ENST00000545367 POTEFA5A3E0 1075 aa11.32□□□□□ -0.6
NPIPB4-221ENST00000545367 C6orf229H3BNL8 230 aa11.32□□□□□ -0.6
NPIPB4-221ENST00000545367 GPR25O00155 361 aa11.32□□□□□ -0.6
NPIPB4-221ENST00000545367 EIF4A1P60842 406 aaKnown RBP11.32□□□□□ -0.6
NPIPB4-221ENST00000545367 PROSER3Q2NL68 480 aa11.32□□□□□ -0.6
NPIPB4-221ENST00000545367 SLC10A5Q5PT55 438 aa11.32□□□□□ -0.6
NPIPB4-221ENST00000545367 MYH3P11055 1940 aa11.32□□□□□ -0.6
NPIPB4-221ENST00000545367 SH3TC1Q8TE82 1336 aa11.32□□□□□ -0.6
NPIPB4-221ENST00000545367 ZSWIM8A7E2V4 1837 aa11.31□□□□□ -0.6
NPIPB4-221ENST00000545367 HTATSF1O43719 755 aaKnown RBP11.31□□□□□ -0.6
NPIPB4-221ENST00000545367 GPSM2P81274 684 aa11.31□□□□□ -0.6
NPIPB4-221ENST00000545367 TTLL12Q14166 644 aaPredicted RBP11.31□□□□□ -0.6
NPIPB4-221ENST00000545367 TMEM132AQ24JP5 1023 aa11.31□□□□□ -0.6
NPIPB4-221ENST00000545367 NLRP10Q86W26 655 aa11.31□□□□□ -0.6
NPIPB4-221ENST00000545367 NSFL1CQ9UNZ2 370 aaKnown RBP11.31□□□□□ -0.6
NPIPB4-221ENST00000545367 NUDCQ9Y266 331 aa11.31□□□□□ -0.6
NPIPB4-221ENST00000545367 COL6A3P12111 3177 aa11.3□□□□□ -0.6
NPIPB4-221ENST00000545367 SEC24BO95487 1268 aa11.3□□□□□ -0.6
NPIPB4-221ENST00000545367 PLCG2P16885 1265 aa11.3□□□□□ -0.6
NPIPB4-221ENST00000545367 FKBP1BP68106 108 aa11.3□□□□□ -0.6
NPIPB4-221ENST00000545367 TMC4Q7Z404 712 aa11.3□□□□□ -0.6
NPIPB4-221ENST00000545367 LRP10Q7Z4F1 713 aa11.3□□□□□ -0.6
NPIPB4-221ENST00000545367 EFCAB3Q8N7B9 438 aa11.3□□□□□ -0.6
NPIPB4-221ENST00000545367 PNISRQ8TF01 805 aaKnown RBP11.3□□□□□ -0.6
NPIPB4-221ENST00000545367 CELF1Q92879 486 aaKnown RBP11.3□□□□□ -0.6
NPIPB4-221ENST00000545367 OCEL1Q9H607 264 aa11.3□□□□□ -0.6
NPIPB4-221ENST00000545367 POLLQ9UGP5 575 aa11.3□□□□□ -0.6
NPIPB4-221ENST00000545367 TRMT112Q9UI30 125 aaKnown RBP11.3□□□□□ -0.6
NPIPB4-221ENST00000545367 UBE2Q2LH0YL09 131 aa11.29□□□□□ -0.6
NPIPB4-221ENST00000545367 FKTNO75072 461 aa11.29□□□□□ -0.6
NPIPB4-221ENST00000545367 SCARF1Q14162 830 aa11.29□□□□□ -0.6
NPIPB4-221ENST00000545367 CLSPNQ9HAW4 1339 aa11.29□□□□□ -0.6
NPIPB4-221ENST00000545367 EIF2S2P20042 333 aaKnown RBP11.28□□□□□ -0.6
NPIPB4-221ENST00000545367 SREBF2Q12772 1141 aa11.28□□□□□ -0.6
NPIPB4-221ENST00000545367 HSP90AB3PQ58FF7 597 aa11.28□□□□□ -0.6
NPIPB4-221ENST00000545367 NOM1Q5C9Z4 860 aaKnown RBP11.28□□□□□ -0.6
NPIPB4-221ENST00000545367 EYA3Q99504 573 aa11.28□□□□□ -0.6
NPIPB4-221ENST00000545367 R3HDMLQ9H3Y0 253 aa11.28□□□□□ -0.6
NPIPB4-221ENST00000545367 TRIM17Q9Y577 477 aa11.28□□□□□ -0.6
NPIPB4-221ENST00000545367 PITPNM2Q9BZ72 1349 aa11.28□□□□□ -0.6
NPIPB4-221ENST00000545367 A0A1B0GUL6 1792 aa11.28□□□□□ -0.6
NPIPB4-221ENST00000545367 UFL1O94874 794 aa11.27□□□□□ -0.61
NPIPB4-221ENST00000545367 ZNF280AP59817 542 aaPredicted RBP11.27□□□□□ -0.61
NPIPB4-221ENST00000545367 AIMP1Q12904 312 aaKnown RBP11.27□□□□□ -0.61
NPIPB4-221ENST00000545367 PDIA6Q15084 440 aa11.27□□□□□ -0.61
NPIPB4-221ENST00000545367 PRAMEF18Q5VWM3 479 aa11.27□□□□□ -0.61
NPIPB4-221ENST00000545367 RSBN1LQ6PCB5 846 aaPredicted RBP11.27□□□□□ -0.61
NPIPB4-221ENST00000545367 TBC1D16Q8TBP0 767 aa11.27□□□□□ -0.61
NPIPB4-221ENST00000545367 NECTIN2Q92692 538 aa11.27□□□□□ -0.61
NPIPB4-221ENST00000545367 MYOZ2Q9NPC6 264 aa11.27□□□□□ -0.61
NPIPB4-221ENST00000545367 COLQQ9Y215 455 aaPredicted RBP11.27□□□□□ -0.61
NPIPB4-221ENST00000545367 LAMA3Q16787 3333 aa11.27□□□□□ -0.61
NPIPB4-221ENST00000545367 G3V3G9 751 aa11.26□□□□□ -0.61
NPIPB4-221ENST00000545367 VIL1P09327 827 aaKnown RBP11.26□□□□□ -0.61
NPIPB4-221ENST00000545367 PDCD7Q8N8D1 485 aaKnown RBP11.26□□□□□ -0.61
NPIPB4-221ENST00000545367 XAGE3Q8WTP9 111 aa11.26□□□□□ -0.61
NPIPB4-221ENST00000545367 PCGF6Q9BYE7 350 aa11.26□□□□□ -0.61
NPIPB4-221ENST00000545367 TSPYL4Q9UJ04 414 aa11.26□□□□□ -0.61
NPIPB4-221ENST00000545367 A0A0C4DFX4 3053 aa11.25□□□□□ -0.61
NPIPB4-221ENST00000545367 TM4SF4P48230 202 aa11.25□□□□□ -0.61
NPIPB4-221ENST00000545367 RTL5Q5HYW3 569 aaPredicted RBP11.25□□□□□ -0.61
NPIPB4-221ENST00000545367 OTOP1Q7RTM1 612 aa11.25□□□□□ -0.61
NPIPB4-221ENST00000545367 SSC5DA1L4H1 1573 aa11.24□□□□□ -0.61
NPIPB4-221ENST00000545367 SASH1O94885 1247 aa11.24□□□□□ -0.61
NPIPB4-221ENST00000545367 NEFMP07197 916 aa11.24□□□□□ -0.61
NPIPB4-221ENST00000545367 USP17L8P0C7I0 530 aa11.24□□□□□ -0.61
NPIPB4-221ENST00000545367 EN2P19622 333 aaPredicted RBP11.24□□□□□ -0.61
NPIPB4-221ENST00000545367 PPP2R1AP30153 589 aa11.24□□□□□ -0.61
NPIPB4-221ENST00000545367 TCIRG1Q13488 830 aa11.24□□□□□ -0.61
NPIPB4-221ENST00000545367 PRKG1Q13976 671 aa11.24□□□□□ -0.61
NPIPB4-221ENST00000545367 COPS6Q7L5N1 327 aa11.24□□□□□ -0.61
NPIPB4-221ENST00000545367 CFHR5Q9BXR6 569 aa11.24□□□□□ -0.61
NPIPB4-221ENST00000545367 ZC3H12CQ9C0D7 883 aaKnown RBP11.24□□□□□ -0.61
NPIPB4-221ENST00000545367 NF2P35240 595 aa11.23□□□□□ -0.61
NPIPB4-221ENST00000545367 NFE2L2Q16236 605 aa11.23□□□□□ -0.61
NPIPB4-221ENST00000545367 NBPF9Q3BBW0 867 aa11.23□□□□□ -0.61
NPIPB4-221ENST00000545367 INTS3Q68E01 1043 aaKnown RBP11.23□□□□□ -0.61
NPIPB4-221ENST00000545367 AGBL3Q8NEM8 1001 aa11.23□□□□□ -0.61
NPIPB4-221ENST00000545367 FAM89AQ96GI7 184 aa11.23□□□□□ -0.61
NPIPB4-221ENST00000545367 ANKIB1Q9P2G1 1089 aa11.23□□□□□ -0.61
NPIPB4-221ENST00000545367 GGA1Q9UJY5 639 aa11.23□□□□□ -0.61
NPIPB4-221ENST00000545367 MAPK8IP3Q9UPT6 1336 aa11.23□□□□□ -0.61
NPIPB4-221ENST00000545367 ATP5J2-PTCD1G3V325 749 aa11.22□□□□□ -0.61
NPIPB4-221ENST00000545367 COL1A1P02452 1464 aaPredicted RBP11.22□□□□□ -0.61
NPIPB4-221ENST00000545367 PTPN12Q05209 780 aaKnown RBP11.22□□□□□ -0.61
NPIPB4-221ENST00000545367 SF3B3Q15393 1217 aaKnown RBP11.22□□□□□ -0.61
NPIPB4-221ENST00000545367 LHX8Q68G74 356 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms