RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 PTPRUQ92729 1446 aa10.12□□□□□ -0.79
CCDC7-210ENST00000545067 ANKRD18BA2A2Z9 1011 aa10.11□□□□□ -0.79
CCDC7-210ENST00000545067 ZAP70P43403 619 aa10.11□□□□□ -0.79
CCDC7-210ENST00000545067 STX1AQ16623 288 aa10.11□□□□□ -0.79
CCDC7-210ENST00000545067 DNAJC10Q8IXB1 793 aa10.11□□□□□ -0.79
CCDC7-210ENST00000545067 NCOA7Q8NI08 942 aa10.11□□□□□ -0.79
CCDC7-210ENST00000545067 ACSBG1Q96GR2 724 aa10.11□□□□□ -0.79
CCDC7-210ENST00000545067 USP28Q96RU2 1077 aa10.11□□□□□ -0.79
CCDC7-210ENST00000545067 GOLGA8AA7E2F4 631 aa10.11□□□□□ -0.79
CCDC7-210ENST00000545067 ADORA1P30542 326 aa10.11□□□□□ -0.79
CCDC7-210ENST00000545067 METAP2P50579 478 aaKnown RBP eCLIP10.11□□□□□ -0.79
CCDC7-210ENST00000545067 TMEM67Q5HYA8 995 aa10.11□□□□□ -0.79
CCDC7-210ENST00000545067 SPECC1Q5M775 1068 aa10.11□□□□□ -0.79
CCDC7-210ENST00000545067 CADPS2Q86UW7 1296 aa10.11□□□□□ -0.79
CCDC7-210ENST00000545067 CCDC34Q96HJ3 373 aa10.11□□□□□ -0.79
CCDC7-210ENST00000545067 SFPQP23246 707 aaKnown RBP eCLIP10.11□□□□□ -0.79
CCDC7-210ENST00000545067 SCRN1Q12765 414 aa10.11□□□□□ -0.79
CCDC7-210ENST00000545067 MTERF4Q7Z6M4 381 aaKnown RBP10.11□□□□□ -0.79
CCDC7-210ENST00000545067 TRIM22Q8IYM9 498 aa10.11□□□□□ -0.79
CCDC7-210ENST00000545067 MIGA1Q8NAN2 632 aa10.11□□□□□ -0.79
CCDC7-210ENST00000545067 GTF3C6Q969F1 213 aa10.11□□□□□ -0.79
CCDC7-210ENST00000545067 XAGE2Q96GT9 111 aa10.11□□□□□ -0.79
CCDC7-210ENST00000545067 ALG1Q9BT22 464 aa10.11□□□□□ -0.79
CCDC7-210ENST00000545067 ZNF500O60304 480 aaPredicted RBP10.11□□□□□ -0.79
CCDC7-210ENST00000545067 COL9A3Q14050 684 aaPredicted RBP10.11□□□□□ -0.79
CCDC7-210ENST00000545067 PHKBQ93100 1093 aa10.11□□□□□ -0.79
CCDC7-210ENST00000545067 ERBB3P21860 1342 aa10.1□□□□□ -0.79
CCDC7-210ENST00000545067 CDC42BPGQ6DT37 1551 aa10.1□□□□□ -0.79
CCDC7-210ENST00000545067 E7EWF7 191 aa10.1□□□□□ -0.79
CCDC7-210ENST00000545067 PTPN21Q16825 1174 aa10.1□□□□□ -0.79
CCDC7-210ENST00000545067 JMYQ8N9B5 988 aa10.1□□□□□ -0.79
CCDC7-210ENST00000545067 CPLX3Q8WVH0 158 aa10.1□□□□□ -0.79
CCDC7-210ENST00000545067 MRPS27Q92552 414 aaKnown RBP10.1□□□□□ -0.79
CCDC7-210ENST00000545067 UBAC1Q9BSL1 405 aa10.1□□□□□ -0.79
CCDC7-210ENST00000545067 SLC12A7Q9Y666 1083 aa10.1□□□□□ -0.79
CCDC7-210ENST00000545067 B4E1Z4 1266 aa10.1□□□□□ -0.79
CCDC7-210ENST00000545067 RIOK3O14730 519 aaKnown RBP10.1□□□□□ -0.79
CCDC7-210ENST00000545067 IARSP41252 1262 aaKnown RBP10.1□□□□□ -0.79
CCDC7-210ENST00000545067 SYNE4Q8N205 404 aa10.1□□□□□ -0.79
CCDC7-210ENST00000545067 CYP27B1O15528 508 aa10.1□□□□□ -0.79
CCDC7-210ENST00000545067 RANBP6O60518 1105 aaKnown RBP10.1□□□□□ -0.79
CCDC7-210ENST00000545067 HSPD1P10809 573 aaKnown RBP10.09□□□□□ -0.79
CCDC7-210ENST00000545067 ZSCAN25Q6NSZ9 544 aa10.09□□□□□ -0.79
CCDC7-210ENST00000545067 NACAP1Q9BZK3 213 aa10.09□□□□□ -0.79
CCDC7-210ENST00000545067 JAG2Q9Y219 1238 aa10.09□□□□□ -0.79
CCDC7-210ENST00000545067 SPTLC2O15270 562 aa10.09□□□□□ -0.79
CCDC7-210ENST00000545067 PDIA4P13667 645 aaKnown RBP10.09□□□□□ -0.79
CCDC7-210ENST00000545067 CNNM3Q8NE01 707 aa10.09□□□□□ -0.79
CCDC7-210ENST00000545067 CLSTN2Q9H4D0 955 aa10.09□□□□□ -0.79
CCDC7-210ENST00000545067 COPRSQ9NQ92 184 aa10.09□□□□□ -0.79
CCDC7-210ENST00000545067 SNAP23O00161 211 aa10.09□□□□□ -0.79
CCDC7-210ENST00000545067 TOB2Q14106 344 aaPredicted RBP10.09□□□□□ -0.79
CCDC7-210ENST00000545067 HOOK1Q9UJC3 728 aaKnown RBP10.09□□□□□ -0.79
CCDC7-210ENST00000545067 NEURL4Q96JN8 1562 aa10.09□□□□□ -0.79
CCDC7-210ENST00000545067 GPAA1O43292 621 aa10.08□□□□□ -0.8
CCDC7-210ENST00000545067 IL2RBP14784 551 aa10.08□□□□□ -0.8
CCDC7-210ENST00000545067 CMTR1Q8N1G2 835 aaKnown RBP10.08□□□□□ -0.8
CCDC7-210ENST00000545067 PDLIM2Q96JY6 352 aa10.08□□□□□ -0.8
CCDC7-210ENST00000545067 IFNKQ9P0W0 207 aa10.08□□□□□ -0.8
CCDC7-210ENST00000545067 MRVI1Q9Y6F6 885 aa10.08□□□□□ -0.8
CCDC7-210ENST00000545067 SALL3Q9BXA9 1300 aa10.08□□□□□ -0.8
CCDC7-210ENST00000545067 A0A0G2JLW4 131 aa10.08□□□□□ -0.8
CCDC7-210ENST00000545067 ADD1P35611 737 aaKnown RBP10.08□□□□□ -0.8
CCDC7-210ENST00000545067 SYKP43405 635 aa10.08□□□□□ -0.8
CCDC7-210ENST00000545067 CEP135Q66GS9 1140 aa10.08□□□□□ -0.8
CCDC7-210ENST00000545067 PRIMPOLQ96LW4 560 aa10.08□□□□□ -0.8
CCDC7-210ENST00000545067 PCMTD1Q96MG8 357 aaPredicted RBP10.08□□□□□ -0.8
CCDC7-210ENST00000545067 hCG_1642624A0A1W2PR95 340 aa10.08□□□□□ -0.8
CCDC7-210ENST00000545067 IRS4O14654 1257 aaPredicted RBP10.08□□□□□ -0.8
CCDC7-210ENST00000545067 CTAGE5O15320 804 aa10.08□□□□□ -0.8
CCDC7-210ENST00000545067 CDKL5O76039 1030 aa10.08□□□□□ -0.8
CCDC7-210ENST00000545067 ITGA6P23229 1130 aa10.08□□□□□ -0.8
CCDC7-210ENST00000545067 MAP3K12Q12852 859 aa10.08□□□□□ -0.8
CCDC7-210ENST00000545067 HAUS7Q99871 368 aa10.08□□□□□ -0.8
CCDC7-210ENST00000545067 RPAP1Q9BWH6 1393 aaPredicted RBP10.08□□□□□ -0.8
CCDC7-210ENST00000545067 ZBTB43O43298 467 aa10.07□□□□□ -0.8
CCDC7-210ENST00000545067 URI1O94763 535 aaPredicted RBP10.07□□□□□ -0.8
CCDC7-210ENST00000545067 ZNF75DP51815 510 aa10.07□□□□□ -0.8
CCDC7-210ENST00000545067 KAZALD1Q96I82 304 aa10.07□□□□□ -0.8
CCDC7-210ENST00000545067 ARID5BQ14865 1188 aa10.07□□□□□ -0.8
CCDC7-210ENST00000545067 ZSWIM4Q9H7M6 989 aa10.07□□□□□ -0.8
CCDC7-210ENST00000545067 FGAP02671 866 aa10.07□□□□□ -0.8
CCDC7-210ENST00000545067 IGHMBP2P38935 993 aaKnown RBP10.07□□□□□ -0.8
CCDC7-210ENST00000545067 MAGEB6Q8N7X4 407 aa10.07□□□□□ -0.8
CCDC7-210ENST00000545067 ASAP1Q9ULH1 1129 aa10.07□□□□□ -0.8
CCDC7-210ENST00000545067 DLC1Q96QB1 1528 aa10.06□□□□□ -0.8
CCDC7-210ENST00000545067 MTX1Q13505 466 aa10.06□□□□□ -0.8
CCDC7-210ENST00000545067 CCDC24Q8N4L8 307 aa10.06□□□□□ -0.8
CCDC7-210ENST00000545067 KIF18AQ8NI77 898 aa10.06□□□□□ -0.8
CCDC7-210ENST00000545067 AIFM3Q96NN9 605 aa10.06□□□□□ -0.8
CCDC7-210ENST00000545067 USP32Q8NFA0 1604 aa10.06□□□□□ -0.8
CCDC7-210ENST00000545067 OSBP2Q969R2 916 aa10.06□□□□□ -0.8
CCDC7-210ENST00000545067 HELLSQ9NRZ9 838 aa10.06□□□□□ -0.8
CCDC7-210ENST00000545067 EPB41L2O43491 1005 aaKnown RBP10.06□□□□□ -0.8
CCDC7-210ENST00000545067 PRDM1O75626 825 aa10.06□□□□□ -0.8
CCDC7-210ENST00000545067 U2AF2P26368 475 aaKnown RBP eCLIP10.06□□□□□ -0.8
CCDC7-210ENST00000545067 AFMP43652 599 aa10.06□□□□□ -0.8
CCDC7-210ENST00000545067 FAM160A1Q05DH4 1040 aa10.06□□□□□ -0.8
CCDC7-210ENST00000545067 C11orf57Q6ZUT1 292 aaPredicted RBP10.06□□□□□ -0.8
CCDC7-210ENST00000545067 NRKQ7Z2Y5 1582 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms