RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 PDE6BP35913 854 aa8.53□□□□□ -1.04
HMGCS2-204ENST00000544913 LPIN2Q92539 896 aa8.53□□□□□ -1.04
HMGCS2-204ENST00000544913 RBM17Q96I25 401 aaKnown RBP8.53□□□□□ -1.04
HMGCS2-204ENST00000544913 ZNF512BQ96KM6 892 aaPredicted RBP8.53□□□□□ -1.04
HMGCS2-204ENST00000544913 TBC1D32Q96NH3 1257 aa8.53□□□□□ -1.04
HMGCS2-204ENST00000544913 ATF5Q9Y2D1 282 aaPredicted RBP8.53□□□□□ -1.04
HMGCS2-204ENST00000544913 AKAP2Q9Y2D5 859 aa8.53□□□□□ -1.04
HMGCS2-204ENST00000544913 CACNA1SQ13698 1873 aa8.53□□□□□ -1.04
HMGCS2-204ENST00000544913 BBOX1O75936 387 aa8.52□□□□□ -1.04
HMGCS2-204ENST00000544913 MAP4K4O95819 1239 aaPredicted RBP8.52□□□□□ -1.04
HMGCS2-204ENST00000544913 CHGBP05060 677 aa8.52□□□□□ -1.04
HMGCS2-204ENST00000544913 MCAMP43121 646 aa8.52□□□□□ -1.04
HMGCS2-204ENST00000544913 GPSM2P81274 684 aa8.52□□□□□ -1.04
HMGCS2-204ENST00000544913 UBE4AQ14139 1066 aa8.52□□□□□ -1.04
HMGCS2-204ENST00000544913 CCDC102BQ68D86 513 aa8.52□□□□□ -1.04
HMGCS2-204ENST00000544913 STYK1Q6J9G0 422 aa8.52□□□□□ -1.04
HMGCS2-204ENST00000544913 C2CD5Q86YS7 1000 aa8.52□□□□□ -1.04
HMGCS2-204ENST00000544913 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.52□□□□□ -1.04
HMGCS2-204ENST00000544913 MASTLQ96GX5 879 aa8.52□□□□□ -1.04
HMGCS2-204ENST00000544913 NEUROD6Q96NK8 337 aa8.52□□□□□ -1.04
HMGCS2-204ENST00000544913 BOLA2Q9H3K6 86 aa8.52□□□□□ -1.04
HMGCS2-204ENST00000544913 PODXL2Q9NZ53 605 aa8.52□□□□□ -1.04
HMGCS2-204ENST00000544913 ATP6V0A2Q9Y487 856 aa8.52□□□□□ -1.04
HMGCS2-204ENST00000544913 AK9Q5TCS8 1911 aa8.52□□□□□ -1.04
HMGCS2-204ENST00000544913 ZBTB22O15209 634 aa8.52□□□□□ -1.05
HMGCS2-204ENST00000544913 RASGRF1Q13972 1273 aa8.52□□□□□ -1.05
HMGCS2-204ENST00000544913 NBR1Q14596 966 aa8.52□□□□□ -1.05
HMGCS2-204ENST00000544913 C15orf52Q6ZUT6 534 aaKnown RBP8.52□□□□□ -1.05
HMGCS2-204ENST00000544913 ANTXR1Q9H6X2 564 aa8.52□□□□□ -1.05
HMGCS2-204ENST00000544913 DOCK2Q92608 1830 aa8.51□□□□□ -1.05
HMGCS2-204ENST00000544913 MYO5AQ9Y4I1 1855 aaKnown RBP8.51□□□□□ -1.05
HMGCS2-204ENST00000544913 PPEF1O14829 653 aaPredicted RBP8.51□□□□□ -1.05
HMGCS2-204ENST00000544913 ERC2O15083 957 aa8.51□□□□□ -1.05
HMGCS2-204ENST00000544913 CDC45O75419 566 aa8.51□□□□□ -1.05
HMGCS2-204ENST00000544913 CHMLP26374 656 aa8.51□□□□□ -1.05
HMGCS2-204ENST00000544913 BCAMP50895 628 aa8.51□□□□□ -1.05
HMGCS2-204ENST00000544913 PRPF40BQ6NWY9 871 aaKnown RBP8.51□□□□□ -1.05
HMGCS2-204ENST00000544913 FBXO33Q7Z6M2 555 aa8.51□□□□□ -1.05
HMGCS2-204ENST00000544913 FAM84BQ96KN1 310 aaPredicted RBP8.51□□□□□ -1.05
HMGCS2-204ENST00000544913 GPR101Q96P66 508 aaPredicted RBP8.51□□□□□ -1.05
HMGCS2-204ENST00000544913 ANKRD2Q9GZV1 360 aa8.51□□□□□ -1.05
HMGCS2-204ENST00000544913 POLLQ9UGP5 575 aa8.51□□□□□ -1.05
HMGCS2-204ENST00000544913 XDHP47989 1333 aa8.51□□□□□ -1.05
HMGCS2-204ENST00000544913 ZNF646O15015 1829 aaPredicted RBP8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 SLC5A1P13866 664 aa8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 DPEP1P16444 411 aa8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 GYG1P46976 350 aa8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 SP8Q8IXZ3 490 aa8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 GPATCH3Q96I76 525 aa8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 HMG20BQ9P0W2 317 aa8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 RFX7Q2KHR2 1363 aa8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 A0A0G2JLW4 131 aa8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 H0YIN7 160 aa8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 CYP2E1P05181 493 aaPredicted RBP8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 ZAP70P43403 619 aa8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 SLFNL1Q499Z3 407 aa8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 TMC4Q7Z404 712 aa8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 TBC1D16Q8TBP0 767 aa8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 EVI5LQ96CN4 794 aa8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 C22orf23Q9BZE7 217 aa8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 PIH1D3Q9NQM4 214 aaKnown RBP8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 SNRKQ9NRH2 765 aa8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 CHD4Q14839 1912 aa8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 COL4A5P29400 1685 aa8.5□□□□□ -1.05
HMGCS2-204ENST00000544913 IFIT1P09914 478 aaKnown RBP8.49□□□□□ -1.05
HMGCS2-204ENST00000544913 LEMD3Q9Y2U8 911 aa8.49□□□□□ -1.05
HMGCS2-204ENST00000544913 MED23Q9ULK4 1368 aa8.49□□□□□ -1.05
HMGCS2-204ENST00000544913 A0A0D9SFI3 127 aa8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 GOLIM4O00461 696 aa8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 TTC39AQ5SRH9 613 aa8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 KBTBD3Q8NAB2 608 aa8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 ZNF384Q8TF68 577 aa8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 RILPL2Q969X0 211 aa8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 DNAJC2Q99543 621 aaKnown RBP8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 ESYT1Q9BSJ8 1104 aa8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 RTFDC1Q9BY42 306 aaPredicted RBP8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 PAG1Q9NWQ8 432 aa8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 UTRNP46939 3433 aa8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 TRIM6-TRIM34B2RNG4 842 aa8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 UFL1O94874 794 aa8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 ALDH1B1P30837 517 aa8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 DEKP35659 375 aaKnown RBP8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 RBM25P49756 843 aaKnown RBP8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 CCDC158Q5M9N0 1113 aa8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 CNTROBQ8N137 903 aa8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 SPATA5Q8NB90 893 aa8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 CNKSR1Q969H4 720 aa8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 ZNF622Q969S3 477 aaKnown RBP eCLIP8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 FAM227BQ96M60 508 aa8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 NSFL1CQ9UNZ2 370 aaKnown RBP8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 IQSEC3Q9UPP2 1182 aaPredicted RBP8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 PDS5AQ29RF7 1337 aaKnown RBP8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 MYH7P12883 1935 aa8.48□□□□□ -1.05
HMGCS2-204ENST00000544913 SCN9AQ15858 1988 aa8.47□□□□□ -1.05
HMGCS2-204ENST00000544913 FOXP2O15409 715 aa8.47□□□□□ -1.05
HMGCS2-204ENST00000544913 SGSM2O43147 1006 aa8.47□□□□□ -1.05
HMGCS2-204ENST00000544913 UQCRFS1P1P0C7P4 283 aa8.47□□□□□ -1.05
HMGCS2-204ENST00000544913 ATP2B4P23634 1241 aa8.47□□□□□ -1.05
HMGCS2-204ENST00000544913 POLD1P28340 1107 aa8.47□□□□□ -1.05
HMGCS2-204ENST00000544913 TGFB2P61812 414 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms