RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 IMMTQ16891 758 aaKnown RBP14.66□□□□□ -0.06
PAAF1-215ENST00000544909 STOX1Q6ZVD7 989 aa14.66□□□□□ -0.06
PAAF1-215ENST00000544909 SEC62Q99442 399 aaKnown RBP14.66□□□□□ -0.06
PAAF1-215ENST00000544909 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.66□□□□□ -0.06
PAAF1-215ENST00000544909 ZBTB3Q9H5J0 574 aa14.66□□□□□ -0.06
PAAF1-215ENST00000544909 RCOR1Q9UKL0 485 aa14.66□□□□□ -0.06
PAAF1-215ENST00000544909 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.66□□□□□ -0.06
PAAF1-215ENST00000544909 STRCQ7RTU9 1775 aa14.65□□□□□ -0.06
PAAF1-215ENST00000544909 TIMM10P62072 90 aa14.65□□□□□ -0.06
PAAF1-215ENST00000544909 TYRO3Q06418 890 aa14.65□□□□□ -0.06
PAAF1-215ENST00000544909 LRRC24Q50LG9 513 aa14.65□□□□□ -0.06
PAAF1-215ENST00000544909 CCDC129Q6ZRS4 1044 aa14.65□□□□□ -0.06
PAAF1-215ENST00000544909 MTERF4Q7Z6M4 381 aaKnown RBP14.65□□□□□ -0.06
PAAF1-215ENST00000544909 TCEANC2Q96MN5 208 aa14.65□□□□□ -0.06
PAAF1-215ENST00000544909 MAP7D2Q96T17 732 aa14.65□□□□□ -0.06
PAAF1-215ENST00000544909 SPTLC3Q9NUV7 552 aa14.65□□□□□ -0.06
PAAF1-215ENST00000544909 ZMYM6O95789 1325 aa14.65□□□□□ -0.06
PAAF1-215ENST00000544909 COL14A1Q05707 1796 aaKnown RBP14.64□□□□□ -0.07
PAAF1-215ENST00000544909 ERVV-1B6SEH8 477 aa14.64□□□□□ -0.07
PAAF1-215ENST00000544909 TTC39AQ5SRH9 613 aa14.64□□□□□ -0.07
PAAF1-215ENST00000544909 FERMT3Q86UX7 667 aa14.64□□□□□ -0.07
PAAF1-215ENST00000544909 DDX54Q8TDD1 881 aaKnown RBP14.64□□□□□ -0.07
PAAF1-215ENST00000544909 JARID2Q92833 1246 aaPredicted RBP14.64□□□□□ -0.07
PAAF1-215ENST00000544909 PRIMPOLQ96LW4 560 aa14.64□□□□□ -0.07
PAAF1-215ENST00000544909 DACT1Q9NYF0 836 aa14.64□□□□□ -0.07
PAAF1-215ENST00000544909 MYH7P12883 1935 aa14.64□□□□□ -0.07
PAAF1-215ENST00000544909 BCL9O00512 1426 aa14.64□□□□□ -0.07
PAAF1-215ENST00000544909 PTPDC1A2A3K4 754 aa14.64□□□□□ -0.07
PAAF1-215ENST00000544909 COL9A3Q14050 684 aaPredicted RBP14.64□□□□□ -0.07
PAAF1-215ENST00000544909 SASS6Q6UVJ0 657 aa14.64□□□□□ -0.07
PAAF1-215ENST00000544909 CICQ96RK0 1608 aaPredicted RBP14.64□□□□□ -0.07
PAAF1-215ENST00000544909 RIC1Q4ADV7 1423 aa14.63□□□□□ -0.07
PAAF1-215ENST00000544909 MYH3P11055 1940 aa14.63□□□□□ -0.07
PAAF1-215ENST00000544909 DYNC1I1O14576 645 aa14.63□□□□□ -0.07
PAAF1-215ENST00000544909 JAK2O60674 1132 aa14.63□□□□□ -0.07
PAAF1-215ENST00000544909 LIG1P18858 919 aa14.63□□□□□ -0.07
PAAF1-215ENST00000544909 EVA1CP58658 441 aa14.63□□□□□ -0.07
PAAF1-215ENST00000544909 STK3Q13188 491 aa14.63□□□□□ -0.07
PAAF1-215ENST00000544909 GORABQ5T7V8 394 aa14.63□□□□□ -0.07
PAAF1-215ENST00000544909 TDRD7Q8NHU6 1098 aaKnown RBP14.63□□□□□ -0.07
PAAF1-215ENST00000544909 XAGE2Q96GT9 111 aa14.63□□□□□ -0.07
PAAF1-215ENST00000544909 MRVI1Q9Y6F6 885 aa14.63□□□□□ -0.07
PAAF1-215ENST00000544909 PDIA3P30101 505 aaKnown RBP14.62□□□□□ -0.07
PAAF1-215ENST00000544909 ADD1P35611 737 aaKnown RBP14.62□□□□□ -0.07
PAAF1-215ENST00000544909 TAF7LQ5H9L4 462 aa14.62□□□□□ -0.07
PAAF1-215ENST00000544909 BRAPQ7Z569 592 aa14.62□□□□□ -0.07
PAAF1-215ENST00000544909 BICD2Q8TD16 824 aa14.62□□□□□ -0.07
PAAF1-215ENST00000544909 OSBP2Q969R2 916 aa14.62□□□□□ -0.07
PAAF1-215ENST00000544909 RIPOR2Q9Y4F9 1068 aa14.62□□□□□ -0.07
PAAF1-215ENST00000544909 CARMIL3Q8ND23 1372 aa14.61□□□□□ -0.07
PAAF1-215ENST00000544909 ARAP2Q8WZ64 1704 aa14.61□□□□□ -0.07
PAAF1-215ENST00000544909 ITGB4P16144 1822 aa14.61□□□□□ -0.07
PAAF1-215ENST00000544909 A0A1W2PQ27 194 aa14.61□□□□□ -0.07
PAAF1-215ENST00000544909 A0A1W2PQ64 194 aa14.61□□□□□ -0.07
PAAF1-215ENST00000544909 A0A1W2PQD8 194 aa14.61□□□□□ -0.07
PAAF1-215ENST00000544909 CTDNEP1O95476 244 aa14.61□□□□□ -0.07
PAAF1-215ENST00000544909 CDC25BP30305 580 aa14.61□□□□□ -0.07
PAAF1-215ENST00000544909 UBE3CQ15386 1083 aa14.61□□□□□ -0.07
PAAF1-215ENST00000544909 NCOA7Q8NI08 942 aa14.61□□□□□ -0.07
PAAF1-215ENST00000544909 PGBD1Q96JS3 809 aa14.61□□□□□ -0.07
PAAF1-215ENST00000544909 NDUFB9Q9Y6M9 179 aa14.61□□□□□ -0.07
PAAF1-215ENST00000544909 COL22A1Q8NFW1 1626 aaPredicted RBP14.6□□□□□ -0.07
PAAF1-215ENST00000544909 UQCRFS1P1P0C7P4 283 aa14.6□□□□□ -0.07
PAAF1-215ENST00000544909 CTSWP56202 376 aa14.6□□□□□ -0.07
PAAF1-215ENST00000544909 ATP2B3Q16720 1220 aa14.6□□□□□ -0.07
PAAF1-215ENST00000544909 SARM1Q6SZW1 724 aa14.6□□□□□ -0.07
PAAF1-215ENST00000544909 NLRP10Q86W26 655 aa14.6□□□□□ -0.07
PAAF1-215ENST00000544909 MB21D2Q8IYB1 491 aaPredicted RBP14.6□□□□□ -0.07
PAAF1-215ENST00000544909 PIGBQ92521 554 aa14.6□□□□□ -0.07
PAAF1-215ENST00000544909 CDCA7Q9BWT1 371 aaPredicted RBP14.6□□□□□ -0.07
PAAF1-215ENST00000544909 ANKRD18BA2A2Z9 1011 aa14.59□□□□□ -0.07
PAAF1-215ENST00000544909 M0R2C6 588 aa14.59□□□□□ -0.07
PAAF1-215ENST00000544909 YEATS4O95619 227 aa14.59□□□□□ -0.07
PAAF1-215ENST00000544909 IL6STP40189 918 aaPredicted RBP14.59□□□□□ -0.07
PAAF1-215ENST00000544909 NOLC1Q14978 699 aaKnown RBP eCLIP14.59□□□□□ -0.07
PAAF1-215ENST00000544909 CCDC73Q6ZRK6 1079 aa14.59□□□□□ -0.07
PAAF1-215ENST00000544909 VGLL2Q8N8G2 317 aa14.59□□□□□ -0.07
PAAF1-215ENST00000544909 ZNF594Q96JF6 807 aaPredicted RBP14.59□□□□□ -0.07
PAAF1-215ENST00000544909 PUS3Q9BZE2 481 aaKnown RBP14.59□□□□□ -0.07
PAAF1-215ENST00000544909 RTEL1Q9NZ71 1219 aa14.59□□□□□ -0.07
PAAF1-215ENST00000544909 NWD2Q9ULI1 1742 aa14.59□□□□□ -0.07
PAAF1-215ENST00000544909 ARID4AP29374 1257 aaPredicted RBP14.59□□□□□ -0.07
PAAF1-215ENST00000544909 FAM160A1Q05DH4 1040 aa14.59□□□□□ -0.07
PAAF1-215ENST00000544909 APOBRQ0VD83 1088 aa14.59□□□□□ -0.07
PAAF1-215ENST00000544909 RALYLQ86SE5 291 aaKnown RBP14.59□□□□□ -0.07
PAAF1-215ENST00000544909 DNAJC10Q8IXB1 793 aa14.59□□□□□ -0.07
PAAF1-215ENST00000544909 TTLL11Q8NHH1 800 aa14.59□□□□□ -0.07
PAAF1-215ENST00000544909 KCNG4Q8TDN1 519 aa14.59□□□□□ -0.07
PAAF1-215ENST00000544909 MTA3Q9BTC8 594 aa14.59□□□□□ -0.07
PAAF1-215ENST00000544909 POLR3EQ9NVU0 708 aa14.59□□□□□ -0.07
PAAF1-215ENST00000544909 AKAP11Q9UKA4 1901 aa14.59□□□□□ -0.07
PAAF1-215ENST00000544909 WNK3Q9BYP7 1800 aa14.58□□□□□ -0.07
PAAF1-215ENST00000544909 RTL9Q8NET4 1388 aa14.58□□□□□ -0.08
PAAF1-215ENST00000544909 MROH5Q6ZUA9 1318 aa14.58□□□□□ -0.08
PAAF1-215ENST00000544909 PDE8AO60658 829 aa14.58□□□□□ -0.08
PAAF1-215ENST00000544909 NR1I2O75469 434 aa14.58□□□□□ -0.08
PAAF1-215ENST00000544909 CDKL5O76039 1030 aa14.58□□□□□ -0.08
PAAF1-215ENST00000544909 GTF2F1P35269 517 aaKnown RBP eCLIP14.58□□□□□ -0.08
PAAF1-215ENST00000544909 FKBP4Q02790 459 aaKnown RBP eCLIP14.58□□□□□ -0.08
PAAF1-215ENST00000544909 DHX8Q14562 1220 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms