RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 KIAA1468Q9P260 1216 aa14.65□□□□□ -0.06
SMG8-202ENST00000543872 PUF60Q9UHX1 559 aaKnown RBP14.65□□□□□ -0.06
SMG8-202ENST00000543872 EIF3CLB5ME19 914 aaKnown RBP14.65□□□□□ -0.06
SMG8-202ENST00000543872 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.65□□□□□ -0.06
SMG8-202ENST00000543872 MRPS27Q92552 414 aaKnown RBP14.65□□□□□ -0.06
SMG8-202ENST00000543872 ZNF396Q96N95 335 aaPredicted RBP14.65□□□□□ -0.06
SMG8-202ENST00000543872 EIF3CQ99613 913 aaKnown RBP14.65□□□□□ -0.06
SMG8-202ENST00000543872 CARD10Q9BWT7 1032 aa14.65□□□□□ -0.06
SMG8-202ENST00000543872 DEF6Q9H4E7 631 aa14.65□□□□□ -0.06
SMG8-202ENST00000543872 PCDHA7Q9UN72 937 aa14.65□□□□□ -0.06
SMG8-202ENST00000543872 PI4KAP2A4QPH2 592 aa14.64□□□□□ -0.07
SMG8-202ENST00000543872 SLC3A2P08195 630 aaKnown RBP14.64□□□□□ -0.07
SMG8-202ENST00000543872 CCDC172P0C7W6 258 aa14.64□□□□□ -0.07
SMG8-202ENST00000543872 PI4KAP1Q8N8J0 262 aa14.64□□□□□ -0.07
SMG8-202ENST00000543872 CCDC102AQ96A19 550 aa14.64□□□□□ -0.07
SMG8-202ENST00000543872 NEK1Q96PY6 1258 aa14.64□□□□□ -0.07
SMG8-202ENST00000543872 SUGCTQ9HAC7 445 aa14.64□□□□□ -0.07
SMG8-202ENST00000543872 FAN1Q9Y2M0 1017 aa14.64□□□□□ -0.07
SMG8-202ENST00000543872 MAP3K19Q56UN5 1328 aa14.64□□□□□ -0.07
SMG8-202ENST00000543872 ZSCAN12O43309 604 aa14.64□□□□□ -0.07
SMG8-202ENST00000543872 IVLP07476 585 aa14.64□□□□□ -0.07
SMG8-202ENST00000543872 SCRN1Q12765 414 aa14.64□□□□□ -0.07
SMG8-202ENST00000543872 NUTM2GQ5VZR2 741 aa14.64□□□□□ -0.07
SMG8-202ENST00000543872 TMED8Q6PL24 325 aaPredicted RBP14.64□□□□□ -0.07
SMG8-202ENST00000543872 TXNDC2Q86VQ3 553 aa14.64□□□□□ -0.07
SMG8-202ENST00000543872 NCOA5Q9HCD5 579 aaKnown RBP14.64□□□□□ -0.07
SMG8-202ENST00000543872 PPP2R2CQ9Y2T4 447 aa14.64□□□□□ -0.07
SMG8-202ENST00000543872 KIF20BQ96Q89 1820 aa14.64□□□□□ -0.07
SMG8-202ENST00000543872 MAP3K5Q99683 1374 aa14.64□□□□□ -0.07
SMG8-202ENST00000543872 POLR3DP05423 398 aaPredicted RBP14.64□□□□□ -0.07
SMG8-202ENST00000543872 STK38Q15208 465 aa14.64□□□□□ -0.07
SMG8-202ENST00000543872 OTUD7BQ6GQQ9 843 aa14.64□□□□□ -0.07
SMG8-202ENST00000543872 DHX58Q96C10 678 aa14.64□□□□□ -0.07
SMG8-202ENST00000543872 WASLO00401 505 aaPredicted RBP14.63□□□□□ -0.07
SMG8-202ENST00000543872 TOP1P11387 765 aaKnown RBP14.63□□□□□ -0.07
SMG8-202ENST00000543872 MAGEA9P43362 315 aa14.63□□□□□ -0.07
SMG8-202ENST00000543872 TSGA10IPQ3SY00 556 aa14.63□□□□□ -0.07
SMG8-202ENST00000543872 CCDC12Q8WUD4 166 aaPredicted RBP14.63□□□□□ -0.07
SMG8-202ENST00000543872 GOLGA1Q92805 767 aa14.63□□□□□ -0.07
SMG8-202ENST00000543872 BRMS1Q9HCU9 246 aa14.63□□□□□ -0.07
SMG8-202ENST00000543872 TUBGCP6Q96RT7 1819 aa14.63□□□□□ -0.07
SMG8-202ENST00000543872 VWA3AA6NCI4 1184 aa14.63□□□□□ -0.07
SMG8-202ENST00000543872 TMEM232C9JQI7 657 aa14.63□□□□□ -0.07
SMG8-202ENST00000543872 ERC1Q8IUD2 1116 aa14.63□□□□□ -0.07
SMG8-202ENST00000543872 EDC4Q6P2E9 1401 aaKnown RBP14.63□□□□□ -0.07
SMG8-202ENST00000543872 APOBRQ0VD83 1088 aa14.62□□□□□ -0.07
SMG8-202ENST00000543872 FMR1NBQ8N0W7 255 aaPredicted RBP14.62□□□□□ -0.07
SMG8-202ENST00000543872 MPHOSPH8Q99549 860 aa14.62□□□□□ -0.07
SMG8-202ENST00000543872 DESI2Q9BSY9 194 aa14.62□□□□□ -0.07
SMG8-202ENST00000543872 C9orf78Q9NZ63 289 aaPredicted RBP14.62□□□□□ -0.07
SMG8-202ENST00000543872 NEXMIFQ5QGS0 1516 aa14.62□□□□□ -0.07
SMG8-202ENST00000543872 TRHP20396 242 aaPredicted RBP14.62□□□□□ -0.07
SMG8-202ENST00000543872 IRX2Q9BZI1 471 aaPredicted RBP14.62□□□□□ -0.07
SMG8-202ENST00000543872 NDUFB9Q9Y6M9 179 aa14.62□□□□□ -0.07
SMG8-202ENST00000543872 PTPDC1A2A3K4 754 aa14.62□□□□□ -0.07
SMG8-202ENST00000543872 MAP3K9P80192 1104 aa14.62□□□□□ -0.07
SMG8-202ENST00000543872 JAKMIP3Q5VZ66 844 aa14.62□□□□□ -0.07
SMG8-202ENST00000543872 CCDC129Q6ZRS4 1044 aa14.62□□□□□ -0.07
SMG8-202ENST00000543872 RABGGTAQ92696 567 aa14.62□□□□□ -0.07
SMG8-202ENST00000543872 CCDC9Q9Y3X0 531 aaKnown RBP14.62□□□□□ -0.07
SMG8-202ENST00000543872 CCDC61Q9Y6R9 512 aa14.62□□□□□ -0.07
SMG8-202ENST00000543872 PLEKHG2Q9H7P9 1386 aa14.62□□□□□ -0.07
SMG8-202ENST00000543872 CHGBP05060 677 aa14.61□□□□□ -0.07
SMG8-202ENST00000543872 PSD3Q9NYI0 1048 aa14.61□□□□□ -0.07
SMG8-202ENST00000543872 TLR7Q9NYK1 1049 aaKnown RBP14.61□□□□□ -0.07
SMG8-202ENST00000543872 DNAJC21Q5F1R6 531 aaKnown RBP14.61□□□□□ -0.07
SMG8-202ENST00000543872 FBXO31Q5XUX0 539 aaPredicted RBP14.61□□□□□ -0.07
SMG8-202ENST00000543872 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.61□□□□□ -0.07
SMG8-202ENST00000543872 ABCA9Q8IUA7 1624 aa14.61□□□□□ -0.07
SMG8-202ENST00000543872 HIP1O00291 1037 aa14.61□□□□□ -0.07
SMG8-202ENST00000543872 RHOXF2BP0C7M4 288 aa14.61□□□□□ -0.07
SMG8-202ENST00000543872 KCNJ6P48051 423 aa14.61□□□□□ -0.07
SMG8-202ENST00000543872 NBPF6Q5VWK0 638 aa14.61□□□□□ -0.07
SMG8-202ENST00000543872 NBPF4Q96M43 638 aa14.61□□□□□ -0.07
SMG8-202ENST00000543872 RHOXF2Q9BQY4 288 aa14.61□□□□□ -0.07
SMG8-202ENST00000543872 TXLNAP40222 546 aa14.6□□□□□ -0.07
SMG8-202ENST00000543872 PSME1Q06323 249 aa14.6□□□□□ -0.07
SMG8-202ENST00000543872 MTX1Q13505 466 aa14.6□□□□□ -0.07
SMG8-202ENST00000543872 NCAPHQ15003 741 aa14.6□□□□□ -0.07
SMG8-202ENST00000543872 HSP90B2PQ58FF3 399 aa14.6□□□□□ -0.07
SMG8-202ENST00000543872 EAF2Q96CJ1 260 aaPredicted RBP14.6□□□□□ -0.07
SMG8-202ENST00000543872 MRFAP1Q9Y605 127 aa14.6□□□□□ -0.07
SMG8-202ENST00000543872 ADKP55263 362 aaKnown RBP14.6□□□□□ -0.07
SMG8-202ENST00000543872 RSRC2Q7L4I2 434 aaKnown RBP14.6□□□□□ -0.07
SMG8-202ENST00000543872 DNAAF4Q8WXU2 420 aa14.6□□□□□ -0.07
SMG8-202ENST00000543872 NLRP12P59046 1061 aa14.6□□□□□ -0.07
SMG8-202ENST00000543872 TOGARAM2Q6ZUX3 1019 aa14.6□□□□□ -0.07
SMG8-202ENST00000543872 CHST3Q7LGC8 479 aa14.6□□□□□ -0.07
SMG8-202ENST00000543872 LMTK2Q8IWU2 1503 aa14.6□□□□□ -0.07
SMG8-202ENST00000543872 CCDC151A5D8V7 595 aa14.59□□□□□ -0.07
SMG8-202ENST00000543872 TEFQ10587 303 aa14.59□□□□□ -0.07
SMG8-202ENST00000543872 G3BP1Q13283 466 aaKnown RBP eCLIP14.59□□□□□ -0.072e-6■□□□□ 11.3
SMG8-202ENST00000543872 MICALL1Q8N3F8 863 aa14.59□□□□□ -0.07
SMG8-202ENST00000543872 NSUN7Q8NE18 718 aaKnown RBP14.59□□□□□ -0.07
SMG8-202ENST00000543872 LZTFL1Q9NQ48 299 aa14.59□□□□□ -0.07
SMG8-202ENST00000543872 CLIC4Q9Y696 253 aa14.59□□□□□ -0.07
SMG8-202ENST00000543872 ADGRL3Q9HAR2 1447 aa14.59□□□□□ -0.07
SMG8-202ENST00000543872 CHMP4BP1P59074 171 aa14.59□□□□□ -0.07
SMG8-202ENST00000543872 HDXQ7Z353 690 aa14.59□□□□□ -0.07
SMG8-202ENST00000543872 PPM1EQ8WY54 764 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms