RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 KCNB2Q92953 911 aa16.72■□□□□ 0.27
PRAME-214ENST00000543184 EPHA10Q5JZY3 1008 aa16.72■□□□□ 0.27
PRAME-214ENST00000543184 Q6ZUG5 572 aa16.72■□□□□ 0.27
PRAME-214ENST00000543184 CHST3Q7LGC8 479 aa16.72■□□□□ 0.27
PRAME-214ENST00000543184 DNAJC2Q99543 621 aaKnown RBP16.72■□□□□ 0.27
PRAME-214ENST00000543184 COL15A1P39059 1388 aa16.72■□□□□ 0.27
PRAME-214ENST00000543184 TPM3P06753 285 aa16.72■□□□□ 0.27
PRAME-214ENST00000543184 PSMA5P28066 241 aa16.72■□□□□ 0.27
PRAME-214ENST00000543184 CCT2P78371 535 aaKnown RBP16.72■□□□□ 0.27
PRAME-214ENST00000543184 CCDC112Q8NEF3 446 aa16.72■□□□□ 0.27
PRAME-214ENST00000543184 SCAND2PQ9GZW5 306 aaPredicted RBP16.72■□□□□ 0.27
PRAME-214ENST00000543184 PXDNLA1KZ92 1463 aa16.71■□□□□ 0.27
PRAME-214ENST00000543184 CACNA1FO60840 1977 aa16.71■□□□□ 0.27
PRAME-214ENST00000543184 GOLPH3LQ9H4A5 285 aa16.71■□□□□ 0.27
PRAME-214ENST00000543184 TRIM37O94972 964 aa16.71■□□□□ 0.26
PRAME-214ENST00000543184 ZNF771Q7L3S4 317 aaPredicted RBP16.71■□□□□ 0.26
PRAME-214ENST00000543184 ATRNO75882 1429 aa16.7■□□□□ 0.26
PRAME-214ENST00000543184 TNS2Q63HR2 1409 aa16.7■□□□□ 0.26
PRAME-214ENST00000543184 RBM6P78332 1123 aaKnown RBP16.7■□□□□ 0.26
PRAME-214ENST00000543184 FGD1P98174 961 aa16.7■□□□□ 0.26
PRAME-214ENST00000543184 NCOA5Q9HCD5 579 aaKnown RBP16.7■□□□□ 0.26
PRAME-214ENST00000543184 CTNNA3Q9UI47 895 aa16.7■□□□□ 0.26
PRAME-214ENST00000543184 LRRC37A3O60309 1634 aa16.7■□□□□ 0.26
PRAME-214ENST00000543184 PDCP20941 246 aa16.7■□□□□ 0.26
PRAME-214ENST00000543184 TDRD7Q8NHU6 1098 aaKnown RBP16.7■□□□□ 0.26
PRAME-214ENST00000543184 ST7Q9NRC1 585 aa16.7■□□□□ 0.26
PRAME-214ENST00000543184 DDX19AQ9NUU7 478 aaKnown RBP16.7■□□□□ 0.26
PRAME-214ENST00000543184 DBF4Q9UBU7 674 aaPredicted RBP16.7■□□□□ 0.26
PRAME-214ENST00000543184 ELP1O95163 1332 aa16.69■□□□□ 0.26
PRAME-214ENST00000543184 SMTNL1A8MU46 457 aa16.69■□□□□ 0.26
PRAME-214ENST00000543184 GRM8O00222 908 aa16.69■□□□□ 0.26
PRAME-214ENST00000543184 TAF5LO75529 589 aa16.69■□□□□ 0.26
PRAME-214ENST00000543184 RESTQ13127 1097 aa16.69■□□□□ 0.26
PRAME-214ENST00000543184 CEP135Q66GS9 1140 aa16.69■□□□□ 0.26
PRAME-214ENST00000543184 ZNF215Q9UL58 517 aaPredicted RBP16.69■□□□□ 0.26
PRAME-214ENST00000543184 GOLGA6L19H0YKK7 550 aa16.69■□□□□ 0.26
PRAME-214ENST00000543184 KSR2Q6VAB6 950 aa16.69■□□□□ 0.26
PRAME-214ENST00000543184 DDX46Q7L014 1031 aaKnown RBP16.69■□□□□ 0.26
PRAME-214ENST00000543184 KRT27Q7Z3Y8 459 aa16.69■□□□□ 0.26
PRAME-214ENST00000543184 LRRC8AQ8IWT6 810 aa16.69■□□□□ 0.26
PRAME-214ENST00000543184 SCRN1Q12765 414 aa16.68■□□□□ 0.26
PRAME-214ENST00000543184 CCAR1Q8IX12 1150 aaKnown RBP16.68■□□□□ 0.26
PRAME-214ENST00000543184 SKILP12757 684 aa16.68■□□□□ 0.26
PRAME-214ENST00000543184 RNF20Q5VTR2 975 aa16.68■□□□□ 0.26
PRAME-214ENST00000543184 CDCA7Q9BWT1 371 aaPredicted RBP16.68■□□□□ 0.26
PRAME-214ENST00000543184 GTPBP4Q9BZE4 634 aaKnown RBP16.68■□□□□ 0.26
PRAME-214ENST00000543184 ATG3Q9NT62 314 aa16.68■□□□□ 0.26
PRAME-214ENST00000543184 NWD2Q9ULI1 1742 aa16.68■□□□□ 0.26
PRAME-214ENST00000543184 GIGYF1O75420 1035 aaPredicted RBP16.67■□□□□ 0.26
PRAME-214ENST00000543184 MTX1Q13505 466 aa16.67■□□□□ 0.26
PRAME-214ENST00000543184 IQCB1Q15051 598 aa16.67■□□□□ 0.26
PRAME-214ENST00000543184 PTPN21Q16825 1174 aa16.67■□□□□ 0.26
PRAME-214ENST00000543184 OTUD7BQ6GQQ9 843 aa16.67■□□□□ 0.26
PRAME-214ENST00000543184 NEK1Q96PY6 1258 aa16.67■□□□□ 0.26
PRAME-214ENST00000543184 CYP21A2P08686 494 aa16.67■□□□□ 0.26
PRAME-214ENST00000543184 APOBRQ0VD83 1088 aa16.67■□□□□ 0.26
PRAME-214ENST00000543184 NKX1-1Q15270 411 aaPredicted RBP16.67■□□□□ 0.26
PRAME-214ENST00000543184 ISM2Q6H9L7 571 aa16.67■□□□□ 0.26
PRAME-214ENST00000543184 RAB11FIP4Q86YS3 637 aa16.67■□□□□ 0.26
PRAME-214ENST00000543184 GTF3C6Q969F1 213 aa16.67■□□□□ 0.26
PRAME-214ENST00000543184 FMNL2Q96PY5 1086 aa16.67■□□□□ 0.26
PRAME-214ENST00000543184 ZBTB22O15209 634 aa16.66■□□□□ 0.26
PRAME-214ENST00000543184 IGKV5-2P06315 115 aa16.66■□□□□ 0.26
PRAME-214ENST00000543184 STOX1Q6ZVD7 989 aa16.66■□□□□ 0.26
PRAME-214ENST00000543184 LRRN4CLQ8ND94 238 aa16.66■□□□□ 0.26
PRAME-214ENST00000543184 USP28Q96RU2 1077 aa16.66■□□□□ 0.26
PRAME-214ENST00000543184 CCDC69A6NI79 296 aa16.66■□□□□ 0.26
PRAME-214ENST00000543184 BECN2A8MW95 431 aa16.66■□□□□ 0.26
PRAME-214ENST00000543184 RIC3Q7Z5B4 369 aa16.66■□□□□ 0.26
PRAME-214ENST00000543184 ERC1Q8IUD2 1116 aa16.66■□□□□ 0.26
PRAME-214ENST00000543184 SLC4A9Q96Q91 983 aa16.66■□□□□ 0.26
PRAME-214ENST00000543184 ELF2Q15723 593 aa16.66■□□□□ 0.26
PRAME-214ENST00000543184 KMT5BQ4FZB7 885 aa16.66■□□□□ 0.26
PRAME-214ENST00000543184 RBM43Q6ZSC3 357 aaKnown RBP16.66■□□□□ 0.26
PRAME-214ENST00000543184 DBNLQ9UJU6 430 aaKnown RBP16.66■□□□□ 0.26
PRAME-214ENST00000543184 ERVV-2B6SEH9 535 aa16.65■□□□□ 0.26
PRAME-214ENST00000543184 A1BGP04217 495 aa16.65■□□□□ 0.26
PRAME-214ENST00000543184 TFCP2Q12800 502 aa16.65■□□□□ 0.26
PRAME-214ENST00000543184 AOPEPQ8N6M6 819 aa16.65■□□□□ 0.26
PRAME-214ENST00000543184 PARP4Q9UKK3 1724 aaKnown RBP16.65■□□□□ 0.26
PRAME-214ENST00000543184 BIN1O00499 593 aa16.65■□□□□ 0.26
PRAME-214ENST00000543184 ANKRD1Q15327 319 aa16.65■□□□□ 0.26
PRAME-214ENST00000543184 DNAJC10Q8IXB1 793 aa16.65■□□□□ 0.26
PRAME-214ENST00000543184 MYD88Q99836 296 aa16.65■□□□□ 0.26
PRAME-214ENST00000543184 GPHNQ9NQX3 736 aaPredicted RBP16.65■□□□□ 0.26
PRAME-214ENST00000543184 CGNQ9P2M7 1197 aaKnown RBP16.65■□□□□ 0.26
PRAME-214ENST00000543184 ADD1P35611 737 aaKnown RBP16.64■□□□□ 0.25
PRAME-214ENST00000543184 GJB4Q9NTQ9 266 aa16.64■□□□□ 0.25
PRAME-214ENST00000543184 OGFRQ9NZT2 677 aa16.64■□□□□ 0.25
PRAME-214ENST00000543184 MED23Q9ULK4 1368 aa16.64■□□□□ 0.25
PRAME-214ENST00000543184 SHANK3Q9BYB0 1731 aa16.64■□□□□ 0.25
PRAME-214ENST00000543184 PTPN14Q15678 1187 aa16.64■□□□□ 0.25
PRAME-214ENST00000543184 DBNDD2Q9BQY9 259 aa16.64■□□□□ 0.25
PRAME-214ENST00000543184 A0A1B0GVL5 298 aa16.63■□□□□ 0.25
PRAME-214ENST00000543184 CTDNEP1O95476 244 aa16.63■□□□□ 0.25
PRAME-214ENST00000543184 ME1P48163 572 aa16.63■□□□□ 0.25
PRAME-214ENST00000543184 DHX40Q8IX18 779 aaKnown RBP16.63■□□□□ 0.25
PRAME-214ENST00000543184 ATP5J2-PTCD1G3V325 749 aa16.63■□□□□ 0.25
PRAME-214ENST00000543184 KIF18AQ8NI77 898 aa16.63■□□□□ 0.25
PRAME-214ENST00000543184 BABAM1Q9NWV8 329 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms