RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 GOLGA6L9A6NEM1 432 aa11.27□□□□□ -0.6
TCF4-208ENST00000543082 ACTN2P35609 894 aa11.27□□□□□ -0.6
TCF4-208ENST00000543082 LMAN1P49257 510 aa11.27□□□□□ -0.6
TCF4-208ENST00000543082 RABGGTAQ92696 567 aa11.27□□□□□ -0.6
TCF4-208ENST00000543082 CCDC34Q96HJ3 373 aa11.27□□□□□ -0.6
TCF4-208ENST00000543082 USP28Q96RU2 1077 aa11.27□□□□□ -0.6
TCF4-208ENST00000543082 SDF4Q9BRK5 362 aa11.27□□□□□ -0.6
TCF4-208ENST00000543082 HDAC5Q9UQL6 1122 aa11.27□□□□□ -0.6
TCF4-208ENST00000543082 A0A1W2PQ27 194 aa11.27□□□□□ -0.61
TCF4-208ENST00000543082 A0A1W2PQ64 194 aa11.27□□□□□ -0.61
TCF4-208ENST00000543082 A0A1W2PQD8 194 aa11.27□□□□□ -0.61
TCF4-208ENST00000543082 PLEKHG3A1L390 1219 aa11.27□□□□□ -0.61
TCF4-208ENST00000543082 TRIM66O15016 1216 aa11.27□□□□□ -0.61
TCF4-208ENST00000543082 CBFA2T2O43439 604 aa11.27□□□□□ -0.61
TCF4-208ENST00000543082 TAF7Q15545 349 aaPredicted RBP11.27□□□□□ -0.61
TCF4-208ENST00000543082 DPCR1Q3MIW9 517 aa11.27□□□□□ -0.61
TCF4-208ENST00000543082 USPL1Q5W0Q7 1092 aa11.27□□□□□ -0.61
TCF4-208ENST00000543082 LEKR1Q6ZMV7 388 aa11.27□□□□□ -0.61
TCF4-208ENST00000543082 NEK1Q96PY6 1258 aa11.27□□□□□ -0.61
TCF4-208ENST00000543082 FUT8Q9BYC5 575 aa11.27□□□□□ -0.61
TCF4-208ENST00000543082 ZCCHC17Q9NP64 241 aaKnown RBP11.27□□□□□ -0.61
TCF4-208ENST00000543082 GEMIN8Q9NWZ8 242 aaKnown RBP11.27□□□□□ -0.61
TCF4-208ENST00000543082 KIAA1468Q9P260 1216 aa11.27□□□□□ -0.61
TCF4-208ENST00000543082 LCMT1Q9UIC8 334 aa11.27□□□□□ -0.61
TCF4-208ENST00000543082 TAF6LQ9Y6J9 622 aa11.27□□□□□ -0.61
TCF4-208ENST00000543082 PLEKHG2Q9H7P9 1386 aa11.27□□□□□ -0.61
TCF4-208ENST00000543082 KDM3BQ7LBC6 1761 aa11.26□□□□□ -0.61
TCF4-208ENST00000543082 A0A1B0GUL7 405 aa11.26□□□□□ -0.61
TCF4-208ENST00000543082 NLRP12P59046 1061 aa11.26□□□□□ -0.61
TCF4-208ENST00000543082 ICE2Q659A1 982 aa11.26□□□□□ -0.61
TCF4-208ENST00000543082 Q6ZUG5 572 aa11.26□□□□□ -0.61
TCF4-208ENST00000543082 RSRC2Q7L4I2 434 aaKnown RBP11.26□□□□□ -0.61
TCF4-208ENST00000543082 TXNDC2Q86VQ3 553 aa11.26□□□□□ -0.61
TCF4-208ENST00000543082 FBXW7Q969H0 707 aa11.26□□□□□ -0.61
TCF4-208ENST00000543082 FTOQ9C0B1 505 aaKnown RBP eCLIP11.26□□□□□ -0.61
TCF4-208ENST00000543082 BRMS1Q9HCU9 246 aa11.26□□□□□ -0.61
TCF4-208ENST00000543082 ADAM21Q9UKJ8 722 aa11.26□□□□□ -0.61
TCF4-208ENST00000543082 IKBKBO14920 756 aa11.26□□□□□ -0.61
TCF4-208ENST00000543082 PFKFB2O60825 505 aa11.26□□□□□ -0.61
TCF4-208ENST00000543082 ALDH1L1O75891 902 aa11.26□□□□□ -0.61
TCF4-208ENST00000543082 GTF2A1P52655 376 aaPredicted RBP11.26□□□□□ -0.61
TCF4-208ENST00000543082 FANCCQ00597 558 aa11.26□□□□□ -0.61
TCF4-208ENST00000543082 PPP2R3AQ06190 1150 aa11.26□□□□□ -0.61
TCF4-208ENST00000543082 GNL2Q13823 731 aaKnown RBP11.26□□□□□ -0.61
TCF4-208ENST00000543082 GOLGA1Q92805 767 aa11.26□□□□□ -0.61
TCF4-208ENST00000543082 TMX1Q9H3N1 280 aa11.26□□□□□ -0.61
TCF4-208ENST00000543082 NCAPD2Q15021 1401 aa11.25□□□□□ -0.61
TCF4-208ENST00000543082 CCDC151A5D8V7 595 aa11.25□□□□□ -0.61
TCF4-208ENST00000543082 MAP3K9P80192 1104 aa11.25□□□□□ -0.61
TCF4-208ENST00000543082 BRD3Q15059 726 aa11.25□□□□□ -0.61
TCF4-208ENST00000543082 ADALQ6DHV7 355 aa11.25□□□□□ -0.61
TCF4-208ENST00000543082 NSUN7Q8NE18 718 aaKnown RBP11.25□□□□□ -0.61
TCF4-208ENST00000543082 MRFAP1Q9Y605 127 aa11.25□□□□□ -0.61
TCF4-208ENST00000543082 AGLP35573 1532 aa11.25□□□□□ -0.61
TCF4-208ENST00000543082 FANCGO15287 622 aa11.25□□□□□ -0.61
TCF4-208ENST00000543082 TAF5LO75529 589 aa11.25□□□□□ -0.61
TCF4-208ENST00000543082 RPS6KA5O75582 802 aa11.25□□□□□ -0.61
TCF4-208ENST00000543082 SCRN1Q12765 414 aa11.25□□□□□ -0.61
TCF4-208ENST00000543082 ACEP12821 1306 aa11.25□□□□□ -0.61
TCF4-208ENST00000543082 TSPOAP1O95153 1857 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 PTPDC1A2A3K4 754 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 ARHGAP6O43182 974 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 HOXB7P09629 217 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 NCAPHQ15003 741 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 LONRF2Q1L5Z9 754 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 CERS3Q8IU89 383 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 MSL3Q8N5Y2 521 aaKnown RBP11.24□□□□□ -0.61
TCF4-208ENST00000543082 RGS22Q8NE09 1264 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 ERCC4Q92889 916 aaPredicted RBP11.24□□□□□ -0.61
TCF4-208ENST00000543082 EYA1Q99502 592 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 PARD6BQ9BYG5 372 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 PCDHA7Q9UN72 937 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.24□□□□□ -0.61
TCF4-208ENST00000543082 RFX7Q2KHR2 1363 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 PI4KAP2A4QPH2 592 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 VWA3AA6NCI4 1184 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 MAP2K7O14733 419 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 MYO1BO43795 1136 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 SLC3A2P08195 630 aaKnown RBP11.24□□□□□ -0.61
TCF4-208ENST00000543082 MAGEA9P43362 315 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 TTC31Q49AM3 519 aaPredicted RBP11.24□□□□□ -0.61
TCF4-208ENST00000543082 ZNF589Q86UQ0 364 aaPredicted RBP11.24□□□□□ -0.61
TCF4-208ENST00000543082 PI4KAP1Q8N8J0 262 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 CHMP4CQ96CF2 233 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 SLC26A8Q96RN1 970 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 RTEL1Q9NZ71 1219 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 PPP2R2CQ9Y2T4 447 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 PTPRUQ92729 1446 aa11.24□□□□□ -0.61
TCF4-208ENST00000543082 H3BQF6 201 aa11.23□□□□□ -0.61
TCF4-208ENST00000543082 POTEB2H3BUK9 544 aa11.23□□□□□ -0.61
TCF4-208ENST00000543082 EIF3JO75822 258 aaKnown RBP11.23□□□□□ -0.61
TCF4-208ENST00000543082 HMGB1P09429 215 aaKnown RBP11.23□□□□□ -0.61
TCF4-208ENST00000543082 TXLNAP40222 546 aa11.23□□□□□ -0.61
TCF4-208ENST00000543082 NDUFA8P51970 172 aa11.23□□□□□ -0.61
TCF4-208ENST00000543082 UTP14AQ9BVJ6 771 aaKnown RBP11.23□□□□□ -0.61
TCF4-208ENST00000543082 ZNF219Q9P2Y4 722 aaPredicted RBP11.23□□□□□ -0.61
TCF4-208ENST00000543082 MRC1P22897 1456 aa11.23□□□□□ -0.61
TCF4-208ENST00000543082 A0A1B0GVL5 298 aa11.23□□□□□ -0.61
TCF4-208ENST00000543082 LMOD1P29536 600 aaPredicted RBP11.23□□□□□ -0.61
TCF4-208ENST00000543082 NEDD4P46934 1319 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms