RNA–Protein interactions for RNA: ENST00000543049.1

NLRC5-222, Transcript of NLR family CARD domain containing 5, human

TSL 2

Gene NLRC5, Length 484 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NLRC5-222	ENST00000543049	USP17L1	Q7RTZ2	530 aa		13.72	□□□□□ -0.21
NLRC5-222	ENST00000543049	NKX2-3	Q8TAU0	364 aa		13.72	□□□□□ -0.21
NLRC5-222	ENST00000543049	EVI5	O60447	810 aa		13.71	□□□□□ -0.21
NLRC5-222	ENST00000543049	GJA5	P36382	358 aa		13.71	□□□□□ -0.21
NLRC5-222	ENST00000543049	OGFOD1	Q8N543	542 aa		13.71	□□□□□ -0.21
NLRC5-222	ENST00000543049	MXD3	Q9BW11	206 aa		13.71	□□□□□ -0.21
NLRC5-222	ENST00000543049	TESPA1	A2RU30	521 aa	Predicted RBP	13.7	□□□□□ -0.22
NLRC5-222	ENST00000543049	GJA8	P48165	433 aa		13.7	□□□□□ -0.22
NLRC5-222	ENST00000543049	MAP3K11	Q16584	847 aa		13.7	□□□□□ -0.22
NLRC5-222	ENST00000543049	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.7	□□□□□ -0.22
NLRC5-222	ENST00000543049	ARHGAP39	Q9C0H5	1083 aa		13.7	□□□□□ -0.22
NLRC5-222	ENST00000543049	ZFYVE28	Q9HCC9	887 aa		13.7	□□□□□ -0.22
NLRC5-222	ENST00000543049	ANKIB1	Q9P2G1	1089 aa		13.7	□□□□□ -0.22
NLRC5-222	ENST00000543049	PPP1R12B	O60237	982 aa	Predicted RBP	13.69	□□□□□ -0.22
NLRC5-222	ENST00000543049	EIF4A1	P60842	406 aa	Known RBP	13.69	□□□□□ -0.22
NLRC5-222	ENST00000543049	RPS8	P62241	208 aa	Known RBP	13.69	□□□□□ -0.22
NLRC5-222	ENST00000543049	SF3B3	Q15393	1217 aa	Known RBP	13.69	□□□□□ -0.22
NLRC5-222	ENST00000543049	TAF1C	Q15572	869 aa	Predicted RBP	13.69	□□□□□ -0.22
NLRC5-222	ENST00000543049	RSPH6A	Q9H0K4	717 aa		13.69	□□□□□ -0.22
NLRC5-222	ENST00000543049	PODXL2	Q9NZ53	605 aa		13.69	□□□□□ -0.22
NLRC5-222	ENST00000543049	GGA1	Q9UJY5	639 aa		13.69	□□□□□ -0.22
NLRC5-222	ENST00000543049	COL4A1	P02462	1669 aa		13.69	□□□□□ -0.22
NLRC5-222	ENST00000543049	ECM2	O94769	699 aa	Predicted RBP	13.68	□□□□□ -0.22
NLRC5-222	ENST00000543049	FARP2	O94887	1054 aa	Predicted RBP	13.68	□□□□□ -0.22
NLRC5-222	ENST00000543049	GJB1	P08034	283 aa		13.68	□□□□□ -0.22
NLRC5-222	ENST00000543049	KIF22	Q14807	665 aa		13.68	□□□□□ -0.22
NLRC5-222	ENST00000543049	HSP90AB3P	Q58FF7	597 aa		13.68	□□□□□ -0.22
NLRC5-222	ENST00000543049	RAPGEFL1	Q9UHV5	662 aa		13.68	□□□□□ -0.22
NLRC5-222	ENST00000543049	HTATSF1	O43719	755 aa	Known RBP	13.67	□□□□□ -0.22
NLRC5-222	ENST00000543049	ANXA1	P04083	346 aa		13.67	□□□□□ -0.22
NLRC5-222	ENST00000543049	CCL5	P13501	91 aa		13.67	□□□□□ -0.22
NLRC5-222	ENST00000543049	BMP8B	P34820	402 aa		13.67	□□□□□ -0.22
NLRC5-222	ENST00000543049	LRP10	Q7Z4F1	713 aa		13.67	□□□□□ -0.22
NLRC5-222	ENST00000543049	PODN	Q7Z5L7	613 aa		13.67	□□□□□ -0.22
NLRC5-222	ENST00000543049	FBXW7	Q969H0	707 aa		13.67	□□□□□ -0.22
NLRC5-222	ENST00000543049	DEFB129	Q9H1M3	183 aa		13.67	□□□□□ -0.22
NLRC5-222	ENST00000543049	COL3A1	P02461	1466 aa	Predicted RBP	13.67	□□□□□ -0.22
NLRC5-222	ENST00000543049	BCAM	P50895	628 aa		13.66	□□□□□ -0.22
NLRC5-222	ENST00000543049	AIMP1	Q12904	312 aa	Known RBP	13.66	□□□□□ -0.22
NLRC5-222	ENST00000543049	PDIA6	Q15084	440 aa		13.66	□□□□□ -0.22
NLRC5-222	ENST00000543049	CC2D1B	Q5T0F9	858 aa	Known RBP	13.66	□□□□□ -0.22
NLRC5-222	ENST00000543049	FAM89A	Q96GI7	184 aa		13.66	□□□□□ -0.22
NLRC5-222	ENST00000543049	GDF15	Q99988	308 aa		13.66	□□□□□ -0.22
NLRC5-222	ENST00000543049	RNF208	Q9H0X6	261 aa		13.66	□□□□□ -0.22
NLRC5-222	ENST00000543049	ZNF646	O15015	1829 aa	Predicted RBP	13.65	□□□□□ -0.22
NLRC5-222	ENST00000543049	PSME4	Q14997	1843 aa		13.65	□□□□□ -0.22
NLRC5-222	ENST00000543049	UNCX	A6NJT0	531 aa		13.65	□□□□□ -0.22
NLRC5-222	ENST00000543049	EIF2S2	P20042	333 aa	Known RBP	13.65	□□□□□ -0.22
NLRC5-222	ENST00000543049	PRMT2	P55345	433 aa		13.65	□□□□□ -0.22
NLRC5-222	ENST00000543049	LACTB	P83111	547 aa	Predicted RBP	13.65	□□□□□ -0.22
NLRC5-222	ENST00000543049	PROSER3	Q2NL68	480 aa		13.65	□□□□□ -0.22
NLRC5-222	ENST00000543049	LRIT3	Q3SXY7	679 aa		13.65	□□□□□ -0.22
NLRC5-222	ENST00000543049	DACT2	Q5SW24	774 aa		13.65	□□□□□ -0.22
NLRC5-222	ENST00000543049	PNISR	Q8TF01	805 aa	Known RBP	13.65	□□□□□ -0.22
NLRC5-222	ENST00000543049	BRI3BP	Q8WY22	251 aa		13.65	□□□□□ -0.22
NLRC5-222	ENST00000543049	MS4A4A	Q96JQ5	239 aa		13.65	□□□□□ -0.22
NLRC5-222	ENST00000543049	LAMB1	P07942	1786 aa		13.65	□□□□□ -0.22
NLRC5-222	ENST00000543049	RPTOR	Q8N122	1335 aa		13.64	□□□□□ -0.23
NLRC5-222	ENST00000543049	VCAN	P13611	3396 aa		13.64	□□□□□ -0.23
NLRC5-222	ENST00000543049	USP2	O75604	605 aa	Predicted RBP	13.64	□□□□□ -0.23
NLRC5-222	ENST00000543049	GNRH1	P01148	92 aa		13.64	□□□□□ -0.23
NLRC5-222	ENST00000543049	IREB2	P48200	963 aa	Known RBP	13.64	□□□□□ -0.23
NLRC5-222	ENST00000543049	COPS6	Q7L5N1	327 aa		13.64	□□□□□ -0.23
NLRC5-222	ENST00000543049	FAM43A	Q8N2R8	423 aa		13.64	□□□□□ -0.23
NLRC5-222	ENST00000543049	U2AF1L4	Q8WU68	220 aa	Known RBP	13.64	□□□□□ -0.23
NLRC5-222	ENST00000543049	OPTN	Q96CV9	577 aa		13.64	□□□□□ -0.23
NLRC5-222	ENST00000543049	ELP3	Q9H9T3	547 aa		13.64	□□□□□ -0.23
NLRC5-222	ENST00000543049	BIN2	Q9UBW5	565 aa	Predicted RBP	13.64	□□□□□ -0.23
NLRC5-222	ENST00000543049	ZSWIM8	A7E2V4	1837 aa		13.64	□□□□□ -0.23
NLRC5-222	ENST00000543049	SSC5D	A1L4H1	1573 aa		13.63	□□□□□ -0.23
NLRC5-222	ENST00000543049	CCL15-CCL14	A0A0B4J2E2	113 aa		13.63	□□□□□ -0.23
NLRC5-222	ENST00000543049	GRK4	P32298	578 aa		13.63	□□□□□ -0.23
NLRC5-222	ENST00000543049	CNGB1	Q14028	1251 aa	Predicted RBP	13.63	□□□□□ -0.23
NLRC5-222	ENST00000543049	CCL15	Q16663	113 aa		13.63	□□□□□ -0.23
NLRC5-222	ENST00000543049	RTL5	Q5HYW3	569 aa	Predicted RBP	13.63	□□□□□ -0.23
NLRC5-222	ENST00000543049	ANKRD13A	Q8IZ07	590 aa		13.63	□□□□□ -0.23
NLRC5-222	ENST00000543049	SEC31B	Q9NQW1	1179 aa		13.63	□□□□□ -0.23
NLRC5-222	ENST00000543049	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.62	□□□□□ -0.23
NLRC5-222	ENST00000543049	SUPT20HL1	Q3ZLR7	823 aa		13.62	□□□□□ -0.23
NLRC5-222	ENST00000543049	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.62	□□□□□ -0.23
NLRC5-222	ENST00000543049	KIAA0825	Q8IV33	1275 aa		13.62	□□□□□ -0.23
NLRC5-222	ENST00000543049	RAET1E	Q8TD07	263 aa		13.62	□□□□□ -0.23
NLRC5-222	ENST00000543049	XAGE3	Q8WTP9	111 aa		13.62	□□□□□ -0.23
NLRC5-222	ENST00000543049	ZBED3	Q96IU2	234 aa	Predicted RBP	13.62	□□□□□ -0.23
NLRC5-222	ENST00000543049	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.62	□□□□□ -0.23
NLRC5-222	ENST00000543049	RIPOR2	Q9Y4F9	1068 aa		13.62	□□□□□ -0.23
NLRC5-222	ENST00000543049	MYO3B	Q8WXR4	1341 aa		13.62	□□□□□ -0.23
NLRC5-222	ENST00000543049	TLR2	O60603	784 aa		13.61	□□□□□ -0.23
NLRC5-222	ENST00000543049	WDHD1	O75717	1129 aa	Predicted RBP	13.61	□□□□□ -0.23
NLRC5-222	ENST00000543049	SGPL1	O95470	568 aa		13.61	□□□□□ -0.23
NLRC5-222	ENST00000543049	PLA2G5	P39877	138 aa		13.61	□□□□□ -0.23
NLRC5-222	ENST00000543049	TDH	Q8IZJ6	230 aa		13.61	□□□□□ -0.23
NLRC5-222	ENST00000543049	CNKSR2	Q8WXI2	1034 aa		13.61	□□□□□ -0.23
NLRC5-222	ENST00000543049	TRIM47	Q96LD4	638 aa		13.61	□□□□□ -0.23
NLRC5-222	ENST00000543049	GUCD1	Q96NT3	240 aa		13.61	□□□□□ -0.23
NLRC5-222	ENST00000543049	SRRD	Q9UH36	339 aa		13.61	□□□□□ -0.23
NLRC5-222	ENST00000543049	COL1A1	P02452	1464 aa	Predicted RBP	13.61	□□□□□ -0.23
NLRC5-222	ENST00000543049	TFRC	P02786	760 aa	Known RBP	13.6	□□□□□ -0.23
NLRC5-222	ENST00000543049	HSPA5	P11021	654 aa	Known RBP	13.6	□□□□□ -0.23
NLRC5-222	ENST00000543049	ATP2B4	P23634	1241 aa		13.6	□□□□□ -0.23

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