RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 FCHSD1Q86WN1 690 aa5.65□□□□□ -1.5
SFSWAP-211ENST00000542813 TREML1Q86YW5 311 aa5.65□□□□□ -1.5
SFSWAP-211ENST00000542813 ZDHHC1Q8WTX9 485 aa5.65□□□□□ -1.5
SFSWAP-211ENST00000542813 ZIC5Q96T25 663 aa5.65□□□□□ -1.5
SFSWAP-211ENST00000542813 CABP1Q9NZU7 370 aa5.65□□□□□ -1.5
SFSWAP-211ENST00000542813 KLF15Q9UIH9 416 aa5.65□□□□□ -1.5
SFSWAP-211ENST00000542813 HCN2Q9UL51 889 aa5.65□□□□□ -1.5
SFSWAP-211ENST00000542813 GJA3Q9Y6H8 435 aa5.65□□□□□ -1.5
SFSWAP-211ENST00000542813 A6NHS1 94 aa5.64□□□□□ -1.51
SFSWAP-211ENST00000542813 GIPC1O14908 333 aa5.64□□□□□ -1.51
SFSWAP-211ENST00000542813 RPLP1P05386 114 aaKnown RBP5.64□□□□□ -1.51
SFSWAP-211ENST00000542813 ATF4P18848 351 aaPredicted RBP5.64□□□□□ -1.51
SFSWAP-211ENST00000542813 CHRNA4P43681 627 aa5.64□□□□□ -1.51
SFSWAP-211ENST00000542813 TAF1CQ15572 869 aaPredicted RBP5.64□□□□□ -1.51
SFSWAP-211ENST00000542813 SAMD5Q5TGI4 173 aa5.64□□□□□ -1.51
SFSWAP-211ENST00000542813 ZNF468Q5VIY5 522 aaPredicted RBP5.64□□□□□ -1.51
SFSWAP-211ENST00000542813 JAZF1Q86VZ6 243 aa5.64□□□□□ -1.51
SFSWAP-211ENST00000542813 L3MBTL2Q969R5 705 aa5.64□□□□□ -1.51
SFSWAP-211ENST00000542813 PHACTR1Q9C0D0 580 aa5.64□□□□□ -1.51
SFSWAP-211ENST00000542813 GGNBP2Q9H3C7 697 aa5.64□□□□□ -1.51
SFSWAP-211ENST00000542813 FAM13BQ9NYF5 915 aa5.64□□□□□ -1.51
SFSWAP-211ENST00000542813 USP31Q70CQ4 1352 aa5.64□□□□□ -1.51
SFSWAP-211ENST00000542813 ST13P50502 369 aaKnown RBP5.63□□□□□ -1.51
SFSWAP-211ENST00000542813 PAK2Q13177 524 aa5.63□□□□□ -1.51
SFSWAP-211ENST00000542813 LAMC2Q13753 1193 aa5.63□□□□□ -1.51
SFSWAP-211ENST00000542813 NFE2L2Q16236 605 aa5.63□□□□□ -1.51
SFSWAP-211ENST00000542813 MEI1Q5TIA1 1274 aa5.63□□□□□ -1.51
SFSWAP-211ENST00000542813 PI16Q6UXB8 463 aa5.63□□□□□ -1.51
SFSWAP-211ENST00000542813 BICDL1Q6ZP65 573 aa5.63□□□□□ -1.51
SFSWAP-211ENST00000542813 Q8N3U1 123 aa5.63□□□□□ -1.51
SFSWAP-211ENST00000542813 GPRASP2Q96D09 838 aa5.63□□□□□ -1.51
SFSWAP-211ENST00000542813 SPACA7Q96KW9 195 aa5.63□□□□□ -1.51
SFSWAP-211ENST00000542813 POLR3GLQ9BT43 218 aa5.63□□□□□ -1.51
SFSWAP-211ENST00000542813 MARK1Q9P0L2 795 aa5.63□□□□□ -1.51
SFSWAP-211ENST00000542813 FAM8A1Q9UBU6 413 aa5.63□□□□□ -1.51
SFSWAP-211ENST00000542813 PRR12Q9ULL5 1215 aa5.63□□□□□ -1.51
SFSWAP-211ENST00000542813 PARP3Q9Y6F1 533 aa5.63□□□□□ -1.51
SFSWAP-211ENST00000542813 EFSO43281 561 aa5.62□□□□□ -1.51
SFSWAP-211ENST00000542813 USP17L7P0C7H9 530 aa5.62□□□□□ -1.51
SFSWAP-211ENST00000542813 PCBP4P57723 403 aaKnown RBP5.62□□□□□ -1.51
SFSWAP-211ENST00000542813 TCEAL1Q15170 157 aa5.62□□□□□ -1.51
SFSWAP-211ENST00000542813 CKAP2LQ8IYA6 745 aa5.62□□□□□ -1.51
SFSWAP-211ENST00000542813 CCDC74AQ96AQ1 378 aa5.62□□□□□ -1.51
SFSWAP-211ENST00000542813 MRFAP1L1Q96HT8 127 aa5.62□□□□□ -1.51
SFSWAP-211ENST00000542813 GPATCH3Q96I76 525 aa5.62□□□□□ -1.51
SFSWAP-211ENST00000542813 OSBPL7Q9BZF2 842 aa5.62□□□□□ -1.51
SFSWAP-211ENST00000542813 DMGDHQ9UI17 866 aaKnown RBP5.62□□□□□ -1.51
SFSWAP-211ENST00000542813 ELOA3CA0A087WX78 387 aaPredicted RBP5.61□□□□□ -1.51
SFSWAP-211ENST00000542813 ELOA3DA6NLF2 546 aaPredicted RBP5.61□□□□□ -1.51
SFSWAP-211ENST00000542813 CLSTN1O94985 981 aa5.61□□□□□ -1.51
SFSWAP-211ENST00000542813 SPATA31C1P0DKV0 1188 aa5.61□□□□□ -1.51
SFSWAP-211ENST00000542813 ELOA3BQ3SY89 546 aa5.61□□□□□ -1.51
SFSWAP-211ENST00000542813 C1orf53Q5VUE5 145 aa5.61□□□□□ -1.51
SFSWAP-211ENST00000542813 USPL1Q5W0Q7 1092 aa5.61□□□□□ -1.51
SFSWAP-211ENST00000542813 ERMP1Q7Z2K6 904 aa5.61□□□□□ -1.51
SFSWAP-211ENST00000542813 ELOA3Q8NG57 546 aa5.61□□□□□ -1.51
SFSWAP-211ENST00000542813 RASGRP4Q8TDF6 673 aa5.61□□□□□ -1.51
SFSWAP-211ENST00000542813 EPS8L3Q8TE67 593 aaKnown RBP5.61□□□□□ -1.51
SFSWAP-211ENST00000542813 TRIM11Q96F44 468 aa5.61□□□□□ -1.51
SFSWAP-211ENST00000542813 PLVAPQ9BX97 442 aa5.61□□□□□ -1.51
SFSWAP-211ENST00000542813 STRN4Q9NRL3 753 aa5.61□□□□□ -1.51
SFSWAP-211ENST00000542813 MRPL42Q9Y6G3 142 aaKnown RBP5.61□□□□□ -1.51
SFSWAP-211ENST00000542813 hCG_2014768A0A024R1R8 64 aa5.6□□□□□ -1.51
SFSWAP-211ENST00000542813 EIF5BO60841 1220 aaKnown RBP5.6□□□□□ -1.51
SFSWAP-211ENST00000542813 TNFRSF21O75509 655 aa5.6□□□□□ -1.51
SFSWAP-211ENST00000542813 MICAL2O94851 1124 aa5.6□□□□□ -1.51
SFSWAP-211ENST00000542813 ALAS2P22557 587 aa5.6□□□□□ -1.51
SFSWAP-211ENST00000542813 TXLNAP40222 546 aa5.6□□□□□ -1.51
SFSWAP-211ENST00000542813 PTPROQ16827 1216 aa5.6□□□□□ -1.51
SFSWAP-211ENST00000542813 NBPF6Q5VWK0 638 aa5.6□□□□□ -1.51
SFSWAP-211ENST00000542813 SNX29Q8TEQ0 813 aa5.6□□□□□ -1.51
SFSWAP-211ENST00000542813 NBPF4Q96M43 638 aa5.6□□□□□ -1.51
SFSWAP-211ENST00000542813 SRCIN1Q9C0H9 1055 aa5.6□□□□□ -1.51
SFSWAP-211ENST00000542813 COPRSQ9NQ92 184 aa5.6□□□□□ -1.51
SFSWAP-211ENST00000542813 FOXD3Q9UJU5 478 aaPredicted RBP5.6□□□□□ -1.51
SFSWAP-211ENST00000542813 BCS1LQ9Y276 419 aa5.6□□□□□ -1.51
SFSWAP-211ENST00000542813 GPC6Q9Y625 555 aaPredicted RBP5.6□□□□□ -1.51
SFSWAP-211ENST00000542813 CCDC180Q9P1Z9 1646 aa5.59□□□□□ -1.51
SFSWAP-211ENST00000542813 SPDYE3A6NKU9 549 aa5.59□□□□□ -1.51
SFSWAP-211ENST00000542813 MARCH6O60337 910 aa5.59□□□□□ -1.51
SFSWAP-211ENST00000542813 RAB11FIP3O75154 756 aa5.59□□□□□ -1.51
SFSWAP-211ENST00000542813 SSBP05455 408 aaKnown RBP eCLIP5.59□□□□□ -1.51
SFSWAP-211ENST00000542813 XRCC5P13010 732 aaKnown RBP5.59□□□□□ -1.51
SFSWAP-211ENST00000542813 HSD3B2P26439 372 aa5.59□□□□□ -1.51
SFSWAP-211ENST00000542813 GATA4P43694 442 aa5.59□□□□□ -1.51
SFSWAP-211ENST00000542813 IGBP1P78318 339 aa5.59□□□□□ -1.51
SFSWAP-211ENST00000542813 HIF1AQ16665 826 aa5.59□□□□□ -1.51
SFSWAP-211ENST00000542813 SYT9Q86SS6 491 aa5.59□□□□□ -1.51
SFSWAP-211ENST00000542813 MICAL1Q8TDZ2 1067 aa5.59□□□□□ -1.51
SFSWAP-211ENST00000542813 KCNB2Q92953 911 aa5.59□□□□□ -1.51
SFSWAP-211ENST00000542813 NEUROD4Q9HD90 331 aa5.59□□□□□ -1.51
SFSWAP-211ENST00000542813 TGFBR3LH3BV60 316 aa5.58□□□□□ -1.52
SFSWAP-211ENST00000542813 SIN3BO75182 1162 aa5.58□□□□□ -1.52
SFSWAP-211ENST00000542813 IBSPP21815 317 aaPredicted RBP5.58□□□□□ -1.52
SFSWAP-211ENST00000542813 SERINC3Q13530 473 aa5.58□□□□□ -1.52
SFSWAP-211ENST00000542813 DOC2BQ14184 412 aa5.58□□□□□ -1.52
SFSWAP-211ENST00000542813 NOL8Q76FK4 1167 aaKnown RBP5.58□□□□□ -1.52
SFSWAP-211ENST00000542813 ZNF438Q7Z4V0 828 aa5.58□□□□□ -1.52
SFSWAP-211ENST00000542813 RHPN1Q8TCX5 695 aa5.58□□□□□ -1.52
SFSWAP-211ENST00000542813 SEC16BQ96JE7 1060 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms