RNA–Protein interactions for RNA: ENST00000542140.5

RBM7-205, Transcript of RNA binding motif protein 7, humanhuman

TSL 1 (best)

Gene RBM7, Length 1,908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM7-205ENST00000542140 LRP10Q7Z4F1 713 aa12.51□□□□□ -0.41
RBM7-205ENST00000542140 PNISRQ8TF01 805 aaKnown RBP12.51□□□□□ -0.41
RBM7-205ENST00000542140 NECTIN2Q92692 538 aa12.51□□□□□ -0.41
RBM7-205ENST00000542140 SLC10A4Q96EP9 437 aa12.51□□□□□ -0.41
RBM7-205ENST00000542140 LRCH3Q96II8 777 aa12.51□□□□□ -0.41
RBM7-205ENST00000542140 WNK4Q96J92 1243 aa12.51□□□□□ -0.41
RBM7-205ENST00000542140 ANKIB1Q9P2G1 1089 aa12.51□□□□□ -0.41
RBM7-205ENST00000542140 VCANP13611 3396 aa12.51□□□□□ -0.41
RBM7-205ENST00000542140 WTIPA6NIX2 430 aaPredicted RBP12.5□□□□□ -0.41
RBM7-205ENST00000542140 WNT10BO00744 389 aa12.5□□□□□ -0.41
RBM7-205ENST00000542140 U2AF1L5P0DN76 240 aaPredicted RBP12.5□□□□□ -0.41
RBM7-205ENST00000542140 EIF2S2P20042 333 aaKnown RBP12.5□□□□□ -0.41
RBM7-205ENST00000542140 U2AF1Q01081 240 aaKnown RBP eCLIP12.5□□□□□ -0.41
RBM7-205ENST00000542140 AIMP1Q12904 312 aaKnown RBP12.5□□□□□ -0.41
RBM7-205ENST00000542140 CLMNQ96JQ2 1002 aa12.5□□□□□ -0.41
RBM7-205ENST00000542140 U3KPZ7 1027 aaPredicted RBP12.5□□□□□ -0.41
RBM7-205ENST00000542140 ZBTB48P10074 688 aaPredicted RBP12.5□□□□□ -0.41
RBM7-205ENST00000542140 SH3TC2Q8TF17 1288 aa12.5□□□□□ -0.41
RBM7-205ENST00000542140 PRO3102Q9H379 93 aa12.5□□□□□ -0.41
RBM7-205ENST00000542140 SPINK5Q9NQ38 1064 aaPredicted RBP12.5□□□□□ -0.41
RBM7-205ENST00000542140 GGA1Q9UJY5 639 aa12.5□□□□□ -0.41
RBM7-205ENST00000542140 USP17L3A6NCW0 530 aa12.49□□□□□ -0.41
RBM7-205ENST00000542140 USP17L4A6NCW7 530 aa12.49□□□□□ -0.41
RBM7-205ENST00000542140 PDIA6Q15084 440 aa12.49□□□□□ -0.41
RBM7-205ENST00000542140 OTUD7BQ6GQQ9 843 aa12.49□□□□□ -0.41
RBM7-205ENST00000542140 USP17L1Q7RTZ2 530 aa12.49□□□□□ -0.41
RBM7-205ENST00000542140 RTL5Q5HYW3 569 aaPredicted RBP12.49□□□□□ -0.41
RBM7-205ENST00000542140 FBXW7Q969H0 707 aa12.49□□□□□ -0.41
RBM7-205ENST00000542140 CFAP53Q96M91 514 aa12.49□□□□□ -0.41
RBM7-205ENST00000542140 MXD3Q9BW11 206 aa12.49□□□□□ -0.41
RBM7-205ENST00000542140 PODXL2Q9NZ53 605 aa12.49□□□□□ -0.41
RBM7-205ENST00000542140 RPS8P62241 208 aaKnown RBP12.48□□□□□ -0.41
RBM7-205ENST00000542140 SF3B3Q15393 1217 aaKnown RBP12.48□□□□□ -0.41
RBM7-205ENST00000542140 COPS6Q7L5N1 327 aa12.48□□□□□ -0.41
RBM7-205ENST00000542140 APOBEC3FQ8IUX4 373 aaKnown RBP12.48□□□□□ -0.41
RBM7-205ENST00000542140 OGFOD1Q8N543 542 aa12.48□□□□□ -0.41
RBM7-205ENST00000542140 XAGE3Q8WTP9 111 aa12.48□□□□□ -0.41
RBM7-205ENST00000542140 SHISA4Q96DD7 197 aa12.48□□□□□ -0.41
RBM7-205ENST00000542140 FAM89AQ96GI7 184 aa12.48□□□□□ -0.41
RBM7-205ENST00000542140 COL25A1Q9BXS0 654 aaPredicted RBP12.48□□□□□ -0.41
RBM7-205ENST00000542140 NUDCQ9Y266 331 aa12.48□□□□□ -0.41
RBM7-205ENST00000542140 SSC5DA1L4H1 1573 aa12.48□□□□□ -0.41
RBM7-205ENST00000542140 PER1O15534 1290 aaPredicted RBP12.47□□□□□ -0.41
RBM7-205ENST00000542140 COL1A1P02452 1464 aaPredicted RBP12.46□□□□□ -0.41
RBM7-205ENST00000542140 GJA5P36382 358 aa12.46□□□□□ -0.42
RBM7-205ENST00000542140 ARHGEF6Q15052 776 aa12.46□□□□□ -0.42
RBM7-205ENST00000542140 PTPN18Q99952 460 aa12.46□□□□□ -0.42
RBM7-205ENST00000542140 HTATIP2Q9BUP3 242 aa12.45□□□□□ -0.42
RBM7-205ENST00000542140 SEC31BQ9NQW1 1179 aa12.45□□□□□ -0.42
RBM7-205ENST00000542140 NR2E3Q9Y5X4 410 aa12.45□□□□□ -0.42
RBM7-205ENST00000542140 ALPK3Q96L96 1907 aa12.45□□□□□ -0.42
RBM7-205ENST00000542140 SPTBN5Q9NRC6 3674 aaKnown RBP12.45□□□□□ -0.42
RBM7-205ENST00000542140 A0A1W2PPC1 479 aa12.45□□□□□ -0.42
RBM7-205ENST00000542140 PODNQ7Z5L7 613 aa12.45□□□□□ -0.42
RBM7-205ENST00000542140 PPP1R12BO60237 982 aaPredicted RBP12.44□□□□□ -0.42
RBM7-205ENST00000542140 MTFR1Q15390 333 aa12.44□□□□□ -0.42
RBM7-205ENST00000542140 TAF1CQ15572 869 aaPredicted RBP12.44□□□□□ -0.42
RBM7-205ENST00000542140 MAP3K11Q16584 847 aa12.44□□□□□ -0.42
RBM7-205ENST00000542140 DACT2Q5SW24 774 aa12.44□□□□□ -0.42
RBM7-205ENST00000542140 EYSQ5T1H1 3165 aa12.43□□□□□ -0.42
RBM7-205ENST00000542140 ATP5J2-PTCD1G3V325 749 aa12.43□□□□□ -0.42
RBM7-205ENST00000542140 IRS4O14654 1257 aaPredicted RBP12.43□□□□□ -0.42
RBM7-205ENST00000542140 ZBTB7BO15156 539 aaPredicted RBP12.43□□□□□ -0.42
RBM7-205ENST00000542140 Q7L0L9 218 aa12.43□□□□□ -0.42
RBM7-205ENST00000542140 DEFB123Q8N688 67 aa12.43□□□□□ -0.42
RBM7-205ENST00000542140 ARHGAP39Q9C0H5 1083 aa12.43□□□□□ -0.42
RBM7-205ENST00000542140 TIMELESSQ9UNS1 1208 aa12.43□□□□□ -0.42
RBM7-205ENST00000542140 XDHP47989 1333 aa12.43□□□□□ -0.42
RBM7-205ENST00000542140 MYO3BQ8WXR4 1341 aa12.43□□□□□ -0.42
RBM7-205ENST00000542140 DEFB129Q9H1M3 183 aa12.43□□□□□ -0.42
RBM7-205ENST00000542140 TSPYL4Q9UJ04 414 aa12.43□□□□□ -0.42
RBM7-205ENST00000542140 ECM2O94769 699 aaPredicted RBP12.42□□□□□ -0.42
RBM7-205ENST00000542140 ZFYVE28Q9HCC9 887 aa12.42□□□□□ -0.42
RBM7-205ENST00000542140 NEFMP07197 916 aa12.41□□□□□ -0.42
RBM7-205ENST00000542140 KIAA0825Q8IV33 1275 aa12.41□□□□□ -0.42
RBM7-205ENST00000542140 STXBP5LQ9Y2K9 1186 aa12.41□□□□□ -0.42
RBM7-205ENST00000542140 MYH3P11055 1940 aa12.41□□□□□ -0.42
RBM7-205ENST00000542140 MED23Q9ULK4 1368 aa12.41□□□□□ -0.42
RBM7-205ENST00000542140 TESPA1A2RU30 521 aaPredicted RBP12.41□□□□□ -0.42
RBM7-205ENST00000542140 IREB2P48200 963 aaKnown RBP12.41□□□□□ -0.42
RBM7-205ENST00000542140 CCDC85AQ96PX6 553 aaPredicted RBP12.41□□□□□ -0.42
RBM7-205ENST00000542140 ELP3Q9H9T3 547 aa12.41□□□□□ -0.42
RBM7-205ENST00000542140 STAP2Q9UGK3 403 aa12.41□□□□□ -0.42
RBM7-205ENST00000542140 ATP2B4P23634 1241 aa12.4□□□□□ -0.42
RBM7-205ENST00000542140 KIF22Q14807 665 aa12.4□□□□□ -0.42
RBM7-205ENST00000542140 UBE2Q1Q7Z7E8 422 aa12.4□□□□□ -0.42
RBM7-205ENST00000542140 NKX2-3Q8TAU0 364 aa12.4□□□□□ -0.42
RBM7-205ENST00000542140 OPTNQ96CV9 577 aa12.4□□□□□ -0.42
RBM7-205ENST00000542140 ISCA1Q9BUE6 129 aa12.4□□□□□ -0.42
RBM7-205ENST00000542140 LAMA2P24043 3122 aaKnown RBP12.4□□□□□ -0.42
RBM7-205ENST00000542140 NPM3O75607 178 aaKnown RBP12.39□□□□□ -0.43
RBM7-205ENST00000542140 STRIP1Q5VSL9 837 aa12.39□□□□□ -0.43
RBM7-205ENST00000542140 ANKRD13DQ6ZTN6 518 aa12.39□□□□□ -0.43
RBM7-205ENST00000542140 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.39□□□□□ -0.43
RBM7-205ENST00000542140 ANKRD13AQ8IZ07 590 aa12.39□□□□□ -0.43
RBM7-205ENST00000542140 BRI3BPQ8WY22 251 aa12.39□□□□□ -0.43
RBM7-205ENST00000542140 ZBED3Q96IU2 234 aaPredicted RBP12.39□□□□□ -0.43
RBM7-205ENST00000542140 PRUNE2Q8WUY3 3088 aa12.39□□□□□ -0.43
RBM7-205ENST00000542140 CCL15-CCL14A0A0B4J2E2 113 aa12.39□□□□□ -0.43
RBM7-205ENST00000542140 FARP2O94887 1054 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms