RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-208ENST00000541795 TICAM2Q86XR7 235 aa21.34■■□□□ 1.01
RAB6A-208ENST00000541795 KIF2CQ99661 725 aa21.34■■□□□ 1.01
RAB6A-208ENST00000541795 ANTXR1Q9H6X2 564 aa21.34■■□□□ 1.01
RAB6A-208ENST00000541795 MYH7P12883 1935 aa21.34■■□□□ 1.01
RAB6A-208ENST00000541795 KLRG2A4D1S0 409 aaPredicted RBP21.34■■□□□ 1.01
RAB6A-208ENST00000541795 PI16Q6UXB8 463 aa21.34■■□□□ 1.01
RAB6A-208ENST00000541795 BRIP1Q9BX63 1249 aa21.34■■□□□ 1.01
RAB6A-208ENST00000541795 MCCP23508 829 aa21.33■■□□□ 1.01
RAB6A-208ENST00000541795 CCDC125Q86Z20 511 aa21.33■■□□□ 1.01
RAB6A-208ENST00000541795 LSG1Q9H089 658 aaKnown RBP21.33■■□□□ 1.01
RAB6A-208ENST00000541795 KCNJ4P48050 445 aa21.32■■□□□ 1
RAB6A-208ENST00000541795 MED23Q9ULK4 1368 aa21.32■■□□□ 1
RAB6A-208ENST00000541795 HOXA10P31260 410 aaPredicted RBP21.32■■□□□ 1
RAB6A-208ENST00000541795 BCAMP50895 628 aa21.31■■□□□ 1
RAB6A-208ENST00000541795 BECN1Q14457 450 aa21.31■■□□□ 1
RAB6A-208ENST00000541795 LRRFIP1Q32MZ4 808 aaKnown RBP21.3■■□□□ 1
RAB6A-208ENST00000541795 CRAMP1Q96RY5 1269 aa21.3■■□□□ 1
RAB6A-208ENST00000541795 DAXXQ9UER7 740 aaPredicted RBP21.3■■□□□ 1
RAB6A-208ENST00000541795 COL11A2P13942 1736 aaPredicted RBP21.3■■□□□ 1
RAB6A-208ENST00000541795 WTIPA6NIX2 430 aaPredicted RBP21.29■■□□□ 1
RAB6A-208ENST00000541795 CHGBP05060 677 aa21.29■■□□□ 1
RAB6A-208ENST00000541795 RASGRF1Q13972 1273 aa21.29■■□□□ 1
RAB6A-208ENST00000541795 TTF1Q15361 905 aaPredicted RBP21.29■■□□□ 1
RAB6A-208ENST00000541795 SPATA5Q8NB90 893 aa21.29■■□□□ 1
RAB6A-208ENST00000541795 HMG20BQ9P0W2 317 aa21.29■■□□□ 1
RAB6A-208ENST00000541795 MYO5AQ9Y4I1 1855 aaKnown RBP21.29■■□□□ 1
RAB6A-208ENST00000541795 ZNF804BA4D1E1 1349 aa21.29■■□□□ 1
RAB6A-208ENST00000541795 CYP2E1P05181 493 aaPredicted RBP21.29■■□□□ 1
RAB6A-208ENST00000541795 PDE6BP35913 854 aa21.29■■□□□ 1
RAB6A-208ENST00000541795 CCDC171Q6TFL3 1326 aa21.28■■□□□ 1
RAB6A-208ENST00000541795 RNF113AO15541 343 aaKnown RBP21.28■■□□□ 1
RAB6A-208ENST00000541795 BBOX1O75936 387 aa21.28■■□□□ 1
RAB6A-208ENST00000541795 GYG1P46976 350 aa21.28■■□□□ 1
RAB6A-208ENST00000541795 CAVIN4Q5BKX8 364 aa21.28■■□□□ 1
RAB6A-208ENST00000541795 ZNF589Q86UQ0 364 aaPredicted RBP21.28■■□□□ 1
RAB6A-208ENST00000541795 ANKIB1Q9P2G1 1089 aa21.28■■□□□ 1
RAB6A-208ENST00000541795 DOCK2Q92608 1830 aa21.28■■□□□ 1
RAB6A-208ENST00000541795 LRRC37AA6NMS7 1700 aa21.27■■□□□ 1
RAB6A-208ENST00000541795 PTH1RQ03431 593 aa21.27■■□□□ 1
RAB6A-208ENST00000541795 MCMDC2Q4G0Z9 681 aa21.27■■□□□ 1
RAB6A-208ENST00000541795 ZMYM1Q5SVZ6 1142 aa21.27■■□□□ 1
RAB6A-208ENST00000541795 HELLSQ9NRZ9 838 aa21.27■■□□□ 1
RAB6A-208ENST00000541795 GNL3LQ9NVN8 582 aaKnown RBP21.27■■□□□ 1
RAB6A-208ENST00000541795 XDHP47989 1333 aa21.27■■□□□ 1
RAB6A-208ENST00000541795 MYH13Q9UKX3 1938 aa21.27■■□□□ 1
RAB6A-208ENST00000541795 ZFYP08048 801 aaPredicted RBP21.27■□□□□ 0.99
RAB6A-208ENST00000541795 SRGNP10124 158 aa21.27■□□□□ 0.99
RAB6A-208ENST00000541795 HSPA4P34932 840 aa21.27■□□□□ 0.99
RAB6A-208ENST00000541795 RABEP1Q15276 862 aa21.27■□□□□ 0.99
RAB6A-208ENST00000541795 SLC51AQ86UW1 340 aa21.27■□□□□ 0.99
RAB6A-208ENST00000541795 VPS37DQ86XT2 251 aa21.27■□□□□ 0.99
RAB6A-208ENST00000541795 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.27■□□□□ 0.99
RAB6A-208ENST00000541795 NPR1P16066 1061 aa21.26■□□□□ 0.99
RAB6A-208ENST00000541795 SLC4A3P48751 1232 aa21.26■□□□□ 0.99
RAB6A-208ENST00000541795 ANAPC15P60006 121 aa21.26■□□□□ 0.99
RAB6A-208ENST00000541795 SLFNL1Q499Z3 407 aa21.26■□□□□ 0.99
RAB6A-208ENST00000541795 FAM84BQ96KN1 310 aaPredicted RBP21.26■□□□□ 0.99
RAB6A-208ENST00000541795 SEC62Q99442 399 aaKnown RBP21.26■□□□□ 0.99
RAB6A-208ENST00000541795 TBC1D2Q9BYX2 928 aa21.26■□□□□ 0.99
RAB6A-208ENST00000541795 PDGFDQ9GZP0 370 aaPredicted RBP21.26■□□□□ 0.99
RAB6A-208ENST00000541795 PIH1D3Q9NQM4 214 aaKnown RBP21.26■□□□□ 0.99
RAB6A-208ENST00000541795 PALD1Q9ULE6 856 aa21.26■□□□□ 0.99
RAB6A-208ENST00000541795 LEMD3Q9Y2U8 911 aa21.26■□□□□ 0.99
RAB6A-208ENST00000541795 KLRK1P26718 216 aa21.25■□□□□ 0.99
RAB6A-208ENST00000541795 ZSCAN25Q6NSZ9 544 aa21.25■□□□□ 0.99
RAB6A-208ENST00000541795 CCDC129Q6ZRS4 1044 aa21.25■□□□□ 0.99
RAB6A-208ENST00000541795 TMC4Q7Z404 712 aa21.25■□□□□ 0.99
RAB6A-208ENST00000541795 FBXO33Q7Z6M2 555 aa21.25■□□□□ 0.99
RAB6A-208ENST00000541795 PPEF1O14829 653 aaPredicted RBP21.24■□□□□ 0.99
RAB6A-208ENST00000541795 MAP4K1Q92918 833 aa21.24■□□□□ 0.99
RAB6A-208ENST00000541795 SNX21Q969T3 373 aa21.24■□□□□ 0.99
RAB6A-208ENST00000541795 CACNA1SQ13698 1873 aa21.24■□□□□ 0.99
RAB6A-208ENST00000541795 IDH1O75874 414 aaKnown RBP21.23■□□□□ 0.99
RAB6A-208ENST00000541795 GPSM2P81274 684 aa21.23■□□□□ 0.99
RAB6A-208ENST00000541795 HSCBQ8IWL3 235 aa21.23■□□□□ 0.99
RAB6A-208ENST00000541795 IQSEC3Q9UPP2 1182 aaPredicted RBP21.23■□□□□ 0.99
RAB6A-208ENST00000541795 MAST3O60307 1309 aa21.23■□□□□ 0.99
RAB6A-208ENST00000541795 IRS2Q9Y4H2 1338 aa21.23■□□□□ 0.99
RAB6A-208ENST00000541795 HIBADHP31937 336 aaKnown RBP21.22■□□□□ 0.99
RAB6A-208ENST00000541795 WASHC4Q2M389 1173 aa21.22■□□□□ 0.99
RAB6A-208ENST00000541795 IL17RAQ96F46 866 aa21.22■□□□□ 0.99
RAB6A-208ENST00000541795 MASTLQ96GX5 879 aa21.22■□□□□ 0.99
RAB6A-208ENST00000541795 RBM8AQ9Y5S9 174 aaKnown RBP21.22■□□□□ 0.99
RAB6A-208ENST00000541795 COL1A1P02452 1464 aaPredicted RBP21.22■□□□□ 0.99
RAB6A-208ENST00000541795 ALDH1B1P30837 517 aa21.22■□□□□ 0.99
RAB6A-208ENST00000541795 ADD2P35612 726 aa21.22■□□□□ 0.99
RAB6A-208ENST00000541795 SLC16A10Q8TF71 515 aa21.22■□□□□ 0.99
RAB6A-208ENST00000541795 APPBP2Q92624 585 aa21.22■□□□□ 0.99
RAB6A-208ENST00000541795 DENND2AQ9ULE3 1009 aa21.22■□□□□ 0.99
RAB6A-208ENST00000541795 NSFL1CQ9UNZ2 370 aaKnown RBP21.22■□□□□ 0.99
RAB6A-208ENST00000541795 LTBP1Q14766 1721 aa21.21■□□□□ 0.99
RAB6A-208ENST00000541795 M0R2C6 588 aa21.21■□□□□ 0.99
RAB6A-208ENST00000541795 SEMA3EO15041 775 aa21.21■□□□□ 0.99
RAB6A-208ENST00000541795 SLC9C2Q5TAH2 1124 aa21.21■□□□□ 0.99
RAB6A-208ENST00000541795 OSBP2Q969R2 916 aa21.21■□□□□ 0.99
RAB6A-208ENST00000541795 UFL1O94874 794 aa21.2■□□□□ 0.98
RAB6A-208ENST00000541795 ATP2B4P23634 1241 aa21.2■□□□□ 0.98
RAB6A-208ENST00000541795 MAP3K12Q12852 859 aa21.2■□□□□ 0.98
RAB6A-208ENST00000541795 NECTIN1Q15223 517 aa21.2■□□□□ 0.98
RAB6A-208ENST00000541795 PRPF40BQ6NWY9 871 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms