RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 MAP4K1Q92918 833 aa20.4■□□□□ 0.86
SPIDR-227ENST00000541342 UTP14AQ9BVJ6 771 aaKnown RBP20.4■□□□□ 0.86
SPIDR-227ENST00000541342 PRPF40BQ6NWY9 871 aaKnown RBP20.39■□□□□ 0.86
SPIDR-227ENST00000541342 AEBP2Q6ZN18 517 aaPredicted RBP20.39■□□□□ 0.86
SPIDR-227ENST00000541342 FAM184AQ8NB25 1140 aa20.39■□□□□ 0.86
SPIDR-227ENST00000541342 ZMYND15Q9H091 742 aa20.39■□□□□ 0.86
SPIDR-227ENST00000541342 FAM13BQ9NYF5 915 aa20.39■□□□□ 0.86
SPIDR-227ENST00000541342 NIP7Q9Y221 180 aaKnown RBP eCLIP20.39■□□□□ 0.86
SPIDR-227ENST00000541342 ATRNO75882 1429 aa20.39■□□□□ 0.85
SPIDR-227ENST00000541342 UBE2HP62256 183 aa20.39■□□□□ 0.85
SPIDR-227ENST00000541342 KCNB2Q92953 911 aa20.39■□□□□ 0.85
SPIDR-227ENST00000541342 XAGE2Q96GT9 111 aa20.39■□□□□ 0.85
SPIDR-227ENST00000541342 PAG1Q9NWQ8 432 aa20.39■□□□□ 0.85
SPIDR-227ENST00000541342 GOLIM4O00461 696 aa20.38■□□□□ 0.85
SPIDR-227ENST00000541342 NTSR2O95665 410 aa20.38■□□□□ 0.85
SPIDR-227ENST00000541342 UVSSAQ2YD98 709 aa20.38■□□□□ 0.85
SPIDR-227ENST00000541342 TPRNQ4KMQ1 711 aa20.38■□□□□ 0.85
SPIDR-227ENST00000541342 KBTBD3Q8NAB2 608 aa20.38■□□□□ 0.85
SPIDR-227ENST00000541342 ZNF830Q96NB3 372 aaPredicted RBP20.38■□□□□ 0.85
SPIDR-227ENST00000541342 FUCA2Q9BTY2 467 aa20.38■□□□□ 0.85
SPIDR-227ENST00000541342 AKAP2Q9Y2D5 859 aa20.38■□□□□ 0.85
SPIDR-227ENST00000541342 RBM8AQ9Y5S9 174 aaKnown RBP20.38■□□□□ 0.85
SPIDR-227ENST00000541342 CNTNAP4Q9C0A0 1308 aa20.38■□□□□ 0.85
SPIDR-227ENST00000541342 PTMAP06454 111 aaKnown RBP20.38■□□□□ 0.85
SPIDR-227ENST00000541342 PARP10Q53GL7 1025 aa20.38■□□□□ 0.85
SPIDR-227ENST00000541342 AK7Q96M32 723 aa20.38■□□□□ 0.85
SPIDR-227ENST00000541342 COL9A3Q14050 684 aaPredicted RBP20.38■□□□□ 0.85
SPIDR-227ENST00000541342 VGLL2Q8N8G2 317 aa20.38■□□□□ 0.85
SPIDR-227ENST00000541342 SPEF2Q9C093 1822 aa20.37■□□□□ 0.85
SPIDR-227ENST00000541342 KIAA2012Q0VF49 1180 aa20.37■□□□□ 0.85
SPIDR-227ENST00000541342 METTL24Q5JXM2 366 aa20.37■□□□□ 0.85
SPIDR-227ENST00000541342 SASS6Q6UVJ0 657 aa20.37■□□□□ 0.85
SPIDR-227ENST00000541342 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.37■□□□□ 0.85
SPIDR-227ENST00000541342 LY75O60449 1722 aa20.37■□□□□ 0.85
SPIDR-227ENST00000541342 SCN7AQ01118 1682 aa20.37■□□□□ 0.85
SPIDR-227ENST00000541342 FIBPO43427 364 aa20.37■□□□□ 0.85
SPIDR-227ENST00000541342 IFIT1P09914 478 aaKnown RBP20.37■□□□□ 0.85
SPIDR-227ENST00000541342 SEC62Q99442 399 aaKnown RBP20.37■□□□□ 0.85
SPIDR-227ENST00000541342 ONECUT3O60422 494 aaPredicted RBP20.37■□□□□ 0.85
SPIDR-227ENST00000541342 CNNM1Q9NRU3 951 aa20.37■□□□□ 0.85
SPIDR-227ENST00000541342 SMC3Q9UQE7 1217 aa20.37■□□□□ 0.85
SPIDR-227ENST00000541342 MTMR6Q9Y217 621 aa20.37■□□□□ 0.85
SPIDR-227ENST00000541342 TAF1LQ8IZX4 1826 aa20.36■□□□□ 0.85
SPIDR-227ENST00000541342 SLFNL1Q499Z3 407 aa20.36■□□□□ 0.85
SPIDR-227ENST00000541342 CCDC83Q8IWF9 413 aa20.36■□□□□ 0.85
SPIDR-227ENST00000541342 ADCY5O95622 1261 aa20.36■□□□□ 0.85
SPIDR-227ENST00000541342 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.36■□□□□ 0.85
SPIDR-227ENST00000541342 TAF5LO75529 589 aa20.35■□□□□ 0.85
SPIDR-227ENST00000541342 GJB2P29033 226 aa20.35■□□□□ 0.85
SPIDR-227ENST00000541342 CREB3L3Q68CJ9 461 aa20.35■□□□□ 0.85
SPIDR-227ENST00000541342 CASZ1Q86V15 1759 aa20.35■□□□□ 0.85
SPIDR-227ENST00000541342 CCDC129Q6ZRS4 1044 aa20.35■□□□□ 0.85
SPIDR-227ENST00000541342 DNM1Q05193 864 aaKnown RBP20.35■□□□□ 0.85
SPIDR-227ENST00000541342 ATP2B3Q16720 1220 aa20.35■□□□□ 0.85
SPIDR-227ENST00000541342 ZSWIM6Q9HCJ5 1215 aa20.35■□□□□ 0.85
SPIDR-227ENST00000541342 DYNC1I1O14576 645 aa20.34■□□□□ 0.85
SPIDR-227ENST00000541342 AP5Z1O43299 807 aa20.34■□□□□ 0.85
SPIDR-227ENST00000541342 SCARF1Q14162 830 aa20.34■□□□□ 0.85
SPIDR-227ENST00000541342 VPS53Q5VIR6 699 aa20.34■□□□□ 0.85
SPIDR-227ENST00000541342 CLEC4GQ6UXB4 293 aa20.34■□□□□ 0.85
SPIDR-227ENST00000541342 JAKMIP1Q96N16 626 aaKnown RBP20.34■□□□□ 0.85
SPIDR-227ENST00000541342 ZNF652Q9Y2D9 606 aa20.34■□□□□ 0.85
SPIDR-227ENST00000541342 COL4A1P02462 1669 aa20.34■□□□□ 0.85
SPIDR-227ENST00000541342 TTC12Q9H892 705 aaPredicted RBP20.34■□□□□ 0.85
SPIDR-227ENST00000541342 SEC31BQ9NQW1 1179 aa20.34■□□□□ 0.85
SPIDR-227ENST00000541342 AKAP11Q9UKA4 1901 aa20.34■□□□□ 0.85
SPIDR-227ENST00000541342 SLC27A2O14975 620 aa20.33■□□□□ 0.85
SPIDR-227ENST00000541342 CCDC158Q5M9N0 1113 aa20.33■□□□□ 0.85
SPIDR-227ENST00000541342 TTC39AQ5SRH9 613 aa20.33■□□□□ 0.85
SPIDR-227ENST00000541342 GIMAP6Q6P9H5 292 aa20.33■□□□□ 0.85
SPIDR-227ENST00000541342 SEPT12Q8IYM1 358 aa20.33■□□□□ 0.85
SPIDR-227ENST00000541342 TRPC5Q9UL62 973 aaPredicted RBP20.33■□□□□ 0.85
SPIDR-227ENST00000541342 GORABQ5T7V8 394 aa20.33■□□□□ 0.85
SPIDR-227ENST00000541342 C17orf53Q8N3J3 647 aaPredicted RBP20.33■□□□□ 0.85
SPIDR-227ENST00000541342 PIBF1Q8WXW3 757 aa20.33■□□□□ 0.85
SPIDR-227ENST00000541342 TAF6LQ9Y6J9 622 aa20.33■□□□□ 0.85
SPIDR-227ENST00000541342 ME3Q16798 604 aa20.33■□□□□ 0.84
SPIDR-227ENST00000541342 RC3H1Q5TC82 1133 aaKnown RBP20.33■□□□□ 0.84
SPIDR-227ENST00000541342 AMIGO3Q86WK7 504 aa20.33■□□□□ 0.84
SPIDR-227ENST00000541342 BCL2L12Q9HB09 334 aa20.33■□□□□ 0.84
SPIDR-227ENST00000541342 PDRG1Q9NUG6 133 aa20.33■□□□□ 0.84
SPIDR-227ENST00000541342 CCNL1Q9UK58 526 aaPredicted RBP20.33■□□□□ 0.84
SPIDR-227ENST00000541342 PDE8BO95263 885 aa20.32■□□□□ 0.84
SPIDR-227ENST00000541342 KCNJ4P48050 445 aa20.32■□□□□ 0.84
SPIDR-227ENST00000541342 MCMDC2Q4G0Z9 681 aa20.32■□□□□ 0.84
SPIDR-227ENST00000541342 ARAP2Q8WZ64 1704 aa20.32■□□□□ 0.84
SPIDR-227ENST00000541342 LETM1O95202 739 aaPredicted RBP20.32■□□□□ 0.84
SPIDR-227ENST00000541342 FKBP4Q02790 459 aaKnown RBP eCLIP20.32■□□□□ 0.84
SPIDR-227ENST00000541342 TM6SF1Q9BZW5 370 aa20.32■□□□□ 0.84
SPIDR-227ENST00000541342 KDM4AO75164 1064 aa20.31■□□□□ 0.84
SPIDR-227ENST00000541342 PI16Q6UXB8 463 aa20.31■□□□□ 0.84
SPIDR-227ENST00000541342 RPS6KA4O75676 772 aa20.3■□□□□ 0.84
SPIDR-227ENST00000541342 USPL1Q5W0Q7 1092 aa20.3■□□□□ 0.84
SPIDR-227ENST00000541342 HELBQ8NG08 1087 aaPredicted RBP20.3■□□□□ 0.84
SPIDR-227ENST00000541342 TBC1D9BQ66K14 1250 aa20.3■□□□□ 0.84
SPIDR-227ENST00000541342 NECAB1Q8N987 351 aa20.3■□□□□ 0.84
SPIDR-227ENST00000541342 SRP68Q9UHB9 627 aaKnown RBP20.3■□□□□ 0.84
SPIDR-227ENST00000541342 ATP6V1DQ9Y5K8 247 aa20.3■□□□□ 0.84
SPIDR-227ENST00000541342 ABCC12Q96J65 1359 aa20.3■□□□□ 0.84
SPIDR-227ENST00000541342 GNPATO15228 680 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms