RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 CELF1Q92879 486 aaKnown RBP17.3■□□□□ 0.36
CYB561A3-216ENST00000540755 C22orf23Q9BZE7 217 aa17.3■□□□□ 0.36
CYB561A3-216ENST00000540755 RPS8P62241 208 aaKnown RBP17.29■□□□□ 0.36
CYB561A3-216ENST00000540755 CHRNDQ07001 517 aa17.29■□□□□ 0.36
CYB561A3-216ENST00000540755 CRY2Q49AN0 593 aa17.29■□□□□ 0.36
CYB561A3-216ENST00000540755 ESYT1Q9BSJ8 1104 aa17.29■□□□□ 0.36
CYB561A3-216ENST00000540755 AKAP11Q9UKA4 1901 aa17.28■□□□□ 0.36
CYB561A3-216ENST00000540755 HIP1O00291 1037 aa17.28■□□□□ 0.36
CYB561A3-216ENST00000540755 REC8O95072 547 aa17.28■□□□□ 0.36
CYB561A3-216ENST00000540755 SLC5A1P13866 664 aa17.28■□□□□ 0.36
CYB561A3-216ENST00000540755 ADORA1P30542 326 aa17.28■□□□□ 0.36
CYB561A3-216ENST00000540755 RBM25P49756 843 aaKnown RBP17.28■□□□□ 0.36
CYB561A3-216ENST00000540755 PRELPP51888 382 aa17.28■□□□□ 0.36
CYB561A3-216ENST00000540755 RASSF7Q02833 373 aa17.28■□□□□ 0.36
CYB561A3-216ENST00000540755 ZNF512BQ96KM6 892 aaPredicted RBP17.28■□□□□ 0.36
CYB561A3-216ENST00000540755 RNF181Q9P0P0 153 aa17.28■□□□□ 0.36
CYB561A3-216ENST00000540755 KLRG2A4D1S0 409 aaPredicted RBP17.27■□□□□ 0.36
CYB561A3-216ENST00000540755 TTC39AQ5SRH9 613 aa17.27■□□□□ 0.36
CYB561A3-216ENST00000540755 GORABQ5T7V8 394 aa17.27■□□□□ 0.36
CYB561A3-216ENST00000540755 TICAM2Q86XR7 235 aa17.27■□□□□ 0.36
CYB561A3-216ENST00000540755 C2CD5Q86YS7 1000 aa17.27■□□□□ 0.36
CYB561A3-216ENST00000540755 TIAM2Q8IVF5 1701 aa17.27■□□□□ 0.36
CYB561A3-216ENST00000540755 IFIT1P09914 478 aaKnown RBP17.26■□□□□ 0.35
CYB561A3-216ENST00000540755 GRAPQ13588 217 aa17.26■□□□□ 0.35
CYB561A3-216ENST00000540755 HELBQ8NG08 1087 aaPredicted RBP17.26■□□□□ 0.35
CYB561A3-216ENST00000540755 GRAPLQ8TC17 118 aaPredicted RBP17.26■□□□□ 0.35
CYB561A3-216ENST00000540755 MINPP1Q9UNW1 487 aa17.26■□□□□ 0.35
CYB561A3-216ENST00000540755 EPB41L2O43491 1005 aaKnown RBP17.25■□□□□ 0.35
CYB561A3-216ENST00000540755 TAF5LO75529 589 aa17.25■□□□□ 0.35
CYB561A3-216ENST00000540755 RUFY2Q8WXA3 655 aa17.25■□□□□ 0.35
CYB561A3-216ENST00000540755 DNAJC2Q99543 621 aaKnown RBP17.25■□□□□ 0.35
CYB561A3-216ENST00000540755 FSD1Q9BTV5 496 aa17.25■□□□□ 0.35
CYB561A3-216ENST00000540755 DIAPH3Q9NSV4 1193 aa17.25■□□□□ 0.35
CYB561A3-216ENST00000540755 MYH7P12883 1935 aa17.25■□□□□ 0.35
CYB561A3-216ENST00000540755 TOMM70O94826 608 aa17.24■□□□□ 0.35
CYB561A3-216ENST00000540755 UBE4AQ14139 1066 aa17.24■□□□□ 0.35
CYB561A3-216ENST00000540755 TTLL6Q8N841 843 aa17.24■□□□□ 0.35
CYB561A3-216ENST00000540755 RPGRQ92834 1020 aaKnown RBP17.24■□□□□ 0.35
CYB561A3-216ENST00000540755 DDRGK1Q96HY6 314 aa17.24■□□□□ 0.35
CYB561A3-216ENST00000540755 RBM17Q96I25 401 aaKnown RBP17.24■□□□□ 0.35
CYB561A3-216ENST00000540755 BRIP1Q9BX63 1249 aa17.24■□□□□ 0.35
CYB561A3-216ENST00000540755 USP26Q9BXU7 913 aa17.24■□□□□ 0.35
CYB561A3-216ENST00000540755 ANKRD2Q9GZV1 360 aa17.24■□□□□ 0.35
CYB561A3-216ENST00000540755 PAG1Q9NWQ8 432 aa17.24■□□□□ 0.35
CYB561A3-216ENST00000540755 NFKBIEO00221 500 aa17.24■□□□□ 0.35
CYB561A3-216ENST00000540755 SGSM2O43147 1006 aa17.24■□□□□ 0.35
CYB561A3-216ENST00000540755 UQCRFS1P1P0C7P4 283 aa17.24■□□□□ 0.35
CYB561A3-216ENST00000540755 ARID4AP29374 1257 aaPredicted RBP17.24■□□□□ 0.35
CYB561A3-216ENST00000540755 HOXA10P31260 410 aaPredicted RBP17.24■□□□□ 0.35
CYB561A3-216ENST00000540755 KBTBD3Q8NAB2 608 aa17.24■□□□□ 0.35
CYB561A3-216ENST00000540755 RAD50Q92878 1312 aa17.23■□□□□ 0.35
CYB561A3-216ENST00000540755 LRRC37AA6NMS7 1700 aa17.23■□□□□ 0.35
CYB561A3-216ENST00000540755 H0YIN7 160 aa17.23■□□□□ 0.35
CYB561A3-216ENST00000540755 CCDC102BQ68D86 513 aa17.23■□□□□ 0.35
CYB561A3-216ENST00000540755 EDC3Q96F86 508 aaKnown RBP17.23■□□□□ 0.35
CYB561A3-216ENST00000540755 CWC27Q6UX04 472 aaKnown RBP17.22■□□□□ 0.35
CYB561A3-216ENST00000540755 IPO9Q96P70 1041 aaKnown RBP17.22■□□□□ 0.35
CYB561A3-216ENST00000540755 CRAMP1Q96RY5 1269 aa17.22■□□□□ 0.35
CYB561A3-216ENST00000540755 SNRKQ9NRH2 765 aa17.22■□□□□ 0.35
CYB561A3-216ENST00000540755 NDUFB9Q9Y6M9 179 aa17.22■□□□□ 0.35
CYB561A3-216ENST00000540755 ZC3H4Q9UPT8 1303 aaKnown RBP17.22■□□□□ 0.35
CYB561A3-216ENST00000540755 FER1L6Q2WGJ9 1857 aa17.22■□□□□ 0.35
CYB561A3-216ENST00000540755 DOCK2Q92608 1830 aa17.21■□□□□ 0.35
CYB561A3-216ENST00000540755 CCDC88AQ3V6T2 1871 aa17.21■□□□□ 0.35
CYB561A3-216ENST00000540755 GOLIM4O00461 696 aa17.21■□□□□ 0.35
CYB561A3-216ENST00000540755 LMNB1P20700 586 aa17.21■□□□□ 0.35
CYB561A3-216ENST00000540755 PHKA1P46020 1223 aa17.21■□□□□ 0.35
CYB561A3-216ENST00000540755 IL25Q9H293 177 aa17.21■□□□□ 0.35
CYB561A3-216ENST00000540755 SNAP23O00161 211 aa17.2■□□□□ 0.34
CYB561A3-216ENST00000540755 PDE6BP35913 854 aa17.2■□□□□ 0.34
CYB561A3-216ENST00000540755 MCAMP43121 646 aa17.2■□□□□ 0.34
CYB561A3-216ENST00000540755 SCARF1Q14162 830 aa17.2■□□□□ 0.34
CYB561A3-216ENST00000540755 RBM46Q8TBY0 533 aaKnown RBP17.2■□□□□ 0.34
CYB561A3-216ENST00000540755 WDR90Q96KV7 1748 aa17.2■□□□□ 0.34
CYB561A3-216ENST00000540755 SLX4Q8IY92 1834 aa17.2■□□□□ 0.34
CYB561A3-216ENST00000540755 CACNA1SQ13698 1873 aa17.2■□□□□ 0.34
CYB561A3-216ENST00000540755 MYH13Q9UKX3 1938 aa17.2■□□□□ 0.34
CYB561A3-216ENST00000540755 BBOX1O75936 387 aa17.19■□□□□ 0.34
CYB561A3-216ENST00000540755 FKBP4Q02790 459 aaKnown RBP eCLIP17.19■□□□□ 0.34
CYB561A3-216ENST00000540755 NMIQ13287 307 aaPredicted RBP17.19■□□□□ 0.34
CYB561A3-216ENST00000540755 TMC4Q7Z404 712 aa17.19■□□□□ 0.34
CYB561A3-216ENST00000540755 ANO2Q9NQ90 1003 aa17.19■□□□□ 0.34
CYB561A3-216ENST00000540755 MYO5AQ9Y4I1 1855 aaKnown RBP17.19■□□□□ 0.34
CYB561A3-216ENST00000540755 MED23Q9ULK4 1368 aa17.19■□□□□ 0.34
CYB561A3-216ENST00000540755 ZNF804BA4D1E1 1349 aa17.18■□□□□ 0.34
CYB561A3-216ENST00000540755 ZAP70P43403 619 aa17.18■□□□□ 0.34
CYB561A3-216ENST00000540755 TTF1Q15361 905 aaPredicted RBP17.18■□□□□ 0.34
CYB561A3-216ENST00000540755 LRRFIP1Q32MZ4 808 aaKnown RBP17.18■□□□□ 0.34
CYB561A3-216ENST00000540755 DICER1Q9UPY3 1922 aaKnown RBP17.18■□□□□ 0.34
CYB561A3-216ENST00000540755 SRGNP10124 158 aa17.18■□□□□ 0.34
CYB561A3-216ENST00000540755 NPR1P16066 1061 aa17.18■□□□□ 0.34
CYB561A3-216ENST00000540755 APLP1P51693 650 aa17.18■□□□□ 0.34
CYB561A3-216ENST00000540755 ZNF622Q969S3 477 aaKnown RBP eCLIP17.18■□□□□ 0.34
CYB561A3-216ENST00000540755 FAM227BQ96M60 508 aa17.18■□□□□ 0.34
CYB561A3-216ENST00000540755 LSG1Q9H089 658 aaKnown RBP17.18■□□□□ 0.34
CYB561A3-216ENST00000540755 ANTXR1Q9H6X2 564 aa17.18■□□□□ 0.34
CYB561A3-216ENST00000540755 LEMD3Q9Y2U8 911 aa17.18■□□□□ 0.34
CYB561A3-216ENST00000540755 LTBP1Q14766 1721 aa17.17■□□□□ 0.34
CYB561A3-216ENST00000540755 XDHP47989 1333 aa17.17■□□□□ 0.34
CYB561A3-216ENST00000540755 A0A0D9SFI3 127 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms