RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ELP1O95163 1332 aa16.58■□□□□ 0.24
UBE3B-210ENST00000539599 ZAP70P43403 619 aa16.58■□□□□ 0.24
UBE3B-210ENST00000539599 GORABQ5T7V8 394 aa16.58■□□□□ 0.24
UBE3B-210ENST00000539599 TJP1Q07157 1748 aa16.58■□□□□ 0.24
UBE3B-210ENST00000539599 WDR17Q8IZU2 1322 aa16.58■□□□□ 0.24
UBE3B-210ENST00000539599 PCDH11XQ9BZA7 1347 aa16.58■□□□□ 0.24
UBE3B-210ENST00000539599 PCDH11YQ9BZA8 1340 aa16.58■□□□□ 0.24
UBE3B-210ENST00000539599 ILDR1Q86SU0 546 aaPredicted RBP16.57■□□□□ 0.24
UBE3B-210ENST00000539599 XAGE2Q96GT9 111 aa16.57■□□□□ 0.24
UBE3B-210ENST00000539599 PUS7LQ9H0K6 701 aaKnown RBP16.57■□□□□ 0.24
UBE3B-210ENST00000539599 RNF113AO15541 343 aaKnown RBP16.57■□□□□ 0.24
UBE3B-210ENST00000539599 PFKFB2O60825 505 aa16.57■□□□□ 0.24
UBE3B-210ENST00000539599 HLFQ16534 295 aa16.57■□□□□ 0.24
UBE3B-210ENST00000539599 SASS6Q6UVJ0 657 aa16.57■□□□□ 0.24
UBE3B-210ENST00000539599 C11orf57Q6ZUT1 292 aaPredicted RBP16.57■□□□□ 0.24
UBE3B-210ENST00000539599 CLSTN2Q9H4D0 955 aa16.57■□□□□ 0.24
UBE3B-210ENST00000539599 PKD1L3Q7Z443 1732 aa16.57■□□□□ 0.24
UBE3B-210ENST00000539599 EXOSC10Q01780 885 aaKnown RBP16.56■□□□□ 0.24
UBE3B-210ENST00000539599 SMARCC2Q8TAQ2 1214 aa16.56■□□□□ 0.24
UBE3B-210ENST00000539599 LMTK3Q96Q04 1460 aa16.56■□□□□ 0.24
UBE3B-210ENST00000539599 SNAP23O00161 211 aa16.56■□□□□ 0.24
UBE3B-210ENST00000539599 RXRAP19793 462 aa16.56■□□□□ 0.24
UBE3B-210ENST00000539599 PDIA3P30101 505 aaKnown RBP16.56■□□□□ 0.24
UBE3B-210ENST00000539599 CCDC57Q2TAC2 916 aa16.56■□□□□ 0.24
UBE3B-210ENST00000539599 TTC39AQ5SRH9 613 aa16.56■□□□□ 0.24
UBE3B-210ENST00000539599 KCPQ6ZWJ8 1503 aa16.56■□□□□ 0.24
UBE3B-210ENST00000539599 FDPSP14324 419 aaKnown RBP16.55■□□□□ 0.24
UBE3B-210ENST00000539599 CCDC186Q7Z3E2 898 aa16.55■□□□□ 0.24
UBE3B-210ENST00000539599 DRC7Q8IY82 874 aa16.55■□□□□ 0.24
UBE3B-210ENST00000539599 CEP126Q9P2H0 1117 aa16.55■□□□□ 0.24
UBE3B-210ENST00000539599 POLR3DP05423 398 aaPredicted RBP16.55■□□□□ 0.24
UBE3B-210ENST00000539599 ARID5BQ14865 1188 aa16.55■□□□□ 0.24
UBE3B-210ENST00000539599 CCAR1Q8IX12 1150 aaKnown RBP16.55■□□□□ 0.24
UBE3B-210ENST00000539599 CCDC191Q8NCU4 936 aa16.55■□□□□ 0.24
UBE3B-210ENST00000539599 IL2RBP14784 551 aa16.55■□□□□ 0.24
UBE3B-210ENST00000539599 TAF7LQ5H9L4 462 aa16.55■□□□□ 0.24
UBE3B-210ENST00000539599 TRIM5Q9C035 493 aa16.55■□□□□ 0.24
UBE3B-210ENST00000539599 INCENPQ9NQS7 918 aa16.55■□□□□ 0.24
UBE3B-210ENST00000539599 HELLSQ9NRZ9 838 aa16.55■□□□□ 0.24
UBE3B-210ENST00000539599 ZNF165P49910 485 aa16.54■□□□□ 0.24
UBE3B-210ENST00000539599 VSIG10Q8N0Z9 540 aa16.54■□□□□ 0.24
UBE3B-210ENST00000539599 DSCC1Q9BVC3 393 aa16.54■□□□□ 0.24
UBE3B-210ENST00000539599 FGAP02671 866 aa16.53■□□□□ 0.24
UBE3B-210ENST00000539599 EVA1CP58658 441 aa16.53■□□□□ 0.24
UBE3B-210ENST00000539599 HELBQ8NG08 1087 aaPredicted RBP16.53■□□□□ 0.24
UBE3B-210ENST00000539599 GREM2Q9H772 168 aa16.53■□□□□ 0.24
UBE3B-210ENST00000539599 NUP188Q5SRE5 1749 aa16.53■□□□□ 0.24
UBE3B-210ENST00000539599 A0A0G2JS52 829 aa16.53■□□□□ 0.24
UBE3B-210ENST00000539599 CCDC144BQ3MJ40 725 aa16.53■□□□□ 0.24
UBE3B-210ENST00000539599 CCDC144CPQ8IYA2 1237 aa16.53■□□□□ 0.24
UBE3B-210ENST00000539599 KIAA1524Q8TCG1 905 aa16.53■□□□□ 0.24
UBE3B-210ENST00000539599 PIGBQ92521 554 aa16.53■□□□□ 0.24
UBE3B-210ENST00000539599 AIFM3Q96NN9 605 aa16.53■□□□□ 0.24
UBE3B-210ENST00000539599 LAMB4A4D0S4 1761 aa16.52■□□□□ 0.24
UBE3B-210ENST00000539599 SYTL4Q96C24 671 aaPredicted RBP16.52■□□□□ 0.24
UBE3B-210ENST00000539599 DDX19AQ9NUU7 478 aaKnown RBP16.52■□□□□ 0.24
UBE3B-210ENST00000539599 COL5A2P05997 1499 aaPredicted RBP16.52■□□□□ 0.24
UBE3B-210ENST00000539599 UBE2Q2LH0YL09 131 aa16.52■□□□□ 0.23
UBE3B-210ENST00000539599 ME1P48163 572 aa16.52■□□□□ 0.23
UBE3B-210ENST00000539599 TCIRG1Q13488 830 aa16.52■□□□□ 0.23
UBE3B-210ENST00000539599 STK11IPQ8N1F8 1099 aa16.52■□□□□ 0.23
UBE3B-210ENST00000539599 ISCA1Q9BUE6 129 aa16.52■□□□□ 0.23
UBE3B-210ENST00000539599 SENP2Q9HC62 589 aa16.52■□□□□ 0.23
UBE3B-210ENST00000539599 TMOD3Q9NYL9 352 aa16.52■□□□□ 0.23
UBE3B-210ENST00000539599 CPDO75976 1380 aa16.51■□□□□ 0.23
UBE3B-210ENST00000539599 CARMIL3Q8ND23 1372 aa16.51■□□□□ 0.23
UBE3B-210ENST00000539599 A0A1B0GVL5 298 aa16.51■□□□□ 0.23
UBE3B-210ENST00000539599 ERVV-2B6SEH9 535 aa16.51■□□□□ 0.23
UBE3B-210ENST00000539599 MCAMP43121 646 aa16.51■□□□□ 0.23
UBE3B-210ENST00000539599 ANTXR2P58335 489 aa16.51■□□□□ 0.23
UBE3B-210ENST00000539599 SNW1Q13573 536 aaKnown RBP16.51■□□□□ 0.23
UBE3B-210ENST00000539599 KLF18A0A0U1RQI7 1052 aa16.5■□□□□ 0.23
UBE3B-210ENST00000539599 CCDC158Q5M9N0 1113 aa16.5■□□□□ 0.23
UBE3B-210ENST00000539599 CLIC4Q9Y696 253 aa16.5■□□□□ 0.23
UBE3B-210ENST00000539599 RFX7Q2KHR2 1363 aa16.5■□□□□ 0.23
UBE3B-210ENST00000539599 SALL1Q9NSC2 1324 aa16.5■□□□□ 0.23
UBE3B-210ENST00000539599 PRC1O43663 620 aa16.5■□□□□ 0.23
UBE3B-210ENST00000539599 ZNF75DP51815 510 aa16.5■□□□□ 0.23
UBE3B-210ENST00000539599 RBM43Q6ZSC3 357 aaKnown RBP16.5■□□□□ 0.23
UBE3B-210ENST00000539599 FSIP1Q8NA03 581 aa16.5■□□□□ 0.23
UBE3B-210ENST00000539599 SLC4A9Q96Q91 983 aa16.5■□□□□ 0.23
UBE3B-210ENST00000539599 NWD2Q9ULI1 1742 aa16.5■□□□□ 0.23
UBE3B-210ENST00000539599 GOLGA8BA8MQT2 603 aa16.49■□□□□ 0.23
UBE3B-210ENST00000539599 GPAA1O43292 621 aa16.49■□□□□ 0.23
UBE3B-210ENST00000539599 METTL24Q5JXM2 366 aa16.49■□□□□ 0.23
UBE3B-210ENST00000539599 ZNF710Q8N1W2 664 aa16.49■□□□□ 0.23
UBE3B-210ENST00000539599 TBC1D2BQ9UPU7 963 aa16.49■□□□□ 0.23
UBE3B-210ENST00000539599 KIF28PB7ZC32 967 aa16.49■□□□□ 0.23
UBE3B-210ENST00000539599 ITGA6P23229 1130 aa16.49■□□□□ 0.23
UBE3B-210ENST00000539599 TERF1P54274 439 aa16.49■□□□□ 0.23
UBE3B-210ENST00000539599 IFIT5Q13325 482 aaKnown RBP16.49■□□□□ 0.23
UBE3B-210ENST00000539599 ISM2Q6H9L7 571 aa16.49■□□□□ 0.23
UBE3B-210ENST00000539599 AGXT2Q9BYV1 514 aa16.49■□□□□ 0.23
UBE3B-210ENST00000539599 PDCL3Q9H2J4 239 aa16.49■□□□□ 0.23
UBE3B-210ENST00000539599 ZSCAN16Q9H4T2 348 aaPredicted RBP16.49■□□□□ 0.23
UBE3B-210ENST00000539599 GPR108Q9NPR9 543 aa16.49■□□□□ 0.23
UBE3B-210ENST00000539599 CFAP45Q9UL16 551 aa16.49■□□□□ 0.23
UBE3B-210ENST00000539599 LDHAL6AQ6ZMR3 332 aa16.49■□□□□ 0.23
UBE3B-210ENST00000539599 C16orf45Q96MC5 204 aaPredicted RBP16.49■□□□□ 0.23
UBE3B-210ENST00000539599 MYL10Q9BUA6 226 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms