RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 RFX7Q2KHR2 1363 aa24.28■■□□□ 1.48
PACSIN3-211ENST00000539589 SNAP23O00161 211 aa24.28■■□□□ 1.48
PACSIN3-211ENST00000539589 FGFR2P21802 821 aa24.28■■□□□ 1.48
PACSIN3-211ENST00000539589 IGHMBP2P38935 993 aaKnown RBP24.28■■□□□ 1.48
PACSIN3-211ENST00000539589 COL23A1Q86Y22 540 aaPredicted RBP24.28■■□□□ 1.48
PACSIN3-211ENST00000539589 NLRP3Q96P20 1036 aa24.28■■□□□ 1.48
PACSIN3-211ENST00000539589 RBM8AQ9Y5S9 174 aaKnown RBP24.28■■□□□ 1.48
PACSIN3-211ENST00000539589 TAF5LO75529 589 aa24.27■■□□□ 1.48
PACSIN3-211ENST00000539589 CELF1Q92879 486 aaKnown RBP24.27■■□□□ 1.48
PACSIN3-211ENST00000539589 CASTP20810 708 aaKnown RBP24.27■■□□□ 1.48
PACSIN3-211ENST00000539589 HMGB2P26583 209 aaKnown RBP24.27■■□□□ 1.48
PACSIN3-211ENST00000539589 CDC5LQ99459 802 aaKnown RBP24.27■■□□□ 1.48
PACSIN3-211ENST00000539589 MED23Q9ULK4 1368 aa24.26■■□□□ 1.47
PACSIN3-211ENST00000539589 PRR5LQ6MZQ0 368 aa24.26■■□□□ 1.47
PACSIN3-211ENST00000539589 IFIT1P09914 478 aaKnown RBP24.25■■□□□ 1.47
PACSIN3-211ENST00000539589 AK2P54819 239 aa24.25■■□□□ 1.47
PACSIN3-211ENST00000539589 DDR1Q08345 913 aa24.25■■□□□ 1.47
PACSIN3-211ENST00000539589 CREB3L3Q68CJ9 461 aa24.25■■□□□ 1.47
PACSIN3-211ENST00000539589 DDX46Q7L014 1031 aaKnown RBP24.25■■□□□ 1.47
PACSIN3-211ENST00000539589 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.25■■□□□ 1.47
PACSIN3-211ENST00000539589 JAKMIP1Q96N16 626 aaKnown RBP24.25■■□□□ 1.47
PACSIN3-211ENST00000539589 ZDHHC9Q9Y397 364 aa24.25■■□□□ 1.47
PACSIN3-211ENST00000539589 CHGBP05060 677 aa24.25■■□□□ 1.47
PACSIN3-211ENST00000539589 SCARF1Q14162 830 aa24.25■■□□□ 1.47
PACSIN3-211ENST00000539589 RNF20Q5VTR2 975 aa24.25■■□□□ 1.47
PACSIN3-211ENST00000539589 CNBD1Q8NA66 436 aa24.25■■□□□ 1.47
PACSIN3-211ENST00000539589 ZSWIM6Q9HCJ5 1215 aa24.25■■□□□ 1.47
PACSIN3-211ENST00000539589 LIMCH1Q9UPQ0 1083 aa24.25■■□□□ 1.47
PACSIN3-211ENST00000539589 CYP46A1Q9Y6A2 500 aa24.25■■□□□ 1.47
PACSIN3-211ENST00000539589 SERPINB2P05120 415 aa24.24■■□□□ 1.47
PACSIN3-211ENST00000539589 EN1Q05925 392 aaPredicted RBP24.24■■□□□ 1.47
PACSIN3-211ENST00000539589 CHRNDQ07001 517 aa24.24■■□□□ 1.47
PACSIN3-211ENST00000539589 PUM3Q15397 648 aaKnown RBP24.24■■□□□ 1.47
PACSIN3-211ENST00000539589 EZH2Q15910 746 aaKnown RBP24.24■■□□□ 1.47
PACSIN3-211ENST00000539589 CCDC158Q5M9N0 1113 aa24.24■■□□□ 1.47
PACSIN3-211ENST00000539589 L1TD1Q5T7N2 865 aaKnown RBP24.24■■□□□ 1.47
PACSIN3-211ENST00000539589 ANKRD18AQ8IVF6 992 aa24.24■■□□□ 1.47
PACSIN3-211ENST00000539589 CAMKK2Q96RR4 588 aa24.24■■□□□ 1.47
PACSIN3-211ENST00000539589 TTC39AQ5SRH9 613 aa24.23■■□□□ 1.47
PACSIN3-211ENST00000539589 GORABQ5T7V8 394 aa24.23■■□□□ 1.47
PACSIN3-211ENST00000539589 VPS53Q5VIR6 699 aa24.23■■□□□ 1.47
PACSIN3-211ENST00000539589 GOLIM4O00461 696 aa24.23■■□□□ 1.47
PACSIN3-211ENST00000539589 TICAM2Q86XR7 235 aa24.23■■□□□ 1.47
PACSIN3-211ENST00000539589 LPIN2Q92539 896 aa24.23■■□□□ 1.47
PACSIN3-211ENST00000539589 BSDC1Q9NW68 430 aaPredicted RBP24.23■■□□□ 1.47
PACSIN3-211ENST00000539589 PAG1Q9NWQ8 432 aa24.23■■□□□ 1.47
PACSIN3-211ENST00000539589 MYO5AQ9Y4I1 1855 aaKnown RBP24.22■■□□□ 1.47
PACSIN3-211ENST00000539589 POLRMTO00411 1230 aaKnown RBP24.22■■□□□ 1.47
PACSIN3-211ENST00000539589 PSMA5P28066 241 aa24.22■■□□□ 1.47
PACSIN3-211ENST00000539589 ADCK5Q3MIX3 580 aa24.22■■□□□ 1.47
PACSIN3-211ENST00000539589 MCTP1Q6DN14 999 aa24.22■■□□□ 1.47
PACSIN3-211ENST00000539589 PDRG1Q9NUG6 133 aa24.22■■□□□ 1.47
PACSIN3-211ENST00000539589 PNPLA7Q6ZV29 1317 aa24.22■■□□□ 1.47
PACSIN3-211ENST00000539589 SLC27A2O14975 620 aa24.22■■□□□ 1.47
PACSIN3-211ENST00000539589 NPHP1O15259 732 aa24.22■■□□□ 1.47
PACSIN3-211ENST00000539589 RUFY3Q7L099 469 aa24.22■■□□□ 1.47
PACSIN3-211ENST00000539589 KBTBD3Q8NAB2 608 aa24.22■■□□□ 1.47
PACSIN3-211ENST00000539589 GOLGA6L3A6NEY3 463 aa24.21■■□□□ 1.47
PACSIN3-211ENST00000539589 BRD1O95696 1058 aa24.21■■□□□ 1.47
PACSIN3-211ENST00000539589 ZNF589Q86UQ0 364 aaPredicted RBP24.21■■□□□ 1.47
PACSIN3-211ENST00000539589 WTIPA6NIX2 430 aaPredicted RBP24.2■■□□□ 1.47
PACSIN3-211ENST00000539589 PHKA1P46020 1223 aa24.2■■□□□ 1.47
PACSIN3-211ENST00000539589 PI16Q6UXB8 463 aa24.2■■□□□ 1.47
PACSIN3-211ENST00000539589 ANO8Q9HCE9 1232 aaPredicted RBP24.2■■□□□ 1.47
PACSIN3-211ENST00000539589 HMG20BQ9P0W2 317 aa24.2■■□□□ 1.47
PACSIN3-211ENST00000539589 RPS8P62241 208 aaKnown RBP24.2■■□□□ 1.46
PACSIN3-211ENST00000539589 MINPP1Q9UNW1 487 aa24.2■■□□□ 1.46
PACSIN3-211ENST00000539589 CPA1P15085 419 aa24.19■■□□□ 1.46
PACSIN3-211ENST00000539589 MCAMP43121 646 aa24.19■■□□□ 1.46
PACSIN3-211ENST00000539589 MCMDC2Q4G0Z9 681 aa24.19■■□□□ 1.46
PACSIN3-211ENST00000539589 CCDC102BQ68D86 513 aa24.19■■□□□ 1.46
PACSIN3-211ENST00000539589 MYH7P12883 1935 aa24.19■■□□□ 1.46
PACSIN3-211ENST00000539589 FSD2A1L4K1 749 aa24.18■■□□□ 1.46
PACSIN3-211ENST00000539589 ZNF512BQ96KM6 892 aaPredicted RBP24.18■■□□□ 1.46
PACSIN3-211ENST00000539589 ZSCAN31Q96LW9 406 aaPredicted RBP24.18■■□□□ 1.46
PACSIN3-211ENST00000539589 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.18■■□□□ 1.46
PACSIN3-211ENST00000539589 ANKRD31Q8N7Z5 1873 aa24.18■■□□□ 1.46
PACSIN3-211ENST00000539589 NRXN2Q9P2S2 1712 aa24.18■■□□□ 1.46
PACSIN3-211ENST00000539589 SLC5A1P13866 664 aa24.18■■□□□ 1.46
PACSIN3-211ENST00000539589 ZAP70P43403 619 aa24.18■■□□□ 1.46
PACSIN3-211ENST00000539589 FKBP4Q02790 459 aaKnown RBP eCLIP24.18■■□□□ 1.465e-7■■□□□ 12.9
PACSIN3-211ENST00000539589 KLHL40Q2TBA0 621 aa24.18■■□□□ 1.46
PACSIN3-211ENST00000539589 SLFNL1Q499Z3 407 aa24.18■■□□□ 1.46
PACSIN3-211ENST00000539589 RPAP1Q9BWH6 1393 aaPredicted RBP24.18■■□□□ 1.46
PACSIN3-211ENST00000539589 TSGA10IPQ3SY00 556 aa24.17■■□□□ 1.46
PACSIN3-211ENST00000539589 FLAD1Q8NFF5 587 aa24.17■■□□□ 1.46
PACSIN3-211ENST00000539589 DDX49Q9Y6V7 483 aaKnown RBP24.17■■□□□ 1.46
PACSIN3-211ENST00000539589 ARID4AP29374 1257 aaPredicted RBP24.17■■□□□ 1.46
PACSIN3-211ENST00000539589 SLC51AQ86UW1 340 aa24.17■■□□□ 1.46
PACSIN3-211ENST00000539589 SH2B1Q9NRF2 756 aaPredicted RBP24.17■■□□□ 1.46
PACSIN3-211ENST00000539589 ISY1Q9ULR0 285 aaKnown RBP24.17■■□□□ 1.46
PACSIN3-211ENST00000539589 SEC62Q99442 399 aaKnown RBP24.16■■□□□ 1.46
PACSIN3-211ENST00000539589 LMBRD1Q9NUN5 540 aa24.16■■□□□ 1.46
PACSIN3-211ENST00000539589 ST5P78524 1137 aa24.15■■□□□ 1.46
PACSIN3-211ENST00000539589 NLGN1Q8N2Q7 840 aa24.15■■□□□ 1.46
PACSIN3-211ENST00000539589 KRT32Q14532 448 aa24.15■■□□□ 1.46
PACSIN3-211ENST00000539589 CRY2Q49AN0 593 aa24.15■■□□□ 1.46
PACSIN3-211ENST00000539589 LARP6Q9BRS8 491 aaKnown RBP24.15■■□□□ 1.46
PACSIN3-211ENST00000539589 HELLSQ9NRZ9 838 aa24.15■■□□□ 1.46
PACSIN3-211ENST00000539589 U3KPZ7 1027 aaPredicted RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms