RNA–Protein interactions for RNA: ENST00000539484.1

CCDC144NL-203, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-203ENST00000539484 SYNE4Q8N205 404 aa11.87□□□□□ -0.51
CCDC144NL-203ENST00000539484 TAF1DQ9H5J8 278 aaPredicted RBP11.87□□□□□ -0.51
CCDC144NL-203ENST00000539484 MKRN1Q9UHC7 482 aaKnown RBP11.87□□□□□ -0.51
CCDC144NL-203ENST00000539484 EIF6P56537 245 aaKnown RBP11.86□□□□□ -0.51
CCDC144NL-203ENST00000539484 EIF4A1P60842 406 aaKnown RBP11.86□□□□□ -0.51
CCDC144NL-203ENST00000539484 GRIPAP1Q4V328 841 aa11.86□□□□□ -0.51
CCDC144NL-203ENST00000539484 PNMA8AQ86V59 439 aaPredicted RBP11.86□□□□□ -0.51
CCDC144NL-203ENST00000539484 NUTM1Q86Y26 1132 aa11.86□□□□□ -0.51
CCDC144NL-203ENST00000539484 GPTP24298 496 aa11.85□□□□□ -0.51
CCDC144NL-203ENST00000539484 LMOD1P29536 600 aaPredicted RBP11.85□□□□□ -0.51
CCDC144NL-203ENST00000539484 EPHX2P34913 555 aa11.85□□□□□ -0.51
CCDC144NL-203ENST00000539484 OLFM4Q6UX06 510 aa11.85□□□□□ -0.51
CCDC144NL-203ENST00000539484 PPP1R42Q7Z4L9 355 aa11.85□□□□□ -0.51
CCDC144NL-203ENST00000539484 RBM17Q96I25 401 aaKnown RBP11.85□□□□□ -0.51
CCDC144NL-203ENST00000539484 ZBTB3Q9H5J0 574 aa11.85□□□□□ -0.51
CCDC144NL-203ENST00000539484 TSPYL4Q9UJ04 414 aa11.85□□□□□ -0.51
CCDC144NL-203ENST00000539484 TRPM7Q96QT4 1865 aa11.85□□□□□ -0.51
CCDC144NL-203ENST00000539484 ZNF541Q9H0D2 1346 aa11.85□□□□□ -0.51
CCDC144NL-203ENST00000539484 TMEM88BA6NKF7 163 aa11.84□□□□□ -0.51
CCDC144NL-203ENST00000539484 WFS1O76024 890 aa11.84□□□□□ -0.51
CCDC144NL-203ENST00000539484 TTLL7Q6ZT98 887 aa11.84□□□□□ -0.51
CCDC144NL-203ENST00000539484 AIDAQ96BJ3 306 aa11.84□□□□□ -0.51
CCDC144NL-203ENST00000539484 PSMD1Q99460 953 aa11.84□□□□□ -0.51
CCDC144NL-203ENST00000539484 ERBB4Q15303 1308 aa11.84□□□□□ -0.51
CCDC144NL-203ENST00000539484 RNF123Q5XPI4 1314 aa11.84□□□□□ -0.51
CCDC144NL-203ENST00000539484 ABCC12Q96J65 1359 aa11.83□□□□□ -0.52
CCDC144NL-203ENST00000539484 IBTKQ9P2D0 1353 aaPredicted RBP11.83□□□□□ -0.52
CCDC144NL-203ENST00000539484 ANKRD36CQ5JPF3 1778 aa11.83□□□□□ -0.52
CCDC144NL-203ENST00000539484 FZD9O00144 591 aa11.83□□□□□ -0.52
CCDC144NL-203ENST00000539484 EIF2S2P20042 333 aaKnown RBP11.83□□□□□ -0.52
CCDC144NL-203ENST00000539484 LMOD3Q0VAK6 560 aa11.83□□□□□ -0.52
CCDC144NL-203ENST00000539484 CRY2Q49AN0 593 aa11.83□□□□□ -0.52
CCDC144NL-203ENST00000539484 PARP10Q53GL7 1025 aa11.83□□□□□ -0.52
CCDC144NL-203ENST00000539484 GIGYF2Q6Y7W6 1299 aaKnown RBP11.83□□□□□ -0.52
CCDC144NL-203ENST00000539484 GPC2Q8N158 579 aa11.83□□□□□ -0.52
CCDC144NL-203ENST00000539484 LARGE2Q8N3Y3 721 aa11.83□□□□□ -0.52
CCDC144NL-203ENST00000539484 NLRP3Q96P20 1036 aa11.83□□□□□ -0.52
CCDC144NL-203ENST00000539484 PLEKHF1Q96S99 279 aa11.83□□□□□ -0.52
CCDC144NL-203ENST00000539484 THUMPD2Q9BTF0 503 aaKnown RBP11.83□□□□□ -0.52
CCDC144NL-203ENST00000539484 STK17AQ9UEE5 414 aa11.83□□□□□ -0.52
CCDC144NL-203ENST00000539484 GJA3Q9Y6H8 435 aa11.83□□□□□ -0.52
CCDC144NL-203ENST00000539484 CNTNAP1P78357 1384 aa11.82□□□□□ -0.52
CCDC144NL-203ENST00000539484 TCERG1O14776 1098 aaKnown RBP11.82□□□□□ -0.52
CCDC144NL-203ENST00000539484 E2F4Q16254 413 aa11.82□□□□□ -0.52
CCDC144NL-203ENST00000539484 SUSD4Q5VX71 490 aa11.82□□□□□ -0.52
CCDC144NL-203ENST00000539484 CRAMP1Q96RY5 1269 aa11.82□□□□□ -0.52
CCDC144NL-203ENST00000539484 NPDC1Q9NQX5 325 aaPredicted RBP11.82□□□□□ -0.52
CCDC144NL-203ENST00000539484 RIC1Q4ADV7 1423 aa11.82□□□□□ -0.52
CCDC144NL-203ENST00000539484 PASKQ96RG2 1323 aa11.82□□□□□ -0.52
CCDC144NL-203ENST00000539484 RIPK4P57078 832 aa11.81□□□□□ -0.52
CCDC144NL-203ENST00000539484 NIM1KQ8IY84 436 aa11.81□□□□□ -0.52
CCDC144NL-203ENST00000539484 CNTROBQ8N137 903 aa11.81□□□□□ -0.52
CCDC144NL-203ENST00000539484 UBN2Q6ZU65 1347 aa11.81□□□□□ -0.52
CCDC144NL-203ENST00000539484 LAMB2P55268 1798 aa11.8□□□□□ -0.52
CCDC144NL-203ENST00000539484 ADAMTSL1Q8N6G6 1762 aa11.8□□□□□ -0.52
CCDC144NL-203ENST00000539484 HOXA10P31260 410 aaPredicted RBP11.8□□□□□ -0.52
CCDC144NL-203ENST00000539484 HSP90AB3PQ58FF7 597 aa11.8□□□□□ -0.52
CCDC144NL-203ENST00000539484 MAP1SQ66K74 1059 aaPredicted RBP11.8□□□□□ -0.52
CCDC144NL-203ENST00000539484 ZNF34Q8IZ26 560 aa11.8□□□□□ -0.52
CCDC144NL-203ENST00000539484 UTP14AQ9BVJ6 771 aaKnown RBP11.8□□□□□ -0.52
CCDC144NL-203ENST00000539484 PPIP5K2O43314 1243 aa11.79□□□□□ -0.52
CCDC144NL-203ENST00000539484 NTSR2O95665 410 aa11.79□□□□□ -0.52
CCDC144NL-203ENST00000539484 CTCFP49711 727 aaPredicted RBP11.79□□□□□ -0.52
CCDC144NL-203ENST00000539484 RALBP1Q15311 655 aa11.79□□□□□ -0.52
CCDC144NL-203ENST00000539484 DEFB115Q30KQ5 88 aa11.79□□□□□ -0.52
CCDC144NL-203ENST00000539484 SUPT20HQ8NEM7 779 aa11.79□□□□□ -0.52
CCDC144NL-203ENST00000539484 BABAM1Q9NWV8 329 aa11.79□□□□□ -0.52
CCDC144NL-203ENST00000539484 ABT1Q9ULW3 272 aaKnown RBP11.79□□□□□ -0.52
CCDC144NL-203ENST00000539484 ARIH1Q9Y4X5 557 aaPredicted RBP11.79□□□□□ -0.52
CCDC144NL-203ENST00000539484 FOXN1O15353 648 aa11.78□□□□□ -0.52
CCDC144NL-203ENST00000539484 VEGFBP49765 207 aa11.78□□□□□ -0.52
CCDC144NL-203ENST00000539484 AIMP1Q12904 312 aaKnown RBP11.78□□□□□ -0.52
CCDC144NL-203ENST00000539484 PAXIP1Q6ZW49 1069 aaPredicted RBP11.78□□□□□ -0.52
CCDC144NL-203ENST00000539484 VPS33BQ9H267 617 aa11.78□□□□□ -0.52
CCDC144NL-203ENST00000539484 TAF1P21675 1872 aa11.78□□□□□ -0.52
CCDC144NL-203ENST00000539484 ACTN4O43707 911 aaKnown RBP11.77□□□□□ -0.53
CCDC144NL-203ENST00000539484 TMPOP42166 694 aaKnown RBP11.77□□□□□ -0.53
CCDC144NL-203ENST00000539484 FOXC1Q12948 553 aa11.77□□□□□ -0.53
CCDC144NL-203ENST00000539484 NEUROD2Q15784 382 aa11.77□□□□□ -0.53
CCDC144NL-203ENST00000539484 KMT5BQ4FZB7 885 aa11.77□□□□□ -0.53
CCDC144NL-203ENST00000539484 USP50Q70EL3 339 aaPredicted RBP11.77□□□□□ -0.53
CCDC144NL-203ENST00000539484 PRDM10Q9NQV6 1147 aa11.77□□□□□ -0.53
CCDC144NL-203ENST00000539484 BBOX1O75936 387 aa11.76□□□□□ -0.53
CCDC144NL-203ENST00000539484 ADH1BP00325 375 aa11.76□□□□□ -0.53
CCDC144NL-203ENST00000539484 ANXA1P04083 346 aa11.76□□□□□ -0.53
CCDC144NL-203ENST00000539484 EPS15P42566 896 aa11.76□□□□□ -0.53
CCDC144NL-203ENST00000539484 ECE1P42892 770 aa11.76□□□□□ -0.53
CCDC144NL-203ENST00000539484 MAP2K1Q02750 393 aaPredicted RBP11.76□□□□□ -0.53
CCDC144NL-203ENST00000539484 AOC3Q16853 763 aa11.76□□□□□ -0.53
CCDC144NL-203ENST00000539484 DPP8Q6V1X1 898 aaPredicted RBP11.76□□□□□ -0.53
CCDC144NL-203ENST00000539484 DDX46Q7L014 1031 aaKnown RBP11.76□□□□□ -0.53
CCDC144NL-203ENST00000539484 COPS6Q7L5N1 327 aa11.76□□□□□ -0.53
CCDC144NL-203ENST00000539484 BEGAINQ9BUH8 593 aa11.76□□□□□ -0.53
CCDC144NL-203ENST00000539484 DDX21Q9NR30 783 aaKnown RBP eCLIP11.76□□□□□ -0.53
CCDC144NL-203ENST00000539484 TRMT112Q9UI30 125 aaKnown RBP11.76□□□□□ -0.53
CCDC144NL-203ENST00000539484 DACH1Q9UI36 760 aa11.76□□□□□ -0.53
CCDC144NL-203ENST00000539484 ATP6V0A2Q9Y487 856 aa11.76□□□□□ -0.53
CCDC144NL-203ENST00000539484 LAS1LQ9Y4W2 734 aaKnown RBP11.76□□□□□ -0.53
CCDC144NL-203ENST00000539484 SNED1Q8TER0 1413 aa11.76□□□□□ -0.53
CCDC144NL-203ENST00000539484 POLR2AP24928 1970 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms