RNA–Protein interactions for RNA: ENST00000539029.5

PTPN6-212, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 705 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-212ENST00000539029 LDLRAD1Q5T700 205 aa12.87□□□□□ -0.35
PTPN6-212ENST00000539029 TTC5Q8N0Z6 440 aa12.87□□□□□ -0.35
PTPN6-212ENST00000539029 MIER1Q8N108 512 aa12.87□□□□□ -0.35
PTPN6-212ENST00000539029 RNF208Q9H0X6 261 aa12.87□□□□□ -0.35
PTPN6-212ENST00000539029 COL2A1P02458 1487 aaPredicted RBP12.86□□□□□ -0.35
PTPN6-212ENST00000539029 APAF1O14727 1248 aa12.86□□□□□ -0.35
PTPN6-212ENST00000539029 RGL2O15211 777 aa12.86□□□□□ -0.35
PTPN6-212ENST00000539029 PRMT2P55345 433 aa12.86□□□□□ -0.35
PTPN6-212ENST00000539029 TEFQ10587 303 aa12.86□□□□□ -0.35
PTPN6-212ENST00000539029 NCBP3Q53F19 620 aaKnown RBP12.86□□□□□ -0.35
PTPN6-212ENST00000539029 MCM10Q7L590 875 aa12.86□□□□□ -0.35
PTPN6-212ENST00000539029 C7orf61Q8IZ16 206 aa12.86□□□□□ -0.35
PTPN6-212ENST00000539029 U2AF1L4Q8WU68 220 aaKnown RBP12.86□□□□□ -0.35
PTPN6-212ENST00000539029 NYXQ9GZU5 481 aa12.86□□□□□ -0.35
PTPN6-212ENST00000539029 HEG1Q9ULI3 1381 aa12.85□□□□□ -0.35
PTPN6-212ENST00000539029 MYLIPQ8WY64 445 aa12.85□□□□□ -0.35
PTPN6-212ENST00000539029 SLC10A4Q96EP9 437 aa12.85□□□□□ -0.35
PTPN6-212ENST00000539029 LRFN3Q9BTN0 628 aa12.85□□□□□ -0.35
PTPN6-212ENST00000539029 SCAF8Q9UPN6 1271 aaKnown RBP12.85□□□□□ -0.35
PTPN6-212ENST00000539029 ZSWIM8A7E2V4 1837 aa12.85□□□□□ -0.35
PTPN6-212ENST00000539029 CACNA1GO43497 2377 aa12.84□□□□□ -0.35
PTPN6-212ENST00000539029 GNRH1P01148 92 aa12.84□□□□□ -0.35
PTPN6-212ENST00000539029 DCTN1Q14203 1278 aa12.84□□□□□ -0.35
PTPN6-212ENST00000539029 FAM9BQ8IZU0 186 aa12.84□□□□□ -0.35
PTPN6-212ENST00000539029 ADAMTS19Q8TE59 1207 aa12.84□□□□□ -0.35
PTPN6-212ENST00000539029 TRIM35Q9UPQ4 493 aa12.84□□□□□ -0.35
PTPN6-212ENST00000539029 RRP7AQ9Y3A4 280 aaKnown RBP12.84□□□□□ -0.35
PTPN6-212ENST00000539029 FOSL2P15408 326 aa12.83□□□□□ -0.36
PTPN6-212ENST00000539029 ZNF280AP59817 542 aaPredicted RBP12.83□□□□□ -0.36
PTPN6-212ENST00000539029 TAF7Q15545 349 aaPredicted RBP12.83□□□□□ -0.36
PTPN6-212ENST00000539029 NECTIN2Q92692 538 aa12.83□□□□□ -0.36
PTPN6-212ENST00000539029 WNK4Q96J92 1243 aa12.83□□□□□ -0.36
PTPN6-212ENST00000539029 UHRF1Q96T88 793 aaPredicted RBP12.83□□□□□ -0.36
PTPN6-212ENST00000539029 SEMA6BQ9H3T3 888 aa12.83□□□□□ -0.36
PTPN6-212ENST00000539029 DBNDD1Q9H9R9 158 aa12.83□□□□□ -0.36
PTPN6-212ENST00000539029 RTL9Q8NET4 1388 aa12.82□□□□□ -0.36
PTPN6-212ENST00000539029 SGPL1O95470 568 aa12.82□□□□□ -0.36
PTPN6-212ENST00000539029 SYN1P17600 705 aa12.82□□□□□ -0.36
PTPN6-212ENST00000539029 CAPN2P17655 700 aa12.82□□□□□ -0.36
PTPN6-212ENST00000539029 PRKG1Q13976 671 aa12.82□□□□□ -0.36
PTPN6-212ENST00000539029 KIF22Q14807 665 aa12.82□□□□□ -0.36
PTPN6-212ENST00000539029 NEUROD2Q15784 382 aa12.82□□□□□ -0.36
PTPN6-212ENST00000539029 CCDC27Q2M243 656 aa12.82□□□□□ -0.36
PTPN6-212ENST00000539029 SP8Q8IXZ3 490 aa12.82□□□□□ -0.36
PTPN6-212ENST00000539029 NGEFQ8N5V2 710 aa12.82□□□□□ -0.36
PTPN6-212ENST00000539029 PTPN18Q99952 460 aa12.82□□□□□ -0.36
PTPN6-212ENST00000539029 DDX60Q8IY21 1712 aaKnown RBP12.82□□□□□ -0.36
PTPN6-212ENST00000539029 BTBD11A6QL63 1104 aa12.81□□□□□ -0.36
PTPN6-212ENST00000539029 GRK4P32298 578 aa12.81□□□□□ -0.36
PTPN6-212ENST00000539029 ZNF790Q6PG37 636 aa12.81□□□□□ -0.36
PTPN6-212ENST00000539029 THUMPD2Q9BTF0 503 aaKnown RBP12.81□□□□□ -0.36
PTPN6-212ENST00000539029 ARHGAP39Q9C0H5 1083 aa12.81□□□□□ -0.36
PTPN6-212ENST00000539029 KCNQ5Q9NR82 932 aa12.81□□□□□ -0.36
PTPN6-212ENST00000539029 BABAM1Q9NWV8 329 aa12.81□□□□□ -0.36
PTPN6-212ENST00000539029 ANGEL1Q9UNK9 670 aaKnown RBP12.81□□□□□ -0.36
PTPN6-212ENST00000539029 FAM205AQ6ZU69 1335 aa12.81□□□□□ -0.36
PTPN6-212ENST00000539029 TESPA1A2RU30 521 aaPredicted RBP12.8□□□□□ -0.36
PTPN6-212ENST00000539029 VIL1P09327 827 aaKnown RBP12.8□□□□□ -0.36
PTPN6-212ENST00000539029 UBXN2AP68543 259 aa12.8□□□□□ -0.36
PTPN6-212ENST00000539029 ZFYVE28Q9HCC9 887 aa12.8□□□□□ -0.36
PTPN6-212ENST00000539029 DUOX1Q9NRD9 1551 aa12.8□□□□□ -0.36
PTPN6-212ENST00000539029 CDH23Q9H251 3354 aa12.79□□□□□ -0.36
PTPN6-212ENST00000539029 PIP4K2AP48426 406 aaPredicted RBP12.79□□□□□ -0.36
PTPN6-212ENST00000539029 LACTBP83111 547 aaPredicted RBP12.79□□□□□ -0.36
PTPN6-212ENST00000539029 FOXK2Q01167 660 aa12.79□□□□□ -0.36
PTPN6-212ENST00000539029 CALD1Q05682 793 aaKnown RBP12.79□□□□□ -0.36
PTPN6-212ENST00000539029 WASHC4Q2M389 1173 aa12.79□□□□□ -0.36
PTPN6-212ENST00000539029 ATXN2LQ8WWM7 1075 aaKnown RBP12.79□□□□□ -0.36
PTPN6-212ENST00000539029 PAWRQ96IZ0 340 aaKnown RBP12.79□□□□□ -0.36
PTPN6-212ENST00000539029 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.79□□□□□ -0.36
PTPN6-212ENST00000539029 RIPOR2Q9Y4F9 1068 aa12.79□□□□□ -0.36
PTPN6-212ENST00000539029 SCN9AQ15858 1988 aa12.79□□□□□ -0.36
PTPN6-212ENST00000539029 ABCC4O15439 1325 aa12.79□□□□□ -0.36
PTPN6-212ENST00000539029 ECE2O60344 883 aa12.78□□□□□ -0.36
PTPN6-212ENST00000539029 BBOX1O75936 387 aa12.78□□□□□ -0.36
PTPN6-212ENST00000539029 TFRCP02786 760 aaKnown RBP12.78□□□□□ -0.36
PTPN6-212ENST00000539029 TAF1CQ15572 869 aaPredicted RBP12.78□□□□□ -0.36
PTPN6-212ENST00000539029 HLFQ16534 295 aa12.78□□□□□ -0.36
PTPN6-212ENST00000539029 NECAB2Q7Z6G3 386 aa12.78□□□□□ -0.36
PTPN6-212ENST00000539029 USP38Q8NB14 1042 aa12.78□□□□□ -0.36
PTPN6-212ENST00000539029 FMNL2Q96PY5 1086 aa12.78□□□□□ -0.36
PTPN6-212ENST00000539029 ASB2Q96Q27 587 aa12.78□□□□□ -0.36
PTPN6-212ENST00000539029 MYOZ2Q9NPC6 264 aa12.78□□□□□ -0.36
PTPN6-212ENST00000539029 BIN2Q9UBW5 565 aaPredicted RBP12.78□□□□□ -0.36
PTPN6-212ENST00000539029 PKD1L2Q7Z442 2459 aa12.78□□□□□ -0.36
PTPN6-212ENST00000539029 CHL1O00533 1208 aa12.77□□□□□ -0.37
PTPN6-212ENST00000539029 KCNQ3O43525 872 aa12.77□□□□□ -0.37
PTPN6-212ENST00000539029 C3orf67Q6ZVT6 689 aa12.77□□□□□ -0.37
PTPN6-212ENST00000539029 WWC1Q8IX03 1113 aa12.77□□□□□ -0.37
PTPN6-212ENST00000539029 RAET1EQ8TD07 263 aa12.77□□□□□ -0.37
PTPN6-212ENST00000539029 CLMNQ96JQ2 1002 aa12.77□□□□□ -0.37
PTPN6-212ENST00000539029 TRIM47Q96LD4 638 aa12.77□□□□□ -0.37
PTPN6-212ENST00000539029 ZNF853P0CG23 659 aa12.76□□□□□ -0.37
PTPN6-212ENST00000539029 TMEM31Q5JXX7 168 aa12.76□□□□□ -0.37
PTPN6-212ENST00000539029 AGBL3Q8NEM8 1001 aa12.76□□□□□ -0.37
PTPN6-212ENST00000539029 UNC93B1Q9H1C4 597 aa12.76□□□□□ -0.37
PTPN6-212ENST00000539029 SRRDQ9UH36 339 aa12.76□□□□□ -0.37
PTPN6-212ENST00000539029 IBTKQ9P2D0 1353 aaPredicted RBP12.76□□□□□ -0.37
PTPN6-212ENST00000539029 EIF4A1P60842 406 aaKnown RBP12.75□□□□□ -0.37
PTPN6-212ENST00000539029 IL16Q14005 1332 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 472.4 ms