RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.69■□□□□ 0.42
ATL3-203ENST00000538786 ANKRD1Q15327 319 aa17.68■□□□□ 0.42
ATL3-203ENST00000538786 TTF1Q15361 905 aaPredicted RBP17.68■□□□□ 0.42
ATL3-203ENST00000538786 SF3B3Q15393 1217 aaKnown RBP17.68■□□□□ 0.42
ATL3-203ENST00000538786 TBC1D9BQ66K14 1250 aa17.68■□□□□ 0.42
ATL3-203ENST00000538786 PI16Q6UXB8 463 aa17.68■□□□□ 0.42
ATL3-203ENST00000538786 HELBQ8NG08 1087 aaPredicted RBP17.68■□□□□ 0.42
ATL3-203ENST00000538786 CDC5LQ99459 802 aaKnown RBP17.68■□□□□ 0.42
ATL3-203ENST00000538786 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.68■□□□□ 0.421e-8■■■■■ 47.8
ATL3-203ENST00000538786 ZPR1O75312 459 aa17.68■□□□□ 0.42
ATL3-203ENST00000538786 BRD1O95696 1058 aa17.68■□□□□ 0.42
ATL3-203ENST00000538786 CYP21A2P08686 494 aa17.68■□□□□ 0.42
ATL3-203ENST00000538786 HSPD1P10809 573 aaKnown RBP17.68■□□□□ 0.42
ATL3-203ENST00000538786 SKOR2Q2VWA4 1001 aaPredicted RBP17.68■□□□□ 0.42
ATL3-203ENST00000538786 SLC10A5Q5PT55 438 aa17.68■□□□□ 0.42
ATL3-203ENST00000538786 OSBP2Q969R2 916 aa17.68■□□□□ 0.42
ATL3-203ENST00000538786 M0R2C6 588 aa17.67■□□□□ 0.42
ATL3-203ENST00000538786 PHKA1P46020 1223 aa17.67■□□□□ 0.42
ATL3-203ENST00000538786 BICDL1Q6ZP65 573 aa17.67■□□□□ 0.42
ATL3-203ENST00000538786 SMIM5Q71RC9 77 aa17.67■□□□□ 0.42
ATL3-203ENST00000538786 APPBP2Q92624 585 aa17.67■□□□□ 0.42
ATL3-203ENST00000538786 NEK1Q96PY6 1258 aa17.67■□□□□ 0.42
ATL3-203ENST00000538786 LARP6Q9BRS8 491 aaKnown RBP17.67■□□□□ 0.42
ATL3-203ENST00000538786 BCL11BQ9C0K0 894 aaPredicted RBP17.67■□□□□ 0.42
ATL3-203ENST00000538786 NYXQ9GZU5 481 aa17.67■□□□□ 0.42
ATL3-203ENST00000538786 LARGE1O95461 756 aa17.66■□□□□ 0.42
ATL3-203ENST00000538786 ZSCAN25Q6NSZ9 544 aa17.66■□□□□ 0.42
ATL3-203ENST00000538786 SETDB2Q96T68 719 aa17.66■□□□□ 0.42
ATL3-203ENST00000538786 QTRT2Q9H974 415 aaKnown RBP17.66■□□□□ 0.42
ATL3-203ENST00000538786 SRP68Q9UHB9 627 aaKnown RBP17.66■□□□□ 0.42
ATL3-203ENST00000538786 LY75O60449 1722 aa17.66■□□□□ 0.42
ATL3-203ENST00000538786 ARAP2Q8WZ64 1704 aa17.66■□□□□ 0.42
ATL3-203ENST00000538786 GTF2E1P29083 439 aaPredicted RBP17.66■□□□□ 0.42
ATL3-203ENST00000538786 WASHC4Q2M389 1173 aa17.66■□□□□ 0.42
ATL3-203ENST00000538786 COL9A3Q14050 684 aaPredicted RBP17.65■□□□□ 0.42
ATL3-203ENST00000538786 ARHGEF1Q92888 912 aaKnown RBP17.65■□□□□ 0.42
ATL3-203ENST00000538786 TPCN1Q9ULQ1 816 aa17.65■□□□□ 0.42
ATL3-203ENST00000538786 HMGB1P09429 215 aaKnown RBP17.64■□□□□ 0.42
ATL3-203ENST00000538786 CHRNDQ07001 517 aa17.64■□□□□ 0.42
ATL3-203ENST00000538786 ME3Q16798 604 aa17.64■□□□□ 0.42
ATL3-203ENST00000538786 C3orf67Q6ZVT6 689 aa17.64■□□□□ 0.42
ATL3-203ENST00000538786 ANKRD18AQ8IVF6 992 aa17.64■□□□□ 0.42
ATL3-203ENST00000538786 TOB2Q14106 344 aaPredicted RBP17.64■□□□□ 0.41
ATL3-203ENST00000538786 SMC3Q9UQE7 1217 aa17.64■□□□□ 0.41
ATL3-203ENST00000538786 SBF2Q86WG5 1849 aa17.63■□□□□ 0.41
ATL3-203ENST00000538786 ADD2P35612 726 aa17.63■□□□□ 0.41
ATL3-203ENST00000538786 MCTP1Q6DN14 999 aa17.63■□□□□ 0.41
ATL3-203ENST00000538786 AMIGO3Q86WK7 504 aa17.63■□□□□ 0.41
ATL3-203ENST00000538786 NBPF5PQ86XG9 351 aaPredicted RBP17.63■□□□□ 0.41
ATL3-203ENST00000538786 CCDC83Q8IWF9 413 aa17.63■□□□□ 0.41
ATL3-203ENST00000538786 SPATA5Q8NB90 893 aa17.63■□□□□ 0.41
ATL3-203ENST00000538786 PIH1D3Q9NQM4 214 aaKnown RBP17.63■□□□□ 0.41
ATL3-203ENST00000538786 CTNNA3Q9UI47 895 aa17.63■□□□□ 0.41
ATL3-203ENST00000538786 WDR33Q9C0J8 1336 aaKnown RBP17.63■□□□□ 0.41
ATL3-203ENST00000538786 UBE3CQ15386 1083 aa17.62■□□□□ 0.41
ATL3-203ENST00000538786 TRAPPC3LQ5T215 181 aa17.62■□□□□ 0.41
ATL3-203ENST00000538786 SLC9C2Q5TAH2 1124 aa17.62■□□□□ 0.41
ATL3-203ENST00000538786 TPTE2Q6XPS3 522 aa17.62■□□□□ 0.41
ATL3-203ENST00000538786 TCEANC2Q96MN5 208 aa17.62■□□□□ 0.41
ATL3-203ENST00000538786 PUS7LQ9H0K6 701 aaKnown RBP17.62■□□□□ 0.41
ATL3-203ENST00000538786 BSDC1Q9NW68 430 aaPredicted RBP17.62■□□□□ 0.41
ATL3-203ENST00000538786 C4BP0C0L5 1744 aa17.62■□□□□ 0.41
ATL3-203ENST00000538786 AKAP11Q9UKA4 1901 aa17.62■□□□□ 0.41
ATL3-203ENST00000538786 SNAP23O00161 211 aa17.62■□□□□ 0.41
ATL3-203ENST00000538786 STOX1Q6ZVD7 989 aa17.62■□□□□ 0.41
ATL3-203ENST00000538786 COL24A1Q17RW2 1714 aa17.61■□□□□ 0.41
ATL3-203ENST00000538786 FOXP2O15409 715 aa17.61■□□□□ 0.41
ATL3-203ENST00000538786 IDH1O75874 414 aaKnown RBP17.61■□□□□ 0.41
ATL3-203ENST00000538786 RFC4P35249 363 aa17.61■□□□□ 0.41
ATL3-203ENST00000538786 ST3GAL1Q11201 340 aa17.61■□□□□ 0.41
ATL3-203ENST00000538786 RASGRF1Q13972 1273 aa17.61■□□□□ 0.41
ATL3-203ENST00000538786 TAF1LQ8IZX4 1826 aa17.61■□□□□ 0.41
ATL3-203ENST00000538786 FOXD4L5Q5VV16 416 aaPredicted RBP17.6■□□□□ 0.41
ATL3-203ENST00000538786 FAM196AQ6ZSG2 479 aa17.6■□□□□ 0.41
ATL3-203ENST00000538786 FOXD4L4Q8WXT5 416 aaPredicted RBP17.6■□□□□ 0.41
ATL3-203ENST00000538786 NLRP3Q96P20 1036 aa17.6■□□□□ 0.41
ATL3-203ENST00000538786 LRRC4BQ9NT99 713 aa17.6■□□□□ 0.41
ATL3-203ENST00000538786 E7EWF7 191 aa17.6■□□□□ 0.41
ATL3-203ENST00000538786 GPAA1O43292 621 aa17.6■□□□□ 0.41
ATL3-203ENST00000538786 ADRA2BP18089 450 aa17.6■□□□□ 0.41
ATL3-203ENST00000538786 DHX32Q7L7V1 743 aaKnown RBP17.6■□□□□ 0.41
ATL3-203ENST00000538786 NECAB1Q8N987 351 aa17.6■□□□□ 0.41
ATL3-203ENST00000538786 GZF1Q9H116 711 aaPredicted RBP17.6■□□□□ 0.41
ATL3-203ENST00000538786 LMBRD1Q9NUN5 540 aa17.6■□□□□ 0.41
ATL3-203ENST00000538786 COL4A1P02462 1669 aa17.6■□□□□ 0.41
ATL3-203ENST00000538786 PDE6AP16499 860 aa17.59■□□□□ 0.41
ATL3-203ENST00000538786 GJB2P29033 226 aa17.59■□□□□ 0.41
ATL3-203ENST00000538786 BCAMP50895 628 aa17.59■□□□□ 0.41
ATL3-203ENST00000538786 IMMTQ16891 758 aaKnown RBP17.59■□□□□ 0.41
ATL3-203ENST00000538786 STX6O43752 255 aa17.59■□□□□ 0.41
ATL3-203ENST00000538786 PHF14O94880 888 aa17.59■□□□□ 0.41
ATL3-203ENST00000538786 SYT1P21579 422 aa17.59■□□□□ 0.41
ATL3-203ENST00000538786 UBE4AQ14139 1066 aa17.59■□□□□ 0.41
ATL3-203ENST00000538786 KLHL40Q2TBA0 621 aa17.59■□□□□ 0.41
ATL3-203ENST00000538786 TTLL5Q6EMB2 1281 aa17.59■□□□□ 0.41
ATL3-203ENST00000538786 Q6ZUG5 572 aa17.59■□□□□ 0.41
ATL3-203ENST00000538786 KRT27Q7Z3Y8 459 aa17.59■□□□□ 0.41
ATL3-203ENST00000538786 MINPP1Q9UNW1 487 aa17.59■□□□□ 0.41
ATL3-203ENST00000538786 ZNF532Q9HCE3 1301 aa17.58■□□□□ 0.41
ATL3-203ENST00000538786 TCRBV5S4A2TA0A5A2 114 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms