RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 ONECUT3O60422 494 aaPredicted RBP16.91■□□□□ 0.3
ACTN1-205ENST00000538545 HSPD1P10809 573 aaKnown RBP16.91■□□□□ 0.3
ACTN1-205ENST00000538545 STK3Q13188 491 aa16.91■□□□□ 0.3
ACTN1-205ENST00000538545 CHST3Q7LGC8 479 aa16.91■□□□□ 0.3
ACTN1-205ENST00000538545 IGHMBP2P38935 993 aaKnown RBP16.91■□□□□ 0.3
ACTN1-205ENST00000538545 ST3GAL1Q11201 340 aa16.91■□□□□ 0.3
ACTN1-205ENST00000538545 ME3Q16798 604 aa16.91■□□□□ 0.3
ACTN1-205ENST00000538545 CLEC4GQ6UXB4 293 aa16.91■□□□□ 0.3
ACTN1-205ENST00000538545 NBPF5PQ86XG9 351 aaPredicted RBP16.91■□□□□ 0.3
ACTN1-205ENST00000538545 KCNB2Q92953 911 aa16.91■□□□□ 0.3
ACTN1-205ENST00000538545 SETDB2Q96T68 719 aa16.91■□□□□ 0.3
ACTN1-205ENST00000538545 TPCN1Q9ULQ1 816 aa16.91■□□□□ 0.3
ACTN1-205ENST00000538545 NHSQ6T4R5 1651 aa16.91■□□□□ 0.3
ACTN1-205ENST00000538545 BCORQ6W2J9 1755 aa16.9■□□□□ 0.3
ACTN1-205ENST00000538545 FGFR2P21802 821 aa16.9■□□□□ 0.3
ACTN1-205ENST00000538545 PUM3Q15397 648 aaKnown RBP16.9■□□□□ 0.3
ACTN1-205ENST00000538545 NPHP1O15259 732 aa16.9■□□□□ 0.3
ACTN1-205ENST00000538545 FOXP2O15409 715 aa16.9■□□□□ 0.3
ACTN1-205ENST00000538545 TRAK2O60296 914 aa16.9■□□□□ 0.3
ACTN1-205ENST00000538545 PPFIA3O75145 1194 aa16.9■□□□□ 0.3
ACTN1-205ENST00000538545 BAG4O95429 457 aaKnown RBP16.9■□□□□ 0.3
ACTN1-205ENST00000538545 MCTP1Q6DN14 999 aa16.9■□□□□ 0.3
ACTN1-205ENST00000538545 WWC3Q9ULE0 1092 aa16.9■□□□□ 0.3
ACTN1-205ENST00000538545 RFC4P35249 363 aa16.89■□□□□ 0.29
ACTN1-205ENST00000538545 MCM2P49736 904 aa16.89■□□□□ 0.29
ACTN1-205ENST00000538545 RASGRF1Q13972 1273 aa16.89■□□□□ 0.29
ACTN1-205ENST00000538545 HMG20BQ9P0W2 317 aa16.89■□□□□ 0.29
ACTN1-205ENST00000538545 LIMCH1Q9UPQ0 1083 aa16.89■□□□□ 0.29
ACTN1-205ENST00000538545 TPRNQ4KMQ1 711 aa16.89■□□□□ 0.29
ACTN1-205ENST00000538545 BLOC1S2Q6QNY1 142 aa16.89■□□□□ 0.29
ACTN1-205ENST00000538545 LPIN2Q92539 896 aa16.89■□□□□ 0.29
ACTN1-205ENST00000538545 AK7Q96M32 723 aa16.89■□□□□ 0.29
ACTN1-205ENST00000538545 BRWD3Q6RI45 1802 aa16.89■□□□□ 0.29
ACTN1-205ENST00000538545 RPAP1Q9BWH6 1393 aaPredicted RBP16.89■□□□□ 0.29
ACTN1-205ENST00000538545 TAF1LQ8IZX4 1826 aa16.88■□□□□ 0.29
ACTN1-205ENST00000538545 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.88■□□□□ 0.29
ACTN1-205ENST00000538545 KLRK1P26718 216 aa16.88■□□□□ 0.29
ACTN1-205ENST00000538545 GYG1P46976 350 aa16.88■□□□□ 0.29
ACTN1-205ENST00000538545 SLC9C2Q5TAH2 1124 aa16.88■□□□□ 0.29
ACTN1-205ENST00000538545 MROH5Q6ZUA9 1318 aa16.88■□□□□ 0.29
ACTN1-205ENST00000538545 CICQ96RK0 1608 aaPredicted RBP16.88■□□□□ 0.29
ACTN1-205ENST00000538545 TOB2Q14106 344 aaPredicted RBP16.88■□□□□ 0.29
ACTN1-205ENST00000538545 RC3H1Q5TC82 1133 aaKnown RBP16.88■□□□□ 0.29
ACTN1-205ENST00000538545 RNF20Q5VTR2 975 aa16.88■□□□□ 0.29
ACTN1-205ENST00000538545 KRT27Q7Z3Y8 459 aa16.88■□□□□ 0.29
ACTN1-205ENST00000538545 DENND2AQ9ULE3 1009 aa16.88■□□□□ 0.29
ACTN1-205ENST00000538545 UTRNP46939 3433 aa16.87■□□□□ 0.29
ACTN1-205ENST00000538545 CASZ1Q86V15 1759 aa16.87■□□□□ 0.29
ACTN1-205ENST00000538545 TRAPPC3LQ5T215 181 aa16.87■□□□□ 0.29
ACTN1-205ENST00000538545 CWC22Q9HCG8 908 aaKnown RBP16.87■□□□□ 0.29
ACTN1-205ENST00000538545 HELLSQ9NRZ9 838 aa16.87■□□□□ 0.29
ACTN1-205ENST00000538545 BCL11BQ9C0K0 894 aaPredicted RBP16.87■□□□□ 0.29
ACTN1-205ENST00000538545 RPS6KB1P23443 525 aa16.86■□□□□ 0.29
ACTN1-205ENST00000538545 ANKRD18AQ8IVF6 992 aa16.86■□□□□ 0.29
ACTN1-205ENST00000538545 GBP4Q96PP9 640 aa16.86■□□□□ 0.29
ACTN1-205ENST00000538545 JAG2Q9Y219 1238 aa16.86■□□□□ 0.29
ACTN1-205ENST00000538545 SLC5A1P13866 664 aa16.86■□□□□ 0.29
ACTN1-205ENST00000538545 NUCB2P80303 420 aa16.86■□□□□ 0.29
ACTN1-205ENST00000538545 NFIXQ14938 502 aa16.86■□□□□ 0.29
ACTN1-205ENST00000538545 NKX2-3Q8TAU0 364 aa16.86■□□□□ 0.29
ACTN1-205ENST00000538545 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.86■□□□□ 0.29
ACTN1-205ENST00000538545 NEK1Q96PY6 1258 aa16.86■□□□□ 0.29
ACTN1-205ENST00000538545 TM6SF1Q9BZW5 370 aa16.86■□□□□ 0.29
ACTN1-205ENST00000538545 GDPD2Q9HCC8 539 aa16.86■□□□□ 0.29
ACTN1-205ENST00000538545 TCHHQ07283 1943 aa16.85■□□□□ 0.29
ACTN1-205ENST00000538545 GPAA1O43292 621 aa16.85■□□□□ 0.29
ACTN1-205ENST00000538545 GPHNQ9NQX3 736 aaPredicted RBP16.85■□□□□ 0.29
ACTN1-205ENST00000538545 ZNF532Q9HCE3 1301 aa16.85■□□□□ 0.29
ACTN1-205ENST00000538545 PROM2Q8N271 834 aa16.85■□□□□ 0.29
ACTN1-205ENST00000538545 SPATA5Q8NB90 893 aa16.85■□□□□ 0.29
ACTN1-205ENST00000538545 U3KPZ7 1027 aaPredicted RBP16.85■□□□□ 0.29
ACTN1-205ENST00000538545 LY75O60449 1722 aa16.85■□□□□ 0.29
ACTN1-205ENST00000538545 C4BP0C0L5 1744 aa16.85■□□□□ 0.29
ACTN1-205ENST00000538545 LRP5O75197 1615 aa16.85■□□□□ 0.29
ACTN1-205ENST00000538545 MINPP1Q9UNW1 487 aa16.84■□□□□ 0.29
ACTN1-205ENST00000538545 RFX7Q2KHR2 1363 aa16.84■□□□□ 0.29
ACTN1-205ENST00000538545 FGAP02671 866 aa16.84■□□□□ 0.29
ACTN1-205ENST00000538545 ARID4AP29374 1257 aaPredicted RBP16.84■□□□□ 0.29
ACTN1-205ENST00000538545 Q6ZUG5 572 aa16.84■□□□□ 0.29
ACTN1-205ENST00000538545 STK11IPQ8N1F8 1099 aa16.84■□□□□ 0.29
ACTN1-205ENST00000538545 CDC5LQ99459 802 aaKnown RBP16.84■□□□□ 0.29
ACTN1-205ENST00000538545 MYH7P12883 1935 aa16.84■□□□□ 0.29
ACTN1-205ENST00000538545 PSMA5P28066 241 aa16.83■□□□□ 0.29
ACTN1-205ENST00000538545 ADD2P35612 726 aa16.83■□□□□ 0.29
ACTN1-205ENST00000538545 SF3B3Q15393 1217 aaKnown RBP16.83■□□□□ 0.29
ACTN1-205ENST00000538545 MAGEB6Q8N7X4 407 aa16.83■□□□□ 0.29
ACTN1-205ENST00000538545 APPBP2Q92624 585 aa16.83■□□□□ 0.29
ACTN1-205ENST00000538545 NLRP3Q96P20 1036 aa16.83■□□□□ 0.29
ACTN1-205ENST00000538545 INCENPQ9NQS7 918 aa16.83■□□□□ 0.29
ACTN1-205ENST00000538545 SCN7AQ01118 1682 aa16.83■□□□□ 0.29
ACTN1-205ENST00000538545 LAMA4Q16363 1823 aa16.83■□□□□ 0.28
ACTN1-205ENST00000538545 GJB2P29033 226 aa16.83■□□□□ 0.28
ACTN1-205ENST00000538545 BRF1Q92994 677 aa16.83■□□□□ 0.28
ACTN1-205ENST00000538545 INTS4Q96HW7 963 aaKnown RBP16.83■□□□□ 0.28
ACTN1-205ENST00000538545 TFCP2L1Q9NZI6 479 aa16.83■□□□□ 0.28
ACTN1-205ENST00000538545 LAMB2P55268 1798 aa16.83■□□□□ 0.28
ACTN1-205ENST00000538545 C4AP0C0L4 1744 aa16.83■□□□□ 0.28
ACTN1-205ENST00000538545 DDX11L8A8MPP1 907 aa16.83■□□□□ 0.28
ACTN1-205ENST00000538545 E7EWF7 191 aa16.83■□□□□ 0.28
ACTN1-205ENST00000538545 PDE6AP16499 860 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms