RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 KRT13P13646 458 aa12.78□□□□□ -0.36
LINC00346-201ENST00000538077 MRPL50Q8N5N7 158 aaKnown RBP12.78□□□□□ -0.36
LINC00346-201ENST00000538077 ABCC1P33527 1531 aa12.78□□□□□ -0.36
LINC00346-201ENST00000538077 UHRF1BP1LA0JNW5 1464 aa12.78□□□□□ -0.36
LINC00346-201ENST00000538077 HMG20BQ9P0W2 317 aa12.78□□□□□ -0.36
LINC00346-201ENST00000538077 CCNL1Q9UK58 526 aaPredicted RBP12.78□□□□□ -0.36
LINC00346-201ENST00000538077 CEP170Q5SW79 1584 aa12.78□□□□□ -0.36
LINC00346-201ENST00000538077 N4BP3O15049 544 aa12.77□□□□□ -0.36
LINC00346-201ENST00000538077 PAIP2Q9BPZ3 127 aaKnown RBP12.77□□□□□ -0.36
LINC00346-201ENST00000538077 EEF2P13639 858 aaKnown RBP12.77□□□□□ -0.36
LINC00346-201ENST00000538077 RBM25P49756 843 aaKnown RBP12.77□□□□□ -0.36
LINC00346-201ENST00000538077 SPECC1Q5M775 1068 aa12.77□□□□□ -0.36
LINC00346-201ENST00000538077 MSL1Q68DK7 614 aa12.77□□□□□ -0.36
LINC00346-201ENST00000538077 ZNF830Q96NB3 372 aaPredicted RBP12.77□□□□□ -0.36
LINC00346-201ENST00000538077 STAMBPO95630 424 aa12.77□□□□□ -0.37
LINC00346-201ENST00000538077 CNNM2Q9H8M5 875 aa12.77□□□□□ -0.37
LINC00346-201ENST00000538077 FAM13AO94988 1023 aa12.77□□□□□ -0.37
LINC00346-201ENST00000538077 HCLS1P14317 486 aaPredicted RBP12.77□□□□□ -0.37
LINC00346-201ENST00000538077 NPATQ14207 1427 aa12.77□□□□□ -0.37
LINC00346-201ENST00000538077 KIF18AQ8NI77 898 aa12.77□□□□□ -0.37
LINC00346-201ENST00000538077 CHD1O14646 1710 aa12.77□□□□□ -0.37
LINC00346-201ENST00000538077 SHTN1A0MZ66 631 aa12.76□□□□□ -0.37
LINC00346-201ENST00000538077 KRT2P35908 639 aa12.76□□□□□ -0.37
LINC00346-201ENST00000538077 NUCB1Q02818 461 aa12.76□□□□□ -0.37
LINC00346-201ENST00000538077 SSX2IPQ9Y2D8 614 aa12.76□□□□□ -0.37
LINC00346-201ENST00000538077 SMC1AQ14683 1233 aaKnown RBP12.76□□□□□ -0.37
LINC00346-201ENST00000538077 TMX3Q96JJ7 454 aa12.76□□□□□ -0.37
LINC00346-201ENST00000538077 DDX19AQ9NUU7 478 aaKnown RBP12.76□□□□□ -0.37
LINC00346-201ENST00000538077 CCDC50Q8IVM0 306 aa12.76□□□□□ -0.37
LINC00346-201ENST00000538077 TSNARE1Q96NA8 513 aa12.76□□□□□ -0.37
LINC00346-201ENST00000538077 PDIA4P13667 645 aaKnown RBP12.76□□□□□ -0.37
LINC00346-201ENST00000538077 FNBP4Q8N3X1 1017 aaPredicted RBP12.76□□□□□ -0.37
LINC00346-201ENST00000538077 FAM170AA1A519 330 aa12.76□□□□□ -0.37
LINC00346-201ENST00000538077 BACH1O14867 736 aa12.76□□□□□ -0.37
LINC00346-201ENST00000538077 IL15P40933 162 aaPredicted RBP12.76□□□□□ -0.37
LINC00346-201ENST00000538077 TAF12Q16514 161 aa12.76□□□□□ -0.37
LINC00346-201ENST00000538077 LRRC27Q9C0I9 530 aa12.76□□□□□ -0.37
LINC00346-201ENST00000538077 STK32BQ9NY57 414 aa12.76□□□□□ -0.37
LINC00346-201ENST00000538077 PCDH11XQ9BZA7 1347 aa12.76□□□□□ -0.37
LINC00346-201ENST00000538077 PCDH11YQ9BZA8 1340 aa12.76□□□□□ -0.37
LINC00346-201ENST00000538077 MAP9Q49MG5 647 aa12.75□□□□□ -0.37
LINC00346-201ENST00000538077 EAPPQ56P03 285 aaPredicted RBP12.75□□□□□ -0.37
LINC00346-201ENST00000538077 DDX39AO00148 427 aaKnown RBP12.75□□□□□ -0.37
LINC00346-201ENST00000538077 RNF113AO15541 343 aaKnown RBP12.75□□□□□ -0.37
LINC00346-201ENST00000538077 ANO6Q4KMQ2 910 aa12.75□□□□□ -0.37
LINC00346-201ENST00000538077 CCDC129Q6ZRS4 1044 aa12.75□□□□□ -0.37
LINC00346-201ENST00000538077 CNBD1Q8NA66 436 aa12.75□□□□□ -0.37
LINC00346-201ENST00000538077 FAM89AQ96GI7 184 aa12.75□□□□□ -0.37
LINC00346-201ENST00000538077 C6orf50Q9HD87 102 aa12.75□□□□□ -0.37
LINC00346-201ENST00000538077 TSPYL6Q8N831 410 aa12.75□□□□□ -0.37
LINC00346-201ENST00000538077 TAOK3Q9H2K8 898 aa12.75□□□□□ -0.37
LINC00346-201ENST00000538077 RMND1Q9NWS8 449 aa12.75□□□□□ -0.37
LINC00346-201ENST00000538077 NBPF7P0C2Y1 421 aaPredicted RBP12.75□□□□□ -0.37
LINC00346-201ENST00000538077 GSTA5Q7RTV2 222 aa12.75□□□□□ -0.37
LINC00346-201ENST00000538077 SRRTQ9BXP5 876 aaKnown RBP12.75□□□□□ -0.37
LINC00346-201ENST00000538077 ESPNB1AK53 854 aa12.75□□□□□ -0.37
LINC00346-201ENST00000538077 SORBS3O60504 671 aa12.75□□□□□ -0.37
LINC00346-201ENST00000538077 PLCH2O75038 1416 aa12.75□□□□□ -0.37
LINC00346-201ENST00000538077 KANK3Q6NY19 840 aa12.75□□□□□ -0.37
LINC00346-201ENST00000538077 MAP3K5Q99683 1374 aa12.74□□□□□ -0.37
LINC00346-201ENST00000538077 RNMTO43148 476 aaKnown RBP12.74□□□□□ -0.37
LINC00346-201ENST00000538077 ZSCAN22P10073 491 aaPredicted RBP12.74□□□□□ -0.37
LINC00346-201ENST00000538077 TARBP1Q13395 1621 aaKnown RBP12.74□□□□□ -0.37
LINC00346-201ENST00000538077 UBASH3AP57075 661 aa12.74□□□□□ -0.37
LINC00346-201ENST00000538077 GRIPAP1Q4V328 841 aa12.74□□□□□ -0.37
LINC00346-201ENST00000538077 PPP1R14CQ8TAE6 165 aa12.74□□□□□ -0.37
LINC00346-201ENST00000538077 ZNF594Q96JF6 807 aaPredicted RBP12.74□□□□□ -0.37
LINC00346-201ENST00000538077 CEP63Q96MT8 703 aa12.74□□□□□ -0.37
LINC00346-201ENST00000538077 FAM107BQ9H098 131 aa12.74□□□□□ -0.37
LINC00346-201ENST00000538077 TAF5LO75529 589 aa12.74□□□□□ -0.37
LINC00346-201ENST00000538077 HOXC9P31274 260 aa12.74□□□□□ -0.37
LINC00346-201ENST00000538077 PDE1AP54750 535 aa12.74□□□□□ -0.37
LINC00346-201ENST00000538077 STX17P56962 302 aa12.74□□□□□ -0.37
LINC00346-201ENST00000538077 NCBP1Q09161 790 aaKnown RBP12.74□□□□□ -0.37
LINC00346-201ENST00000538077 MAEAQ7L5Y9 396 aa12.74□□□□□ -0.37
LINC00346-201ENST00000538077 SNW1Q13573 536 aaKnown RBP12.74□□□□□ -0.37
LINC00346-201ENST00000538077 CTR9Q6PD62 1173 aa12.74□□□□□ -0.37
LINC00346-201ENST00000538077 FERMT1Q9BQL6 677 aa12.74□□□□□ -0.37
LINC00346-201ENST00000538077 GBP3Q9H0R5 595 aa12.74□□□□□ -0.37
LINC00346-201ENST00000538077 PICK1Q9NRD5 415 aa12.74□□□□□ -0.37
LINC00346-201ENST00000538077 ATP2C2O75185 946 aa12.74□□□□□ -0.37
LINC00346-201ENST00000538077 TCP10Q12799 353 aa12.74□□□□□ -0.37
LINC00346-201ENST00000538077 ESYT1Q9BSJ8 1104 aa12.74□□□□□ -0.37
LINC00346-201ENST00000538077 ACTN2P35609 894 aa12.73□□□□□ -0.37
LINC00346-201ENST00000538077 EYA3Q99504 573 aa12.73□□□□□ -0.37
LINC00346-201ENST00000538077 ARMT1Q9H993 441 aa12.73□□□□□ -0.37
LINC00346-201ENST00000538077 ZFYP08048 801 aaPredicted RBP12.73□□□□□ -0.37
LINC00346-201ENST00000538077 ATP8B2P98198 1209 aa12.73□□□□□ -0.37
LINC00346-201ENST00000538077 USP48Q86UV5 1035 aa12.73□□□□□ -0.37
LINC00346-201ENST00000538077 TICAM2Q86XR7 235 aa12.73□□□□□ -0.37
LINC00346-201ENST00000538077 SPAG5Q96R06 1193 aa12.73□□□□□ -0.37
LINC00346-201ENST00000538077 IKBKGQ9Y6K9 419 aa12.73□□□□□ -0.37
LINC00346-201ENST00000538077 RTL9Q8NET4 1388 aa12.73□□□□□ -0.37
LINC00346-201ENST00000538077 MBD4O95243 580 aa12.73□□□□□ -0.37
LINC00346-201ENST00000538077 ZSCAN23Q3MJ62 389 aa12.73□□□□□ -0.37
LINC00346-201ENST00000538077 AOPEPQ8N6M6 819 aa12.73□□□□□ -0.37
LINC00346-201ENST00000538077 ASXL1Q8IXJ9 1541 aa12.73□□□□□ -0.37
LINC00346-201ENST00000538077 GIGYF2Q6Y7W6 1299 aaKnown RBP12.73□□□□□ -0.37
LINC00346-201ENST00000538077 GCP02774 474 aa12.73□□□□□ -0.37
LINC00346-201ENST00000538077 PARP1P09874 1014 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms