RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 ZCCHC17Q9NP64 241 aaKnown RBP13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 CHMP3Q9Y3E7 222 aa13.26□□□□□ -0.29
SEMA4D-221ENST00000537934 SOS1Q07889 1333 aaPredicted RBP13.25□□□□□ -0.29
SEMA4D-221ENST00000537934 HEG1Q9ULI3 1381 aa13.25□□□□□ -0.29
SEMA4D-221ENST00000537934 GOLGA6L19H0YKK7 550 aa13.25□□□□□ -0.29
SEMA4D-221ENST00000537934 ZNF496Q96IT1 587 aaPredicted RBP13.25□□□□□ -0.29
SEMA4D-221ENST00000537934 IVLP07476 585 aa13.25□□□□□ -0.29
SEMA4D-221ENST00000537934 ATP2B1P20020 1258 aa13.25□□□□□ -0.29
SEMA4D-221ENST00000537934 ACTN2P35609 894 aa13.25□□□□□ -0.29
SEMA4D-221ENST00000537934 RILPL2Q969X0 211 aa13.25□□□□□ -0.29
SEMA4D-221ENST00000537934 SLIT2O94813 1529 aa13.24□□□□□ -0.29
SEMA4D-221ENST00000537934 SPATA31A1Q5TZJ5 1347 aa13.24□□□□□ -0.29
SEMA4D-221ENST00000537934 MYCNP04198 464 aaPredicted RBP13.24□□□□□ -0.29
SEMA4D-221ENST00000537934 HOXB7P09629 217 aa13.24□□□□□ -0.29
SEMA4D-221ENST00000537934 IQCB1Q15051 598 aa13.24□□□□□ -0.29
SEMA4D-221ENST00000537934 NKX1-1Q15270 411 aaPredicted RBP13.24□□□□□ -0.29
SEMA4D-221ENST00000537934 SLC4A10Q6U841 1118 aa13.24□□□□□ -0.29
SEMA4D-221ENST00000537934 PACS2Q86VP3 889 aa13.24□□□□□ -0.29
SEMA4D-221ENST00000537934 CCDC9Q9Y3X0 531 aaKnown RBP13.24□□□□□ -0.29
SEMA4D-221ENST00000537934 TBC1D8O95759 1140 aa13.24□□□□□ -0.29
SEMA4D-221ENST00000537934 HSPA1LP34931 641 aa13.24□□□□□ -0.29
SEMA4D-221ENST00000537934 GSDMDP57764 484 aa13.24□□□□□ -0.29
SEMA4D-221ENST00000537934 SNX14Q9Y5W7 946 aa13.24□□□□□ -0.29
SEMA4D-221ENST00000537934 KAT6BQ8WYB5 2073 aa13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 PSDA5PKW4 1024 aaPredicted RBP13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 SASH3O75995 380 aa13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 PROSER3Q2NL68 480 aa13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 TSGA10IPQ3SY00 556 aa13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 CCDC158Q5M9N0 1113 aa13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 TSHZ3Q63HK5 1081 aa13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 TTC5Q8N0Z6 440 aa13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 PPP1R13BQ96KQ4 1090 aa13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 SRRTQ9BXP5 876 aaKnown RBP13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 ADAM21Q9UKJ8 722 aa13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 USP16Q9Y5T5 823 aa13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 TOGARAM1Q9Y4F4 1720 aa13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 CACNA1FO60840 1977 aa13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 C5P01031 1676 aa13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 GOLGA6L4A6NEF3 574 aa13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 SEC31AO94979 1220 aaKnown RBP13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 E4F1Q66K89 784 aaPredicted RBP13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 NGLY1Q96IV0 654 aa13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 DRC1Q96MC2 740 aa13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 MEIS3Q99687 375 aa13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 DEF6Q9H4E7 631 aa13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 TOMM22Q9NS69 142 aa13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 LRP6O75581 1613 aa13.23□□□□□ -0.29
SEMA4D-221ENST00000537934 VPS37CA5D8V6 355 aaPredicted RBP13.22□□□□□ -0.29
SEMA4D-221ENST00000537934 SCAND2PQ9GZW5 306 aaPredicted RBP13.22□□□□□ -0.29
SEMA4D-221ENST00000537934 CEP83Q9Y592 693 aa13.22□□□□□ -0.29
SEMA4D-221ENST00000537934 EFCAB8A8MWE9 144 aa13.22□□□□□ -0.29
SEMA4D-221ENST00000537934 CCDC172P0C7W6 258 aa13.22□□□□□ -0.29
SEMA4D-221ENST00000537934 KCNJ6P48051 423 aa13.22□□□□□ -0.29
SEMA4D-221ENST00000537934 LMAN1P49257 510 aa13.22□□□□□ -0.29
SEMA4D-221ENST00000537934 WNK3Q9BYP7 1800 aa13.22□□□□□ -0.29
SEMA4D-221ENST00000537934 NWD2Q9ULI1 1742 aa13.21□□□□□ -0.29
SEMA4D-221ENST00000537934 ERVV-2B6SEH9 535 aa13.21□□□□□ -0.29
SEMA4D-221ENST00000537934 PRR29P0C7W0 189 aa13.21□□□□□ -0.29
SEMA4D-221ENST00000537934 CT47A1Q5JQC4 288 aaPredicted RBP13.21□□□□□ -0.29
SEMA4D-221ENST00000537934 CC2D1AQ6P1N0 951 aaPredicted RBP13.21□□□□□ -0.29
SEMA4D-221ENST00000537934 CCDC83Q8IWF9 413 aa13.21□□□□□ -0.29
SEMA4D-221ENST00000537934 ZSCAN31Q96LW9 406 aaPredicted RBP13.21□□□□□ -0.29
SEMA4D-221ENST00000537934 LARP6Q9BRS8 491 aaKnown RBP13.21□□□□□ -0.29
SEMA4D-221ENST00000537934 STAP2Q9UGK3 403 aa13.21□□□□□ -0.29
SEMA4D-221ENST00000537934 SPATA31A5Q5VU36 1347 aa13.21□□□□□ -0.29
SEMA4D-221ENST00000537934 SPATA31A7Q8IWB4 1347 aa13.21□□□□□ -0.29
SEMA4D-221ENST00000537934 EXOC5O00471 708 aa13.21□□□□□ -0.29
SEMA4D-221ENST00000537934 TADA3O75528 432 aa13.21□□□□□ -0.29
SEMA4D-221ENST00000537934 LEKR1Q6ZMV7 388 aa13.21□□□□□ -0.29
SEMA4D-221ENST00000537934 SUGP1Q8IWZ8 645 aaKnown RBP13.21□□□□□ -0.29
SEMA4D-221ENST00000537934 GPATCH11Q8N954 259 aa13.21□□□□□ -0.29
SEMA4D-221ENST00000537934 OSBPL5Q9H0X9 879 aaPredicted RBP13.21□□□□□ -0.29
SEMA4D-221ENST00000537934 HYPKQ9NX55 129 aa13.21□□□□□ -0.29
SEMA4D-221ENST00000537934 PHLPP2Q6ZVD8 1323 aa13.21□□□□□ -0.3
SEMA4D-221ENST00000537934 LARGE1O95461 756 aa13.2□□□□□ -0.3
SEMA4D-221ENST00000537934 SWT1Q5T5J6 900 aaKnown RBP13.2□□□□□ -0.3
SEMA4D-221ENST00000537934 MNS1Q8NEH6 495 aa13.2□□□□□ -0.3
SEMA4D-221ENST00000537934 PPM1EQ8WY54 764 aa13.2□□□□□ -0.3
SEMA4D-221ENST00000537934 IL25Q9H293 177 aa13.2□□□□□ -0.3
SEMA4D-221ENST00000537934 SH2B1Q9NRF2 756 aaPredicted RBP13.2□□□□□ -0.3
SEMA4D-221ENST00000537934 IMPACTQ9P2X3 320 aa13.2□□□□□ -0.3
SEMA4D-221ENST00000537934 DBF4Q9UBU7 674 aaPredicted RBP13.2□□□□□ -0.3
SEMA4D-221ENST00000537934 BCL9LQ86UU0 1499 aa13.2□□□□□ -0.3
SEMA4D-221ENST00000537934 RPS6KA5O75582 802 aa13.2□□□□□ -0.3
SEMA4D-221ENST00000537934 PIP4K2AP48426 406 aaPredicted RBP13.2□□□□□ -0.3
SEMA4D-221ENST00000537934 CCDC91Q7Z6B0 441 aa13.2□□□□□ -0.3
SEMA4D-221ENST00000537934 UNC5CLQ8IV45 518 aa13.2□□□□□ -0.3
SEMA4D-221ENST00000537934 BANK1Q8NDB2 785 aa13.2□□□□□ -0.3
SEMA4D-221ENST00000537934 LRRCC1Q9C099 1032 aa13.2□□□□□ -0.3
SEMA4D-221ENST00000537934 PTCD1O75127 700 aaKnown RBP13.19□□□□□ -0.3
SEMA4D-221ENST00000537934 NR1I2O75469 434 aa13.19□□□□□ -0.3
SEMA4D-221ENST00000537934 SPATA32Q96LK8 384 aa13.19□□□□□ -0.3
SEMA4D-221ENST00000537934 FMNL2Q96PY5 1086 aa13.19□□□□□ -0.3
SEMA4D-221ENST00000537934 GLI3P10071 1580 aa13.19□□□□□ -0.3
SEMA4D-221ENST00000537934 TNS2Q63HR2 1409 aa13.19□□□□□ -0.3
SEMA4D-221ENST00000537934 GSCP56915 257 aaPredicted RBP13.19□□□□□ -0.3
SEMA4D-221ENST00000537934 ETF1P62495 437 aaKnown RBP13.19□□□□□ -0.3
SEMA4D-221ENST00000537934 EIF3CLB5ME19 914 aaKnown RBP13.19□□□□□ -0.3
SEMA4D-221ENST00000537934 SNRPA1P09661 255 aaKnown RBP13.19□□□□□ -0.3
SEMA4D-221ENST00000537934 PDIA6Q15084 440 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms