RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-208ENST00000537607 VPS36Q86VN1 386 aa14.09□□□□□ -0.15
CIT-208ENST00000537607 SUCLG2Q96I99 432 aa14.09□□□□□ -0.15
CIT-208ENST00000537607 NEMFO60524 1076 aa14.09□□□□□ -0.15
CIT-208ENST00000537607 LIG1P18858 919 aa14.09□□□□□ -0.15
CIT-208ENST00000537607 DNAJC10Q8IXB1 793 aa14.09□□□□□ -0.15
CIT-208ENST00000537607 SAMM50Q9Y512 469 aa14.09□□□□□ -0.15
CIT-208ENST00000537607 N4BP3O15049 544 aa14.08□□□□□ -0.16
CIT-208ENST00000537607 XRCC6P12956 609 aaKnown RBP eCLIP14.08□□□□□ -0.16
CIT-208ENST00000537607 GNAT2P19087 354 aa14.08□□□□□ -0.16
CIT-208ENST00000537607 CCDC191Q8NCU4 936 aa14.08□□□□□ -0.16
CIT-208ENST00000537607 EHMT1Q9H9B1 1298 aa14.08□□□□□ -0.16
CIT-208ENST00000537607 MBD5Q9P267 1494 aa14.08□□□□□ -0.16
CIT-208ENST00000537607 SPTLC2O15270 562 aa14.08□□□□□ -0.16
CIT-208ENST00000537607 PYM1Q9BRP8 204 aaKnown RBP14.08□□□□□ -0.16
CIT-208ENST00000537607 YEATS2Q9ULM3 1422 aa14.08□□□□□ -0.16
CIT-208ENST00000537607 MBD4O95243 580 aa14.08□□□□□ -0.16
CIT-208ENST00000537607 SYT1P21579 422 aa14.08□□□□□ -0.16
CIT-208ENST00000537607 EIF4A1P60842 406 aaKnown RBP14.08□□□□□ -0.16
CIT-208ENST00000537607 FAM200AQ8TCP9 573 aa14.08□□□□□ -0.16
CIT-208ENST00000537607 INTS4Q96HW7 963 aaKnown RBP14.08□□□□□ -0.16
CIT-208ENST00000537607 TRIM47Q96LD4 638 aa14.08□□□□□ -0.16
CIT-208ENST00000537607 DNAJC25Q9H1X3 360 aa14.08□□□□□ -0.16
CIT-208ENST00000537607 KDM2BQ8NHM5 1336 aa14.08□□□□□ -0.16
CIT-208ENST00000537607 LMTK3Q96Q04 1460 aa14.08□□□□□ -0.16
CIT-208ENST00000537607 MYO1BO43795 1136 aa14.07□□□□□ -0.16
CIT-208ENST00000537607 BMP15O95972 392 aa14.07□□□□□ -0.16
CIT-208ENST00000537607 TMCO3Q6UWJ1 677 aa14.07□□□□□ -0.16
CIT-208ENST00000537607 OGFOD1Q8N543 542 aa14.07□□□□□ -0.16
CIT-208ENST00000537607 ZNF830Q96NB3 372 aaPredicted RBP14.07□□□□□ -0.16
CIT-208ENST00000537607 NDUFB9Q9Y6M9 179 aa14.07□□□□□ -0.16
CIT-208ENST00000537607 TRIM75PA6NK02 468 aa14.07□□□□□ -0.16
CIT-208ENST00000537607 PRIM1P49642 420 aaKnown RBP14.07□□□□□ -0.16
CIT-208ENST00000537607 GCKRQ14397 625 aa14.07□□□□□ -0.16
CIT-208ENST00000537607 PPP4R3AQ6IN85 833 aa14.07□□□□□ -0.16
CIT-208ENST00000537607 TAX1BP1Q86VP1 789 aa14.07□□□□□ -0.16
CIT-208ENST00000537607 ZKSCAN3Q9BRR0 538 aa14.07□□□□□ -0.16
CIT-208ENST00000537607 CASQ1P31415 396 aa14.07□□□□□ -0.16
CIT-208ENST00000537607 NAPAP54920 295 aa14.07□□□□□ -0.16
CIT-208ENST00000537607 TAF3Q5VWG9 929 aa14.07□□□□□ -0.16
CIT-208ENST00000537607 FAM227BQ96M60 508 aa14.07□□□□□ -0.16
CIT-208ENST00000537607 RIMBP2O15034 1052 aa14.06□□□□□ -0.16
CIT-208ENST00000537607 CCDC178Q5BJE1 867 aa14.06□□□□□ -0.16
CIT-208ENST00000537607 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.06□□□□□ -0.16
CIT-208ENST00000537607 SPATA31E1Q6ZUB1 1445 aa14.06□□□□□ -0.16
CIT-208ENST00000537607 CCDC66A2RUB6 948 aa14.06□□□□□ -0.16
CIT-208ENST00000537607 JAKMIP3Q5VZ66 844 aa14.06□□□□□ -0.16
CIT-208ENST00000537607 RRAGBQ5VZM2 374 aa14.06□□□□□ -0.16
CIT-208ENST00000537607 IL17REQ8NFR9 667 aa14.06□□□□□ -0.16
CIT-208ENST00000537607 KCNQ3O43525 872 aa14.06□□□□□ -0.16
CIT-208ENST00000537607 USO1O60763 962 aaKnown RBP14.06□□□□□ -0.16
CIT-208ENST00000537607 POTEJP0CG39 1038 aa14.06□□□□□ -0.16
CIT-208ENST00000537607 UBASH3AP57075 661 aa14.06□□□□□ -0.16
CIT-208ENST00000537607 LDHBP07195 334 aaKnown RBP14.06□□□□□ -0.16
CIT-208ENST00000537607 STAT6P42226 847 aa14.05□□□□□ -0.16
CIT-208ENST00000537607 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.05□□□□□ -0.16
CIT-208ENST00000537607 SLAIN2Q9P270 581 aa14.05□□□□□ -0.16
CIT-208ENST00000537607 BLMP54132 1417 aaPredicted RBP14.05□□□□□ -0.16
CIT-208ENST00000537607 XAGE2Q96GT9 111 aa14.05□□□□□ -0.16
CIT-208ENST00000537607 CRACR2AQ9BSW2 395 aa14.05□□□□□ -0.16
CIT-208ENST00000537607 EXOC1Q9NV70 894 aa14.05□□□□□ -0.16
CIT-208ENST00000537607 SGSM2O43147 1006 aa14.05□□□□□ -0.16
CIT-208ENST00000537607 USP8P40818 1118 aa14.05□□□□□ -0.16
CIT-208ENST00000537607 CCDC186Q7Z3E2 898 aa14.05□□□□□ -0.16
CIT-208ENST00000537607 AOPEPQ8N6M6 819 aa14.05□□□□□ -0.16
CIT-208ENST00000537607 DHX58Q96C10 678 aa14.05□□□□□ -0.16
CIT-208ENST00000537607 ANKRD2Q9GZV1 360 aa14.05□□□□□ -0.16
CIT-208ENST00000537607 HELLSQ9NRZ9 838 aa14.05□□□□□ -0.16
CIT-208ENST00000537607 NEO1Q92859 1461 aa14.05□□□□□ -0.16
CIT-208ENST00000537607 DTNBO60941 627 aa14.04□□□□□ -0.16
CIT-208ENST00000537607 SEPT7Q16181 437 aaKnown RBP14.04□□□□□ -0.16
CIT-208ENST00000537607 LMOD1P29536 600 aaPredicted RBP14.04□□□□□ -0.16
CIT-208ENST00000537607 PARP10Q53GL7 1025 aa14.04□□□□□ -0.16
CIT-208ENST00000537607 TRAPPC3LQ5T215 181 aa14.04□□□□□ -0.16
CIT-208ENST00000537607 B4E1Z4 1266 aa14.04□□□□□ -0.16
CIT-208ENST00000537607 SYCP3Q8IZU3 236 aa14.04□□□□□ -0.16
CIT-208ENST00000537607 CCNL1Q9UK58 526 aaPredicted RBP14.04□□□□□ -0.16
CIT-208ENST00000537607 RNF123Q5XPI4 1314 aa14.03□□□□□ -0.16
CIT-208ENST00000537607 CALM1P0DP23 149 aa14.03□□□□□ -0.16
CIT-208ENST00000537607 CALM2P0DP24 149 aa14.03□□□□□ -0.16
CIT-208ENST00000537607 CALM3P0DP25 149 aa14.03□□□□□ -0.16
CIT-208ENST00000537607 PAFAH1B1P43034 410 aa14.03□□□□□ -0.16
CIT-208ENST00000537607 CETN1Q12798 172 aa14.03□□□□□ -0.16
CIT-208ENST00000537607 SNW1Q13573 536 aaKnown RBP14.03□□□□□ -0.16
CIT-208ENST00000537607 SLC27A2O14975 620 aa14.03□□□□□ -0.16
CIT-208ENST00000537607 PDE8AO60658 829 aa14.03□□□□□ -0.16
CIT-208ENST00000537607 TAF5LO75529 589 aa14.03□□□□□ -0.16
CIT-208ENST00000537607 CETN2P41208 172 aa14.03□□□□□ -0.16
CIT-208ENST00000537607 GBP3Q9H0R5 595 aa14.03□□□□□ -0.16
CIT-208ENST00000537607 HDAC9Q9UKV0 1011 aa14.03□□□□□ -0.16
CIT-208ENST00000537607 TYRO3Q06418 890 aa14.03□□□□□ -0.16
CIT-208ENST00000537607 FAM114A1Q8IWE2 563 aa14.03□□□□□ -0.16
CIT-208ENST00000537607 CCDC24Q8N4L8 307 aa14.03□□□□□ -0.16
CIT-208ENST00000537607 RMND1Q9NWS8 449 aa14.03□□□□□ -0.16
CIT-208ENST00000537607 RTL1A6NKG5 1358 aa14.03□□□□□ -0.16
CIT-208ENST00000537607 TBCAO75347 108 aaKnown RBP14.03□□□□□ -0.16
CIT-208ENST00000537607 PLCG2P16885 1265 aa14.03□□□□□ -0.16
CIT-208ENST00000537607 TRIM21P19474 475 aaKnown RBP14.03□□□□□ -0.16
CIT-208ENST00000537607 PUM3Q15397 648 aaKnown RBP14.03□□□□□ -0.16
CIT-208ENST00000537607 LUZP1Q86V48 1076 aa14.03□□□□□ -0.16
CIT-208ENST00000537607 CNBD1Q8NA66 436 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms