RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 BSDC1Q9NW68 430 aaPredicted RBP12.58□□□□□ -0.4
CLSTN3-207ENST00000537408 NEBLO76041 1014 aa12.58□□□□□ -0.4
CLSTN3-207ENST00000537408 TBC1D8O95759 1140 aa12.58□□□□□ -0.4
CLSTN3-207ENST00000537408 KRT85P78386 507 aa12.58□□□□□ -0.4
CLSTN3-207ENST00000537408 CCDC144BQ3MJ40 725 aa12.58□□□□□ -0.4
CLSTN3-207ENST00000537408 NBPF6Q5VWK0 638 aa12.58□□□□□ -0.4
CLSTN3-207ENST00000537408 NBPF5PQ86XG9 351 aaPredicted RBP12.58□□□□□ -0.4
CLSTN3-207ENST00000537408 CCDC144CPQ8IYA2 1237 aa12.58□□□□□ -0.4
CLSTN3-207ENST00000537408 CCDC150Q8NCX0 1101 aa12.58□□□□□ -0.4
CLSTN3-207ENST00000537408 ZNF428Q96B54 188 aa12.58□□□□□ -0.4
CLSTN3-207ENST00000537408 NBPF4Q96M43 638 aa12.58□□□□□ -0.4
CLSTN3-207ENST00000537408 FBXO3Q9UK99 471 aa12.58□□□□□ -0.4
CLSTN3-207ENST00000537408 RGS12O14924 1447 aa12.58□□□□□ -0.4
CLSTN3-207ENST00000537408 ERBB3P21860 1342 aa12.58□□□□□ -0.4
CLSTN3-207ENST00000537408 RFC4P35249 363 aa12.57□□□□□ -0.4
CLSTN3-207ENST00000537408 FAM182BQ5T319 152 aa12.57□□□□□ -0.4
CLSTN3-207ENST00000537408 KCND1Q9NSA2 647 aa12.57□□□□□ -0.4
CLSTN3-207ENST00000537408 AATKQ6ZMQ8 1374 aa12.57□□□□□ -0.4
CLSTN3-207ENST00000537408 CDC42BPGQ6DT37 1551 aa12.57□□□□□ -0.4
CLSTN3-207ENST00000537408 CCDC189A1A4V9 331 aa12.57□□□□□ -0.4
CLSTN3-207ENST00000537408 GNAT3A8MTJ3 354 aa12.57□□□□□ -0.4
CLSTN3-207ENST00000537408 NEDD9Q14511 834 aa12.57□□□□□ -0.4
CLSTN3-207ENST00000537408 DNAI1Q9UI46 699 aa12.57□□□□□ -0.4
CLSTN3-207ENST00000537408 PSDA5PKW4 1024 aaPredicted RBP12.57□□□□□ -0.4
CLSTN3-207ENST00000537408 POTEDQ86YR6 584 aa12.57□□□□□ -0.4
CLSTN3-207ENST00000537408 CALR3Q96L12 384 aaKnown RBP12.57□□□□□ -0.4
CLSTN3-207ENST00000537408 ANO2Q9NQ90 1003 aa12.57□□□□□ -0.4
CLSTN3-207ENST00000537408 ZBTB7BO15156 539 aaPredicted RBP12.57□□□□□ -0.4
CLSTN3-207ENST00000537408 GNL3LQ9NVN8 582 aaKnown RBP12.57□□□□□ -0.4
CLSTN3-207ENST00000537408 NRXN1Q9ULB1 1477 aa12.56□□□□□ -0.4
CLSTN3-207ENST00000537408 ZKSCAN8Q15776 578 aaPredicted RBP12.56□□□□□ -0.4
CLSTN3-207ENST00000537408 KIF6Q6ZMV9 814 aa12.56□□□□□ -0.4
CLSTN3-207ENST00000537408 ZNF652Q9Y2D9 606 aa12.56□□□□□ -0.4
CLSTN3-207ENST00000537408 IL16Q14005 1332 aa12.56□□□□□ -0.4
CLSTN3-207ENST00000537408 PHLPP2Q6ZVD8 1323 aa12.56□□□□□ -0.4
CLSTN3-207ENST00000537408 PPFIA4O75335 1185 aa12.56□□□□□ -0.4
CLSTN3-207ENST00000537408 NBPF10Q6P3W6 841 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-207ENST00000537408 STAG1Q8WVM7 1258 aa12.56□□□□□ -0.4
CLSTN3-207ENST00000537408 SIGLEC1Q9BZZ2 1709 aa12.56□□□□□ -0.4
CLSTN3-207ENST00000537408 TMPOP42166 694 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-207ENST00000537408 VEZTQ9HBM0 779 aa12.56□□□□□ -0.4
CLSTN3-207ENST00000537408 POTEB2H3BUK9 544 aa12.55□□□□□ -0.4
CLSTN3-207ENST00000537408 IRF6O14896 467 aa12.55□□□□□ -0.4
CLSTN3-207ENST00000537408 SARM1Q6SZW1 724 aa12.55□□□□□ -0.4
CLSTN3-207ENST00000537408 PPP1R13BQ96KQ4 1090 aa12.55□□□□□ -0.4
CLSTN3-207ENST00000537408 TTC36A6NLP5 189 aa12.55□□□□□ -0.4
CLSTN3-207ENST00000537408 DDX58O95786 925 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-207ENST00000537408 CCDC93Q567U6 631 aa12.55□□□□□ -0.4
CLSTN3-207ENST00000537408 CCDC30Q5VVM6 783 aa12.55□□□□□ -0.4
CLSTN3-207ENST00000537408 HDXQ7Z353 690 aa12.55□□□□□ -0.4
CLSTN3-207ENST00000537408 DCAF5Q96JK2 942 aa12.55□□□□□ -0.4
CLSTN3-207ENST00000537408 CARD6Q9BX69 1037 aa12.55□□□□□ -0.4
CLSTN3-207ENST00000537408 DNAJC25Q9H1X3 360 aa12.55□□□□□ -0.4
CLSTN3-207ENST00000537408 TTC41PQ6P2S7 1318 aa12.55□□□□□ -0.4
CLSTN3-207ENST00000537408 HMMRO75330 724 aa12.55□□□□□ -0.4
CLSTN3-207ENST00000537408 SFPQP23246 707 aaKnown RBP eCLIP12.55□□□□□ -0.4
CLSTN3-207ENST00000537408 DNM1Q05193 864 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-207ENST00000537408 BRD3Q15059 726 aa12.55□□□□□ -0.4
CLSTN3-207ENST00000537408 RTCBQ9Y3I0 505 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-207ENST00000537408 SH3BP1Q9Y3L3 701 aa12.55□□□□□ -0.4
CLSTN3-207ENST00000537408 SPATA31A5Q5VU36 1347 aa12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 SPATA31A7Q8IWB4 1347 aa12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 VPS37CA5D8V6 355 aaPredicted RBP12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 TADA3O75528 432 aa12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 AP1ARQ63HQ0 302 aa12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 A0A087WZG4 1122 aa12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 SYT1P21579 422 aa12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 MAP9Q49MG5 647 aa12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 BARGINQ6ZT62 677 aa12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 ERCC4Q92889 916 aaPredicted RBP12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 PAIP2Q9BPZ3 127 aaKnown RBP12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 ETF1P62495 437 aaKnown RBP12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 NEXNQ0ZGT2 675 aa12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 CCDC102AQ96A19 550 aa12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 API5Q9BZZ5 524 aaKnown RBP12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 RTL1A6NKG5 1358 aa12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 LTBP4Q8N2S1 1624 aa12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 SPATA31A1Q5TZJ5 1347 aa12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 SGSM2O43147 1006 aa12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 NFE2L2Q16236 605 aa12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 BICD2Q8TD16 824 aa12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 DCTPP1Q9H773 170 aa12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 IMPACTQ9P2X3 320 aa12.54□□□□□ -0.4
CLSTN3-207ENST00000537408 BTBD11A6QL63 1104 aa12.53□□□□□ -0.4
CLSTN3-207ENST00000537408 CCZ1BP86790 482 aa12.53□□□□□ -0.4
CLSTN3-207ENST00000537408 CCZ1P86791 482 aaPredicted RBP12.53□□□□□ -0.4
CLSTN3-207ENST00000537408 ARHGAP45Q92619 1136 aa12.53□□□□□ -0.4
CLSTN3-207ENST00000537408 GOLGA1Q92805 767 aa12.53□□□□□ -0.4
CLSTN3-207ENST00000537408 UPF3BQ9BZI7 483 aaKnown RBP12.53□□□□□ -0.4
CLSTN3-207ENST00000537408 CRB1P82279 1406 aa12.53□□□□□ -0.4
CLSTN3-207ENST00000537408 SASH3O75995 380 aa12.53□□□□□ -0.4
CLSTN3-207ENST00000537408 EN1Q05925 392 aaPredicted RBP12.53□□□□□ -0.4
CLSTN3-207ENST00000537408 SCP2P22307 547 aa12.53□□□□□ -0.4
CLSTN3-207ENST00000537408 ELF1P32519 619 aa12.53□□□□□ -0.4
CLSTN3-207ENST00000537408 LONRF2Q1L5Z9 754 aa12.53□□□□□ -0.4
CLSTN3-207ENST00000537408 NUTM1Q86Y26 1132 aa12.53□□□□□ -0.4
CLSTN3-207ENST00000537408 GBP3Q9H0R5 595 aa12.53□□□□□ -0.4
CLSTN3-207ENST00000537408 DACT1Q9NYF0 836 aa12.53□□□□□ -0.4
CLSTN3-207ENST00000537408 ZBTB12Q9Y330 459 aaPredicted RBP12.53□□□□□ -0.4
CLSTN3-207ENST00000537408 HNRNPH1P31943 449 aaKnown RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms