RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 IKBKBO14920 756 aa8.06□□□□□ -1.12
CPSF7-215ENST00000536145 MAP3K9P80192 1104 aa8.06□□□□□ -1.12
CPSF7-215ENST00000536145 EXOSC10Q01780 885 aaKnown RBP8.06□□□□□ -1.12
CPSF7-215ENST00000536145 STK3Q13188 491 aa8.06□□□□□ -1.12
CPSF7-215ENST00000536145 TBX2Q13207 712 aaPredicted RBP8.06□□□□□ -1.12
CPSF7-215ENST00000536145 DPCR1Q3MIW9 517 aa8.06□□□□□ -1.12
CPSF7-215ENST00000536145 ADALQ6DHV7 355 aa8.06□□□□□ -1.12
CPSF7-215ENST00000536145 STOX1Q6ZVD7 989 aa8.06□□□□□ -1.12
CPSF7-215ENST00000536145 AACSQ86V21 672 aa8.06□□□□□ -1.12
CPSF7-215ENST00000536145 PI4KAP1Q8N8J0 262 aa8.06□□□□□ -1.12
CPSF7-215ENST00000536145 MRPS27Q92552 414 aaKnown RBP8.06□□□□□ -1.12
CPSF7-215ENST00000536145 UBXN4Q92575 508 aa8.06□□□□□ -1.12
CPSF7-215ENST00000536145 NEK1Q96PY6 1258 aa8.06□□□□□ -1.12
CPSF7-215ENST00000536145 MPHOSPH8Q99549 860 aa8.06□□□□□ -1.12
CPSF7-215ENST00000536145 CARD6Q9BX69 1037 aa8.06□□□□□ -1.12
CPSF7-215ENST00000536145 ESF1Q9H501 851 aaKnown RBP8.06□□□□□ -1.12
CPSF7-215ENST00000536145 YY1AP1Q9H869 796 aa8.06□□□□□ -1.12
CPSF7-215ENST00000536145 KIAA1468Q9P260 1216 aa8.06□□□□□ -1.12
CPSF7-215ENST00000536145 PCDHA7Q9UN72 937 aa8.06□□□□□ -1.12
CPSF7-215ENST00000536145 PA2G4Q9UQ80 394 aaKnown RBP8.06□□□□□ -1.12
CPSF7-215ENST00000536145 U3KPZ7 1027 aaPredicted RBP8.06□□□□□ -1.12
CPSF7-215ENST00000536145 LAMA4Q16363 1823 aa8.06□□□□□ -1.12
CPSF7-215ENST00000536145 ZNF609O15014 1411 aa8.05□□□□□ -1.12
CPSF7-215ENST00000536145 FAM237AA0A1B0GTK4 181 aa8.05□□□□□ -1.12
CPSF7-215ENST00000536145 H3BQF6 201 aa8.05□□□□□ -1.12
CPSF7-215ENST00000536145 POLR3GO15318 223 aaPredicted RBP8.05□□□□□ -1.12
CPSF7-215ENST00000536145 KINO60870 393 aaKnown RBP8.05□□□□□ -1.12
CPSF7-215ENST00000536145 SFPQP23246 707 aaKnown RBP eCLIP8.05□□□□□ -1.12
CPSF7-215ENST00000536145 EVCP57679 992 aa8.05□□□□□ -1.12
CPSF7-215ENST00000536145 FANCCQ00597 558 aa8.05□□□□□ -1.12
CPSF7-215ENST00000536145 SMC1AQ14683 1233 aaKnown RBP8.05□□□□□ -1.12
CPSF7-215ENST00000536145 Q6ZUG5 572 aa8.05□□□□□ -1.12
CPSF7-215ENST00000536145 GPR161Q8N6U8 529 aaKnown RBP8.05□□□□□ -1.12
CPSF7-215ENST00000536145 RGS22Q8NE09 1264 aa8.05□□□□□ -1.12
CPSF7-215ENST00000536145 GOLGA5Q8TBA6 731 aa8.05□□□□□ -1.12
CPSF7-215ENST00000536145 DPF2Q92785 391 aa8.05□□□□□ -1.12
CPSF7-215ENST00000536145 KIFC2Q96AC6 838 aa8.05□□□□□ -1.12
CPSF7-215ENST00000536145 SUCLG2Q96I99 432 aa8.05□□□□□ -1.12
CPSF7-215ENST00000536145 NAT10Q9H0A0 1025 aaKnown RBP8.05□□□□□ -1.12
CPSF7-215ENST00000536145 TLR7Q9NYK1 1049 aaKnown RBP8.05□□□□□ -1.12
CPSF7-215ENST00000536145 CHPF2Q9P2E5 772 aa8.05□□□□□ -1.12
CPSF7-215ENST00000536145 LCMT1Q9UIC8 334 aa8.05□□□□□ -1.12
CPSF7-215ENST00000536145 TUBE1Q9UJT0 475 aa8.05□□□□□ -1.12
CPSF7-215ENST00000536145 PTPDC1A2A3K4 754 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 H3BQV1 296 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 MYO1CO00159 1063 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 NPHP1O15259 732 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 MYO1BO43795 1136 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 YEATS4O95619 227 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 ATP5JP18859 108 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 HOXC9P31274 260 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 CASQ1P31415 396 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 OS9Q13438 667 aaPredicted RBP8.04□□□□□ -1.12
CPSF7-215ENST00000536145 ZSCAN26Q16670 478 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 IFFO2Q5TF58 517 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 KRBA2Q6ZNG9 492 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 SRLQ86TD4 932 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 VSTM4Q8IW00 320 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 FBXL16Q8N461 479 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 LINC00301Q8NCQ3 95 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 RABGGTAQ92696 567 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 SYTL4Q96C24 671 aaPredicted RBP8.04□□□□□ -1.12
CPSF7-215ENST00000536145 TRERF1Q96PN7 1200 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 RASSF4Q9H2L5 321 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 ZCCHC17Q9NP64 241 aaKnown RBP8.04□□□□□ -1.12
CPSF7-215ENST00000536145 HDAC5Q9UQL6 1122 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 MRFAP1Q9Y605 127 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 PLEKHG2Q9H7P9 1386 aa8.04□□□□□ -1.12
CPSF7-215ENST00000536145 LMTK3Q96Q04 1460 aa8.03□□□□□ -1.12
CPSF7-215ENST00000536145 TMEM94Q12767 1356 aa8.03□□□□□ -1.12
CPSF7-215ENST00000536145 KCNQ3O43525 872 aa8.03□□□□□ -1.12
CPSF7-215ENST00000536145 DHX16O60231 1041 aaKnown RBP8.03□□□□□ -1.12
CPSF7-215ENST00000536145 SMC2O95347 1197 aa8.03□□□□□ -1.12
CPSF7-215ENST00000536145 CYP21A2P08686 494 aa8.03□□□□□ -1.12
CPSF7-215ENST00000536145 FDPSP14324 419 aaKnown RBP8.03□□□□□ -1.12
CPSF7-215ENST00000536145 USP5P45974 858 aa8.03□□□□□ -1.12
CPSF7-215ENST00000536145 NDUFA8P51970 172 aa8.03□□□□□ -1.12
CPSF7-215ENST00000536145 BRD3Q15059 726 aa8.03□□□□□ -1.12
CPSF7-215ENST00000536145 AXDND1Q5T1B0 1012 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-215ENST00000536145 CTR9Q6PD62 1173 aa8.03□□□□□ -1.12
CPSF7-215ENST00000536145 KSR2Q6VAB6 950 aa8.03□□□□□ -1.12
CPSF7-215ENST00000536145 MNS1Q8NEH6 495 aa8.03□□□□□ -1.12
CPSF7-215ENST00000536145 HNRNPLLQ8WVV9 542 aaKnown RBP8.03□□□□□ -1.12
CPSF7-215ENST00000536145 ERCC4Q92889 916 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-215ENST00000536145 FSD1Q9BTV5 496 aa8.03□□□□□ -1.12
CPSF7-215ENST00000536145 CHMP4AQ9BY43 222 aa8.03□□□□□ -1.12
CPSF7-215ENST00000536145 PARD6BQ9BYG5 372 aa8.03□□□□□ -1.12
CPSF7-215ENST00000536145 CCDC8Q9H0W5 538 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-215ENST00000536145 EPC1Q9H2F5 836 aa8.03□□□□□ -1.12
CPSF7-215ENST00000536145 BOLA2Q9H3K6 86 aa8.03□□□□□ -1.12
CPSF7-215ENST00000536145 INTS13Q9NVM9 706 aa8.03□□□□□ -1.12
CPSF7-215ENST00000536145 RAB21Q9UL25 225 aa8.03□□□□□ -1.12
CPSF7-215ENST00000536145 DDX60Q8IY21 1712 aaKnown RBP8.03□□□□□ -1.12
CPSF7-215ENST00000536145 OVOS2A0A0G2JMS6 1433 aa8.03□□□□□ -1.12
CPSF7-215ENST00000536145 ANKARQ7Z5J8 1434 aa8.03□□□□□ -1.12
CPSF7-215ENST00000536145 CCDC151A5D8V7 595 aa8.02□□□□□ -1.13
CPSF7-215ENST00000536145 TRIM66O15016 1216 aa8.02□□□□□ -1.13
CPSF7-215ENST00000536145 URI1O94763 535 aaPredicted RBP8.02□□□□□ -1.13
CPSF7-215ENST00000536145 ACTN2P35609 894 aa8.02□□□□□ -1.13
CPSF7-215ENST00000536145 RFX5P48382 616 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms