RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 ZNF512BQ96KM6 892 aaPredicted RBP25.3■■□□□ 1.64
PDXDC1-205ENST00000535621 COL11A2P13942 1736 aaPredicted RBP25.29■■□□□ 1.64
PDXDC1-205ENST00000535621 PTH1RQ03431 593 aa25.29■■□□□ 1.64
PDXDC1-205ENST00000535621 CHRNDQ07001 517 aa25.29■■□□□ 1.64
PDXDC1-205ENST00000535621 SCARF1Q14162 830 aa25.29■■□□□ 1.64
PDXDC1-205ENST00000535621 PARP3Q9Y6F1 533 aa25.29■■□□□ 1.64
PDXDC1-205ENST00000535621 ANTXR1Q9H6X2 564 aa25.28■■□□□ 1.64
PDXDC1-205ENST00000535621 BSDC1Q9NW68 430 aaPredicted RBP25.28■■□□□ 1.64
PDXDC1-205ENST00000535621 CCDC171Q6TFL3 1326 aa25.28■■□□□ 1.64
PDXDC1-205ENST00000535621 CHGBP05060 677 aa25.27■■□□□ 1.64
PDXDC1-205ENST00000535621 RPS8P62241 208 aaKnown RBP25.27■■□□□ 1.64
PDXDC1-205ENST00000535621 FKBP4Q02790 459 aaKnown RBP eCLIP25.27■■□□□ 1.64
PDXDC1-205ENST00000535621 AKAP11Q9UKA4 1901 aa25.27■■□□□ 1.64
PDXDC1-205ENST00000535621 CRY2Q49AN0 593 aa25.27■■□□□ 1.64
PDXDC1-205ENST00000535621 SLC5A1P13866 664 aa25.26■■□□□ 1.63
PDXDC1-205ENST00000535621 CCDC102BQ68D86 513 aa25.26■■□□□ 1.63
PDXDC1-205ENST00000535621 ZNF589Q86UQ0 364 aaPredicted RBP25.26■■□□□ 1.63
PDXDC1-205ENST00000535621 MCAMP43121 646 aa25.25■■□□□ 1.63
PDXDC1-205ENST00000535621 MINPP1Q9UNW1 487 aa25.25■■□□□ 1.63
PDXDC1-205ENST00000535621 K7ELQ4 463 aaPredicted RBP25.25■■□□□ 1.63
PDXDC1-205ENST00000535621 RPGRQ92834 1020 aaKnown RBP25.25■■□□□ 1.63
PDXDC1-205ENST00000535621 MAP4K1Q92918 833 aa25.25■■□□□ 1.63
PDXDC1-205ENST00000535621 CACNA1SQ13698 1873 aa25.25■■□□□ 1.63
PDXDC1-205ENST00000535621 ST18O60284 1047 aa25.24■■□□□ 1.63
PDXDC1-205ENST00000535621 ARID4AP29374 1257 aaPredicted RBP25.24■■□□□ 1.63
PDXDC1-205ENST00000535621 ZAP70P43403 619 aa25.24■■□□□ 1.63
PDXDC1-205ENST00000535621 PHKA1P46020 1223 aa25.24■■□□□ 1.63
PDXDC1-205ENST00000535621 PI16Q6UXB8 463 aa25.24■■□□□ 1.63
PDXDC1-205ENST00000535621 SLKQ9H2G2 1235 aaPredicted RBP25.24■■□□□ 1.63
PDXDC1-205ENST00000535621 MCMDC2Q4G0Z9 681 aa25.23■■□□□ 1.63
PDXDC1-205ENST00000535621 SEC62Q99442 399 aaKnown RBP25.23■■□□□ 1.63
PDXDC1-205ENST00000535621 SNX14Q9Y5W7 946 aa25.23■■□□□ 1.63
PDXDC1-205ENST00000535621 GRAPQ13588 217 aa25.22■■□□□ 1.63
PDXDC1-205ENST00000535621 NECTIN1Q15223 517 aa25.22■■□□□ 1.63
PDXDC1-205ENST00000535621 RASEFQ8IZ41 740 aa25.22■■□□□ 1.63
PDXDC1-205ENST00000535621 SPRYD3Q8NCJ5 442 aa25.22■■□□□ 1.63
PDXDC1-205ENST00000535621 GRAPLQ8TC17 118 aaPredicted RBP25.22■■□□□ 1.63
PDXDC1-205ENST00000535621 UQCRFS1P1P0C7P4 283 aa25.22■■□□□ 1.63
PDXDC1-205ENST00000535621 NEK4P51957 841 aa25.22■■□□□ 1.63
PDXDC1-205ENST00000535621 BRIP1Q9BX63 1249 aa25.22■■□□□ 1.63
PDXDC1-205ENST00000535621 KLRG2A4D1S0 409 aaPredicted RBP25.21■■□□□ 1.63
PDXDC1-205ENST00000535621 ZMYM1Q5SVZ6 1142 aa25.21■■□□□ 1.63
PDXDC1-205ENST00000535621 KCNB2Q92953 911 aa25.21■■□□□ 1.63
PDXDC1-205ENST00000535621 HELLSQ9NRZ9 838 aa25.21■■□□□ 1.63
PDXDC1-205ENST00000535621 RBM8AQ9Y5S9 174 aaKnown RBP25.21■■□□□ 1.63
PDXDC1-205ENST00000535621 RNF113AO15541 343 aaKnown RBP25.2■■□□□ 1.63
PDXDC1-205ENST00000535621 SLFNL1Q499Z3 407 aa25.2■■□□□ 1.63
PDXDC1-205ENST00000535621 GOLGB1Q14789 3259 aaKnown RBP25.2■■□□□ 1.62
PDXDC1-205ENST00000535621 ZBTB7AO95365 584 aa25.19■■□□□ 1.62
PDXDC1-205ENST00000535621 R3HDM1Q15032 1099 aaKnown RBP25.19■■□□□ 1.62
PDXDC1-205ENST00000535621 PRPF40BQ6NWY9 871 aaKnown RBP25.19■■□□□ 1.62
PDXDC1-205ENST00000535621 MYO5AQ9Y4I1 1855 aaKnown RBP25.19■■□□□ 1.62
PDXDC1-205ENST00000535621 CYP2E1P05181 493 aaPredicted RBP25.19■■□□□ 1.62
PDXDC1-205ENST00000535621 KLRK1P26718 216 aa25.19■■□□□ 1.62
PDXDC1-205ENST00000535621 LRRFIP1Q32MZ4 808 aaKnown RBP25.19■■□□□ 1.62
PDXDC1-205ENST00000535621 CCDC129Q6ZRS4 1044 aa25.19■■□□□ 1.62
PDXDC1-205ENST00000535621 RBM17Q96I25 401 aaKnown RBP25.18■■□□□ 1.62
PDXDC1-205ENST00000535621 ZFYP08048 801 aaPredicted RBP25.17■■□□□ 1.62
PDXDC1-205ENST00000535621 SRGNP10124 158 aa25.17■■□□□ 1.62
PDXDC1-205ENST00000535621 HOXA10P31260 410 aaPredicted RBP25.17■■□□□ 1.62
PDXDC1-205ENST00000535621 UBE4AQ14139 1066 aa25.17■■□□□ 1.62
PDXDC1-205ENST00000535621 UPF3BQ9BZI7 483 aaKnown RBP25.17■■□□□ 1.62
PDXDC1-205ENST00000535621 HMG20BQ9P0W2 317 aa25.17■■□□□ 1.62
PDXDC1-205ENST00000535621 MYH7P12883 1935 aa25.17■■□□□ 1.62
PDXDC1-205ENST00000535621 KCNJ4P48050 445 aa25.17■■□□□ 1.62
PDXDC1-205ENST00000535621 BCAMP50895 628 aa25.17■■□□□ 1.62
PDXDC1-205ENST00000535621 TTF1Q15361 905 aaPredicted RBP25.17■■□□□ 1.62
PDXDC1-205ENST00000535621 CREB3L3Q68CJ9 461 aa25.17■■□□□ 1.62
PDXDC1-205ENST00000535621 IL27Q8NEV9 243 aa25.17■■□□□ 1.62
PDXDC1-205ENST00000535621 RASGRF1Q13972 1273 aa25.16■■□□□ 1.62
PDXDC1-205ENST00000535621 SPATA5Q8NB90 893 aa25.16■■□□□ 1.62
PDXDC1-205ENST00000535621 ANP32EQ9BTT0 268 aa25.16■■□□□ 1.62
PDXDC1-205ENST00000535621 MAST3O60307 1309 aa25.15■■□□□ 1.62
PDXDC1-205ENST00000535621 PSDA5PKW4 1024 aaPredicted RBP25.15■■□□□ 1.62
PDXDC1-205ENST00000535621 CHRNA5P30532 468 aa25.15■■□□□ 1.62
PDXDC1-205ENST00000535621 SLC27A2O14975 620 aa25.14■■□□□ 1.62
PDXDC1-205ENST00000535621 ZKSCAN1P17029 563 aaPredicted RBP25.14■■□□□ 1.62
PDXDC1-205ENST00000535621 OLFM4Q6UX06 510 aa25.14■■□□□ 1.62
PDXDC1-205ENST00000535621 OSBP2Q969R2 916 aa25.14■■□□□ 1.62
PDXDC1-205ENST00000535621 PIH1D3Q9NQM4 214 aaKnown RBP25.14■■□□□ 1.62
PDXDC1-205ENST00000535621 ATF5Q9Y2D1 282 aaPredicted RBP25.14■■□□□ 1.62
PDXDC1-205ENST00000535621 DDIT3P35638 169 aa25.13■■□□□ 1.61
PDXDC1-205ENST00000535621 PDE6BP35913 854 aa25.13■■□□□ 1.61
PDXDC1-205ENST00000535621 GYG1P46976 350 aa25.13■■□□□ 1.61
PDXDC1-205ENST00000535621 MCM2P49736 904 aa25.13■■□□□ 1.61
PDXDC1-205ENST00000535621 GPR101Q96P66 508 aaPredicted RBP25.13■■□□□ 1.61
PDXDC1-205ENST00000535621 CRAMP1Q96RY5 1269 aa25.13■■□□□ 1.61
PDXDC1-205ENST00000535621 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.13■■□□□ 1.618e-7■■□□□ 14.4
PDXDC1-205ENST00000535621 ZNF804BA4D1E1 1349 aa25.13■■□□□ 1.61
PDXDC1-205ENST00000535621 ILDR2Q71H61 639 aa25.13■■□□□ 1.61
PDXDC1-205ENST00000535621 C2CD5Q86YS7 1000 aa25.13■■□□□ 1.61
PDXDC1-205ENST00000535621 ANKRD2Q9GZV1 360 aa25.13■■□□□ 1.61
PDXDC1-205ENST00000535621 M0R2C6 588 aa25.12■■□□□ 1.61
PDXDC1-205ENST00000535621 ADCK5Q3MIX3 580 aa25.12■■□□□ 1.61
PDXDC1-205ENST00000535621 RNF20Q5VTR2 975 aa25.12■■□□□ 1.61
PDXDC1-205ENST00000535621 IQSEC3Q9UPP2 1182 aaPredicted RBP25.12■■□□□ 1.61
PDXDC1-205ENST00000535621 LRRC37AA6NMS7 1700 aa25.12■■□□□ 1.61
PDXDC1-205ENST00000535621 HSP90AA1P07900 732 aaKnown RBP25.12■■□□□ 1.61
PDXDC1-205ENST00000535621 GPSM2P81274 684 aa25.12■■□□□ 1.61
PDXDC1-205ENST00000535621 TXNRD3Q86VQ6 643 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms