RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 NSFL1CQ9UNZ2 370 aaKnown RBP20.65■□□□□ 0.9
SFSWAP-203ENST00000535236 ATP8B2P98198 1209 aa20.64■□□□□ 0.9
SFSWAP-203ENST00000535236 FAM212AQ96EL1 285 aa20.64■□□□□ 0.9
SFSWAP-203ENST00000535236 DISP3Q9P2K9 1392 aa20.64■□□□□ 0.89
SFSWAP-203ENST00000535236 NBPF14Q5TI25 921 aa20.64■□□□□ 0.89
SFSWAP-203ENST00000535236 TRIM75PA6NK02 468 aa20.64■□□□□ 0.89
SFSWAP-203ENST00000535236 TNNI2P48788 182 aa20.64■□□□□ 0.89
SFSWAP-203ENST00000535236 DPH6Q7L8W6 267 aa20.64■□□□□ 0.89
SFSWAP-203ENST00000535236 MARCKSP29966 332 aaPredicted RBP20.64■□□□□ 0.89
SFSWAP-203ENST00000535236 SBNO2Q9Y2G9 1366 aa20.63■□□□□ 0.89
SFSWAP-203ENST00000535236 GJC1P36383 396 aa20.63■□□□□ 0.89
SFSWAP-203ENST00000535236 ESYT1Q9BSJ8 1104 aa20.63■□□□□ 0.89
SFSWAP-203ENST00000535236 PPIP5K1Q6PFW1 1433 aa20.63■□□□□ 0.89
SFSWAP-203ENST00000535236 ANKRD2Q9GZV1 360 aa20.63■□□□□ 0.89
SFSWAP-203ENST00000535236 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
SFSWAP-203ENST00000535236 HDAC1Q13547 482 aaPredicted RBP20.63■□□□□ 0.89
SFSWAP-203ENST00000535236 HSP90AA4PQ58FG1 418 aa20.63■□□□□ 0.89
SFSWAP-203ENST00000535236 DHX58Q96C10 678 aa20.63■□□□□ 0.89
SFSWAP-203ENST00000535236 RIMBP2O15034 1052 aa20.63■□□□□ 0.89
SFSWAP-203ENST00000535236 IGHDP01880 384 aa20.62■□□□□ 0.89
SFSWAP-203ENST00000535236 EEF2P13639 858 aaKnown RBP20.62■□□□□ 0.89
SFSWAP-203ENST00000535236 PLCD3Q8N3E9 789 aa20.62■□□□□ 0.89
SFSWAP-203ENST00000535236 WWC3Q9ULE0 1092 aa20.62■□□□□ 0.89
SFSWAP-203ENST00000535236 RALGAPBQ86X10 1494 aa20.62■□□□□ 0.89
SFSWAP-203ENST00000535236 IRS4O14654 1257 aaPredicted RBP20.62■□□□□ 0.89
SFSWAP-203ENST00000535236 NMIQ13287 307 aaPredicted RBP20.62■□□□□ 0.89
SFSWAP-203ENST00000535236 RNF113AO15541 343 aaKnown RBP20.62■□□□□ 0.89
SFSWAP-203ENST00000535236 KIF4AO95239 1232 aa20.62■□□□□ 0.89
SFSWAP-203ENST00000535236 HCLS1P14317 486 aaPredicted RBP20.62■□□□□ 0.89
SFSWAP-203ENST00000535236 KRT2P35908 639 aa20.62■□□□□ 0.89
SFSWAP-203ENST00000535236 LRSAM1Q6UWE0 723 aa20.62■□□□□ 0.89
SFSWAP-203ENST00000535236 CNPY2Q9Y2B0 182 aa20.62■□□□□ 0.89
SFSWAP-203ENST00000535236 MAGEB6Q8N7X4 407 aa20.61■□□□□ 0.89
SFSWAP-203ENST00000535236 ANKRD44Q8N8A2 993 aa20.61■□□□□ 0.89
SFSWAP-203ENST00000535236 ANO6Q4KMQ2 910 aa20.61■□□□□ 0.89
SFSWAP-203ENST00000535236 TICAM2Q86XR7 235 aa20.61■□□□□ 0.89
SFSWAP-203ENST00000535236 MIGA1Q8NAN2 632 aa20.61■□□□□ 0.89
SFSWAP-203ENST00000535236 LMBR1Q8WVP7 490 aa20.61■□□□□ 0.89
SFSWAP-203ENST00000535236 CCDC77Q9BR77 488 aa20.61■□□□□ 0.89
SFSWAP-203ENST00000535236 GRIN2AQ12879 1464 aa20.61■□□□□ 0.89
SFSWAP-203ENST00000535236 LDHBP07195 334 aaKnown RBP20.61■□□□□ 0.89
SFSWAP-203ENST00000535236 GSTA5Q7RTV2 222 aa20.61■□□□□ 0.89
SFSWAP-203ENST00000535236 CCDC171Q6TFL3 1326 aa20.61■□□□□ 0.89
SFSWAP-203ENST00000535236 KLHL40Q2TBA0 621 aa20.61■□□□□ 0.89
SFSWAP-203ENST00000535236 HS2ST1Q7LGA3 356 aa20.6■□□□□ 0.89
SFSWAP-203ENST00000535236 TBC1D32Q96NH3 1257 aa20.6■□□□□ 0.89
SFSWAP-203ENST00000535236 TACC1O75410 805 aa20.6■□□□□ 0.89
SFSWAP-203ENST00000535236 LMOD1P29536 600 aaPredicted RBP20.6■□□□□ 0.89
SFSWAP-203ENST00000535236 RAB3IL1Q8TBN0 382 aa20.6■□□□□ 0.89
SFSWAP-203ENST00000535236 PAXBP1Q9Y5B6 917 aa20.6■□□□□ 0.89
SFSWAP-203ENST00000535236 ZSCAN23Q3MJ62 389 aa20.6■□□□□ 0.89
SFSWAP-203ENST00000535236 MSANTD4Q8NCY6 345 aa20.6■□□□□ 0.89
SFSWAP-203ENST00000535236 ZBTB21Q9ULJ3 1066 aa20.6■□□□□ 0.89
SFSWAP-203ENST00000535236 PA2G4Q9UQ80 394 aaKnown RBP20.6■□□□□ 0.89
SFSWAP-203ENST00000535236 CTAGE15A4D2H0 777 aa20.59■□□□□ 0.89
SFSWAP-203ENST00000535236 TMEM110-MUSTN1A8MSY1 372 aa20.59■□□□□ 0.89
SFSWAP-203ENST00000535236 ECM2O94769 699 aaPredicted RBP20.59■□□□□ 0.89
SFSWAP-203ENST00000535236 CTAGE8P0CG41 777 aa20.59■□□□□ 0.89
SFSWAP-203ENST00000535236 CTAGE6Q86UF2 777 aa20.59■□□□□ 0.89
SFSWAP-203ENST00000535236 CTAGE4Q8IX94 777 aa20.59■□□□□ 0.89
SFSWAP-203ENST00000535236 WDR7Q9Y4E6 1490 aa20.59■□□□□ 0.89
SFSWAP-203ENST00000535236 ATP2A1O14983 1001 aa20.59■□□□□ 0.89
SFSWAP-203ENST00000535236 PTGS1P23219 599 aa20.59■□□□□ 0.89
SFSWAP-203ENST00000535236 TAF12Q16514 161 aa20.59■□□□□ 0.89
SFSWAP-203ENST00000535236 NDC80O14777 642 aa20.59■□□□□ 0.89
SFSWAP-203ENST00000535236 GNA11P29992 359 aa20.59■□□□□ 0.89
SFSWAP-203ENST00000535236 ARID5AQ03989 594 aa20.59■□□□□ 0.89
SFSWAP-203ENST00000535236 HELBQ8NG08 1087 aaPredicted RBP20.59■□□□□ 0.89
SFSWAP-203ENST00000535236 LINS1Q8NG48 757 aa20.59■□□□□ 0.89
SFSWAP-203ENST00000535236 RNF216Q9NWF9 866 aaPredicted RBP20.59■□□□□ 0.89
SFSWAP-203ENST00000535236 NFATC2IPQ8NCF5 419 aa20.59■□□□□ 0.89
SFSWAP-203ENST00000535236 PAIP2Q9BPZ3 127 aaKnown RBP20.59■□□□□ 0.89
SFSWAP-203ENST00000535236 MRPL50Q8N5N7 158 aaKnown RBP20.59■□□□□ 0.89
SFSWAP-203ENST00000535236 CUL7Q14999 1698 aa20.58■□□□□ 0.89
SFSWAP-203ENST00000535236 BICDL2A1A5D9 508 aa20.58■□□□□ 0.89
SFSWAP-203ENST00000535236 FBF1Q8TES7 1133 aa20.58■□□□□ 0.89
SFSWAP-203ENST00000535236 LRRC59Q96AG4 307 aaKnown RBP20.58■□□□□ 0.89
SFSWAP-203ENST00000535236 SERPINA10Q9UK55 444 aa20.58■□□□□ 0.89
SFSWAP-203ENST00000535236 CCDC50Q8IVM0 306 aa20.58■□□□□ 0.88
SFSWAP-203ENST00000535236 CABLES1Q8TDN4 633 aa20.58■□□□□ 0.88
SFSWAP-203ENST00000535236 SPTLC2O15270 562 aa20.58■□□□□ 0.88
SFSWAP-203ENST00000535236 EIF4A2Q14240 407 aaKnown RBP20.58■□□□□ 0.88
SFSWAP-203ENST00000535236 BACH1O14867 736 aa20.57■□□□□ 0.88
SFSWAP-203ENST00000535236 GTF2F1P35269 517 aaKnown RBP eCLIP20.57■□□□□ 0.88
SFSWAP-203ENST00000535236 PLCB3Q01970 1234 aa20.57■□□□□ 0.88
SFSWAP-203ENST00000535236 BMS1Q14692 1282 aaKnown RBP20.57■□□□□ 0.88
SFSWAP-203ENST00000535236 AOPEPQ8N6M6 819 aa20.57■□□□□ 0.88
SFSWAP-203ENST00000535236 RBM17Q96I25 401 aaKnown RBP20.57■□□□□ 0.88
SFSWAP-203ENST00000535236 UHRF1BP1LA0JNW5 1464 aa20.57■□□□□ 0.88
SFSWAP-203ENST00000535236 RTL1A6NKG5 1358 aa20.57■□□□□ 0.88
SFSWAP-203ENST00000535236 C8orf58Q8NAV2 365 aa20.57■□□□□ 0.88
SFSWAP-203ENST00000535236 GTPBP4Q9BZE4 634 aaKnown RBP20.57■□□□□ 0.88
SFSWAP-203ENST00000535236 CEP83Q9Y592 693 aa20.57■□□□□ 0.88
SFSWAP-203ENST00000535236 KDM5BQ9UGL1 1544 aa20.57■□□□□ 0.88
SFSWAP-203ENST00000535236 TTC41PQ6P2S7 1318 aa20.57■□□□□ 0.88
SFSWAP-203ENST00000535236 PUS7Q96PZ0 661 aaKnown RBP20.57■□□□□ 0.88
SFSWAP-203ENST00000535236 AKNAD1Q5T1N1 836 aa20.56■□□□□ 0.88
SFSWAP-203ENST00000535236 USP48Q86UV5 1035 aa20.56■□□□□ 0.88
SFSWAP-203ENST00000535236 MCM7P33993 719 aa20.56■□□□□ 0.88
SFSWAP-203ENST00000535236 MXRA7P84157 204 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms