RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 PHKA1P46020 1223 aa28.61■■■□□ 2.17
PTPMT1-205ENST00000534775 PTH1RQ03431 593 aa28.61■■■□□ 2.17
PTPMT1-205ENST00000534775 ANTXR1Q9H6X2 564 aa28.61■■■□□ 2.17
PTPMT1-205ENST00000534775 MYH7P12883 1935 aa28.61■■■□□ 2.17
PTPMT1-205ENST00000534775 MAP4K1Q92918 833 aa28.61■■■□□ 2.17
PTPMT1-205ENST00000534775 ANKRD2Q9GZV1 360 aa28.61■■■□□ 2.17
PTPMT1-205ENST00000534775 KCNJ4P48050 445 aa28.6■■■□□ 2.17
PTPMT1-205ENST00000534775 ZMYM1Q5SVZ6 1142 aa28.6■■■□□ 2.17
PTPMT1-205ENST00000534775 COL23A1Q86Y22 540 aaPredicted RBP28.6■■■□□ 2.17
PTPMT1-205ENST00000534775 POLRMTO00411 1230 aaKnown RBP28.59■■■□□ 2.17
PTPMT1-205ENST00000534775 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.59■■■□□ 2.17
PTPMT1-205ENST00000534775 DDR1Q08345 913 aa28.58■■■□□ 2.17
PTPMT1-205ENST00000534775 ZSCAN25Q6NSZ9 544 aa28.58■■■□□ 2.17
PTPMT1-205ENST00000534775 ZNF589Q86UQ0 364 aaPredicted RBP28.58■■■□□ 2.17
PTPMT1-205ENST00000534775 CD2BP2O95400 341 aaKnown RBP28.58■■■□□ 2.17
PTPMT1-205ENST00000534775 GRAPQ13588 217 aa28.58■■■□□ 2.17
PTPMT1-205ENST00000534775 GRAPLQ8TC17 118 aaPredicted RBP28.58■■■□□ 2.17
PTPMT1-205ENST00000534775 KCNB2Q92953 911 aa28.58■■■□□ 2.17
PTPMT1-205ENST00000534775 RBM8AQ9Y5S9 174 aaKnown RBP28.58■■■□□ 2.17
PTPMT1-205ENST00000534775 SNX14Q9Y5W7 946 aa28.58■■■□□ 2.17
PTPMT1-205ENST00000534775 RPGRQ92834 1020 aaKnown RBP28.57■■■□□ 2.16
PTPMT1-205ENST00000534775 SNAP23O00161 211 aa28.56■■■□□ 2.16
PTPMT1-205ENST00000534775 ZKSCAN1P17029 563 aaPredicted RBP28.56■■■□□ 2.16
PTPMT1-205ENST00000534775 MCM2P49736 904 aa28.56■■■□□ 2.16
PTPMT1-205ENST00000534775 NEK4P51957 841 aa28.56■■■□□ 2.16
PTPMT1-205ENST00000534775 NECTIN1Q15223 517 aa28.56■■■□□ 2.16
PTPMT1-205ENST00000534775 CRY2Q49AN0 593 aa28.56■■■□□ 2.16
PTPMT1-205ENST00000534775 RNF20Q5VTR2 975 aa28.56■■■□□ 2.16
PTPMT1-205ENST00000534775 PRPF40BQ6NWY9 871 aaKnown RBP28.55■■■□□ 2.16
PTPMT1-205ENST00000534775 PI16Q6UXB8 463 aa28.55■■■□□ 2.16
PTPMT1-205ENST00000534775 SPATA5Q8NB90 893 aa28.55■■■□□ 2.16
PTPMT1-205ENST00000534775 GNL3LQ9NVN8 582 aaKnown RBP28.55■■■□□ 2.16
PTPMT1-205ENST00000534775 HMG20BQ9P0W2 317 aa28.55■■■□□ 2.16
PTPMT1-205ENST00000534775 NRXN2Q9P2S2 1712 aa28.55■■■□□ 2.16
PTPMT1-205ENST00000534775 CYP2E1P05181 493 aaPredicted RBP28.54■■■□□ 2.16
PTPMT1-205ENST00000534775 CAMKK2Q96RR4 588 aa28.54■■■□□ 2.16
PTPMT1-205ENST00000534775 PNPLA7Q6ZV29 1317 aa28.54■■■□□ 2.16
PTPMT1-205ENST00000534775 CAVIN4Q5BKX8 364 aa28.54■■■□□ 2.16
PTPMT1-205ENST00000534775 RBM17Q96I25 401 aaKnown RBP28.54■■■□□ 2.16
PTPMT1-205ENST00000534775 SEC62Q99442 399 aaKnown RBP28.54■■■□□ 2.16
PTPMT1-205ENST00000534775 QSER1Q2KHR3 1735 aa28.53■■■□□ 2.16
PTPMT1-205ENST00000534775 U3KPZ7 1027 aaPredicted RBP28.53■■■□□ 2.16
PTPMT1-205ENST00000534775 CHGBP05060 677 aa28.52■■■□□ 2.16
PTPMT1-205ENST00000534775 BCAMP50895 628 aa28.52■■■□□ 2.16
PTPMT1-205ENST00000534775 SF3B2Q13435 895 aaKnown RBP28.52■■■□□ 2.16
PTPMT1-205ENST00000534775 RASGRF1Q13972 1273 aa28.52■■■□□ 2.16
PTPMT1-205ENST00000534775 CREB3L3Q68CJ9 461 aa28.52■■■□□ 2.16
PTPMT1-205ENST00000534775 APPBP2Q92624 585 aa28.52■■■□□ 2.16
PTPMT1-205ENST00000534775 SLKQ9H2G2 1235 aaPredicted RBP28.52■■■□□ 2.16
PTPMT1-205ENST00000534775 DOCK2Q92608 1830 aa28.52■■■□□ 2.16
PTPMT1-205ENST00000534775 ZNF804BA4D1E1 1349 aa28.52■■■□□ 2.16
PTPMT1-205ENST00000534775 EZH2Q15910 746 aaKnown RBP28.51■■■□□ 2.15
PTPMT1-205ENST00000534775 CCDC129Q6ZRS4 1044 aa28.51■■■□□ 2.15
PTPMT1-205ENST00000534775 RASEFQ8IZ41 740 aa28.51■■■□□ 2.15
PTPMT1-205ENST00000534775 MAST3O60307 1309 aa28.51■■■□□ 2.15
PTPMT1-205ENST00000534775 HSP90AA1P07900 732 aaKnown RBP28.51■■■□□ 2.15
PTPMT1-205ENST00000534775 EN1Q05925 392 aaPredicted RBP28.51■■■□□ 2.15
PTPMT1-205ENST00000534775 WASHC4Q2M389 1173 aa28.51■■■□□ 2.15
PTPMT1-205ENST00000534775 DSCC1Q9BVC3 393 aa28.51■■■□□ 2.15
PTPMT1-205ENST00000534775 TM6SF1Q9BZW5 370 aa28.51■■■□□ 2.15
PTPMT1-205ENST00000534775 STK32BQ9NY57 414 aa28.51■■■□□ 2.15
PTPMT1-205ENST00000534775 SLC27A2O14975 620 aa28.5■■■□□ 2.15
PTPMT1-205ENST00000534775 PIH1D3Q9NQM4 214 aaKnown RBP28.5■■■□□ 2.15
PTPMT1-205ENST00000534775 KLRG2A4D1S0 409 aaPredicted RBP28.49■■■□□ 2.15
PTPMT1-205ENST00000534775 VPS37DQ86XT2 251 aa28.49■■■□□ 2.15
PTPMT1-205ENST00000534775 SPRYD3Q8NCJ5 442 aa28.49■■■□□ 2.15
PTPMT1-205ENST00000534775 HOXA10P31260 410 aaPredicted RBP28.48■■■□□ 2.15
PTPMT1-205ENST00000534775 ADD2P35612 726 aa28.48■■■□□ 2.15
PTPMT1-205ENST00000534775 UBE3CQ15386 1083 aa28.48■■■□□ 2.15
PTPMT1-205ENST00000534775 SLC15A2Q16348 729 aa28.48■■■□□ 2.15
PTPMT1-205ENST00000534775 PARP3Q9Y6F1 533 aa28.48■■■□□ 2.15
PTPMT1-205ENST00000534775 IDH1O75874 414 aaKnown RBP28.47■■■□□ 2.15
PTPMT1-205ENST00000534775 BAG6P46379 1132 aa28.47■■■□□ 2.15
PTPMT1-205ENST00000534775 SLC9C2Q5TAH2 1124 aa28.47■■■□□ 2.15
PTPMT1-205ENST00000534775 OSBP2Q969R2 916 aa28.47■■■□□ 2.15
PTPMT1-205ENST00000534775 BRIP1Q9BX63 1249 aa28.47■■■□□ 2.15
PTPMT1-205ENST00000534775 ANKRD31Q8N7Z5 1873 aa28.47■■■□□ 2.15
PTPMT1-205ENST00000534775 MYO5AQ9Y4I1 1855 aaKnown RBP28.47■■■□□ 2.15
PTPMT1-205ENST00000534775 SEMA3EO15041 775 aa28.47■■■□□ 2.15
PTPMT1-205ENST00000534775 PSMA5P28066 241 aa28.47■■■□□ 2.15
PTPMT1-205ENST00000534775 GYG1P46976 350 aa28.47■■■□□ 2.15
PTPMT1-205ENST00000534775 MAP3K12Q12852 859 aa28.47■■■□□ 2.15
PTPMT1-205ENST00000534775 TSGA10IPQ3SY00 556 aa28.47■■■□□ 2.15
PTPMT1-205ENST00000534775 SLFNL1Q499Z3 407 aa28.47■■■□□ 2.15
PTPMT1-205ENST00000534775 CRAMP1Q96RY5 1269 aa28.47■■■□□ 2.15
PTPMT1-205ENST00000534775 UPF3BQ9BZI7 483 aaKnown RBP28.47■■■□□ 2.15
PTPMT1-205ENST00000534775 LEMD3Q9Y2U8 911 aa28.47■■■□□ 2.15
PTPMT1-205ENST00000534775 M0R2C6 588 aa28.46■■■□□ 2.15
PTPMT1-205ENST00000534775 BBOX1O75936 387 aa28.46■■■□□ 2.15
PTPMT1-205ENST00000534775 KRT32Q14532 448 aa28.46■■■□□ 2.15
PTPMT1-205ENST00000534775 MMP10P09238 476 aa28.45■■■□□ 2.14
PTPMT1-205ENST00000534775 TMC4Q7Z404 712 aa28.45■■■□□ 2.14
PTPMT1-205ENST00000534775 FAM84BQ96KN1 310 aaPredicted RBP28.45■■■□□ 2.14
PTPMT1-205ENST00000534775 JAKMIP1Q96N16 626 aaKnown RBP28.45■■■□□ 2.14
PTPMT1-205ENST00000534775 DENND2AQ9ULE3 1009 aa28.45■■■□□ 2.14
PTPMT1-205ENST00000534775 XDHP47989 1333 aa28.45■■■□□ 2.14
PTPMT1-205ENST00000534775 CASTP20810 708 aaKnown RBP28.44■■■□□ 2.14
PTPMT1-205ENST00000534775 FBXO33Q7Z6M2 555 aa28.44■■■□□ 2.14
PTPMT1-205ENST00000534775 ANKIB1Q9P2G1 1089 aa28.44■■■□□ 2.14
PTPMT1-205ENST00000534775 MYH13Q9UKX3 1938 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms