RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 HIRAP54198 1017 aaPredicted RBP7.15□□□□□ -1.26
ECHDC1-223ENST00000534442 RELBQ01201 579 aa7.15□□□□□ -1.26
ECHDC1-223ENST00000534442 TRIM67Q6ZTA4 783 aa7.15□□□□□ -1.26
ECHDC1-223ENST00000534442 PPARGC1BQ86YN6 1023 aaKnown RBP7.15□□□□□ -1.26
ECHDC1-223ENST00000534442 CYP4X1Q8N118 509 aa7.15□□□□□ -1.26
ECHDC1-223ENST00000534442 ZNF395Q9H8N7 513 aaPredicted RBP7.15□□□□□ -1.26
ECHDC1-223ENST00000534442 KIAA1522Q9P206 1035 aaPredicted RBP7.15□□□□□ -1.26
ECHDC1-223ENST00000534442 PLEKHG1Q9ULL1 1385 aa7.15□□□□□ -1.26
ECHDC1-223ENST00000534442 CLIP1P30622 1438 aa7.15□□□□□ -1.27
ECHDC1-223ENST00000534442 MEGF6O75095 1541 aa7.15□□□□□ -1.27
ECHDC1-223ENST00000534442 ZBTB39O15060 712 aa7.14□□□□□ -1.27
ECHDC1-223ENST00000534442 ADGRL2O95490 1459 aa7.14□□□□□ -1.27
ECHDC1-223ENST00000534442 NOS2P35228 1153 aa7.14□□□□□ -1.27
ECHDC1-223ENST00000534442 XPCQ01831 940 aaPredicted RBP7.14□□□□□ -1.27
ECHDC1-223ENST00000534442 TAGLNQ01995 201 aaKnown RBP7.14□□□□□ -1.27
ECHDC1-223ENST00000534442 FBXO33Q7Z6M2 555 aa7.14□□□□□ -1.27
ECHDC1-223ENST00000534442 NBPF15Q8N660 670 aa7.14□□□□□ -1.27
ECHDC1-223ENST00000534442 SMC1BQ8NDV3 1235 aa7.14□□□□□ -1.27
ECHDC1-223ENST00000534442 GIPC2Q8TF65 315 aa7.14□□□□□ -1.27
ECHDC1-223ENST00000534442 PXDNQ92626 1479 aa7.14□□□□□ -1.27
ECHDC1-223ENST00000534442 NLRP3Q96P20 1036 aa7.14□□□□□ -1.27
ECHDC1-223ENST00000534442 STIM2Q9P246 746 aa7.14□□□□□ -1.27
ECHDC1-223ENST00000534442 HCN4Q9Y3Q4 1203 aa7.14□□□□□ -1.27
ECHDC1-223ENST00000534442 TBX22Q9Y458 520 aa7.14□□□□□ -1.27
ECHDC1-223ENST00000534442 PARP3Q9Y6F1 533 aa7.14□□□□□ -1.27
ECHDC1-223ENST00000534442 FZD6O60353 706 aa7.13□□□□□ -1.27
ECHDC1-223ENST00000534442 POLD1P28340 1107 aa7.13□□□□□ -1.27
ECHDC1-223ENST00000534442 EIF1AXP47813 144 aaKnown RBP7.13□□□□□ -1.27
ECHDC1-223ENST00000534442 SOX10P56693 466 aa7.13□□□□□ -1.27
ECHDC1-223ENST00000534442 ZSCAN29Q8IWY8 852 aaPredicted RBP7.13□□□□□ -1.27
ECHDC1-223ENST00000534442 RGL4Q8IZJ4 473 aa7.13□□□□□ -1.27
ECHDC1-223ENST00000534442 MEIOBQ8N635 442 aa7.13□□□□□ -1.27
ECHDC1-223ENST00000534442 HPS1Q92902 700 aa7.13□□□□□ -1.27
ECHDC1-223ENST00000534442 L3MBTL2Q969R5 705 aa7.13□□□□□ -1.27
ECHDC1-223ENST00000534442 RBCK1Q9BYM8 510 aa7.13□□□□□ -1.27
ECHDC1-223ENST00000534442 CCDC87Q9NVE4 849 aa7.13□□□□□ -1.27
ECHDC1-223ENST00000534442 CABP1Q9NZU7 370 aa7.13□□□□□ -1.27
ECHDC1-223ENST00000534442 CDC42BPAQ5VT25 1732 aa7.13□□□□□ -1.27
ECHDC1-223ENST00000534442 SPATA31A5Q5VU36 1347 aa7.12□□□□□ -1.27
ECHDC1-223ENST00000534442 SPATA31A7Q8IWB4 1347 aa7.12□□□□□ -1.27
ECHDC1-223ENST00000534442 PLSCR1O15162 318 aa7.12□□□□□ -1.27
ECHDC1-223ENST00000534442 TMC7Q7Z402 723 aa7.12□□□□□ -1.27
ECHDC1-223ENST00000534442 ALDH16A1Q8IZ83 802 aa7.12□□□□□ -1.27
ECHDC1-223ENST00000534442 ZSCAN10Q96SZ4 725 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-223ENST00000534442 GRIP2Q9C0E4 1043 aa7.12□□□□□ -1.27
ECHDC1-223ENST00000534442 ZNF232Q9UNY5 417 aa7.12□□□□□ -1.27
ECHDC1-223ENST00000534442 CDK11AQ9UQ88 783 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-223ENST00000534442 CHMP3Q9Y3E7 222 aa7.12□□□□□ -1.27
ECHDC1-223ENST00000534442 NALCNQ8IZF0 1738 aa7.12□□□□□ -1.27
ECHDC1-223ENST00000534442 FYCO1Q9BQS8 1478 aa7.11□□□□□ -1.27
ECHDC1-223ENST00000534442 UNC80Q8N2C7 3258 aa7.11□□□□□ -1.27
ECHDC1-223ENST00000534442 MRRFQ96E11 262 aaKnown RBP7.11□□□□□ -1.27
ECHDC1-223ENST00000534442 NIFKQ9BYG3 293 aaKnown RBP7.11□□□□□ -1.27
ECHDC1-223ENST00000534442 PHACTR1Q9C0D0 580 aa7.11□□□□□ -1.27
ECHDC1-223ENST00000534442 MCOLN1Q9GZU1 580 aa7.11□□□□□ -1.27
ECHDC1-223ENST00000534442 PTPRUQ92729 1446 aa7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 PIK3R4Q99570 1358 aa7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 TOPAZ1Q8N9V7 1692 aa7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 NPHP3Q7Z494 1330 aa7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 NDUFB5O43674 189 aa7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 IGHA2P01877 340 aa7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 PRR20EP86478 221 aa7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 PRR20CP86479 221 aa7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 PRR20DP86480 221 aa7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 PRR20BP86481 221 aa7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 PRR20AP86496 221 aa7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 PDE3BQ13370 1112 aa7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 COL19A1Q14993 1142 aa7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 RTN1Q16799 776 aa7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 ALKBH2Q6NS38 261 aa7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 TMEM214Q6NUQ4 689 aaKnown RBP7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 ATCAYQ86WG3 371 aa7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 ETFBKMTQ8IXQ9 262 aa7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 IGSF5Q9NSI5 407 aa7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 KLK14Q9P0G3 267 aa7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 BRPF3Q9ULD4 1205 aa7.1□□□□□ -1.27
ECHDC1-223ENST00000534442 BRD2P25440 801 aaKnown RBP7.09□□□□□ -1.27
ECHDC1-223ENST00000534442 GPC1P35052 558 aa7.09□□□□□ -1.27
ECHDC1-223ENST00000534442 PLA2G5P39877 138 aa7.09□□□□□ -1.27
ECHDC1-223ENST00000534442 TXLNAP40222 546 aa7.09□□□□□ -1.27
ECHDC1-223ENST00000534442 RNF144AP50876 292 aaPredicted RBP7.09□□□□□ -1.27
ECHDC1-223ENST00000534442 DGKZQ13574 1117 aa7.09□□□□□ -1.27
ECHDC1-223ENST00000534442 C11orf91Q3C1V1 193 aa7.09□□□□□ -1.27
ECHDC1-223ENST00000534442 PMFBP1Q8TBY8 1022 aa7.09□□□□□ -1.27
ECHDC1-223ENST00000534442 RHBDD1Q8TEB9 315 aa7.09□□□□□ -1.27
ECHDC1-223ENST00000534442 C7orf43Q8WVR3 580 aa7.09□□□□□ -1.27
ECHDC1-223ENST00000534442 INSM2Q96T92 566 aaPredicted RBP7.09□□□□□ -1.27
ECHDC1-223ENST00000534442 BTG4Q9NY30 223 aa7.09□□□□□ -1.27
ECHDC1-223ENST00000534442 CEP152O94986 1710 aa7.09□□□□□ -1.27
ECHDC1-223ENST00000534442 ADAMTS13Q76LX8 1427 aa7.09□□□□□ -1.28
ECHDC1-223ENST00000534442 KIAA1107Q9UPP5 1409 aa7.09□□□□□ -1.28
ECHDC1-223ENST00000534442 SPINT1O43278 529 aa7.08□□□□□ -1.28
ECHDC1-223ENST00000534442 TREHO43280 583 aa7.08□□□□□ -1.28
ECHDC1-223ENST00000534442 P4HBP07237 508 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-223ENST00000534442 DSC3Q14574 896 aa7.08□□□□□ -1.28
ECHDC1-223ENST00000534442 C4orf17Q53FE4 359 aa7.08□□□□□ -1.28
ECHDC1-223ENST00000534442 ZNF326Q5BKZ1 582 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-223ENST00000534442 C1orf53Q5VUE5 145 aa7.08□□□□□ -1.28
ECHDC1-223ENST00000534442 ABTB2Q8N961 1025 aa7.08□□□□□ -1.28
ECHDC1-223ENST00000534442 IFT43Q96FT9 208 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms