RNA–Protein interactions for RNA: ENST00000534159.5

CHRDL2-208, Transcript of chordin like 2, humanhuman

TSL 2

Gene CHRDL2, Length 1,971 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-208ENST00000534159 GRAPLQ8TC17 118 aaPredicted RBP16.95■□□□□ 0.3
CHRDL2-208ENST00000534159 RBM17Q96I25 401 aaKnown RBP16.95■□□□□ 0.3
CHRDL2-208ENST00000534159 ANKRD2Q9GZV1 360 aa16.95■□□□□ 0.3
CHRDL2-208ENST00000534159 CHGBP05060 677 aa16.94■□□□□ 0.3
CHRDL2-208ENST00000534159 MMP10P09238 476 aa16.94■□□□□ 0.3
CHRDL2-208ENST00000534159 ARID4AP29374 1257 aaPredicted RBP16.94■□□□□ 0.3
CHRDL2-208ENST00000534159 UBE4AQ14139 1066 aa16.94■□□□□ 0.3
CHRDL2-208ENST00000534159 LRRFIP1Q32MZ4 808 aaKnown RBP16.94■□□□□ 0.3
CHRDL2-208ENST00000534159 PARP3Q9Y6F1 533 aa16.94■□□□□ 0.3
CHRDL2-208ENST00000534159 A0A1B0GUL6 1792 aa16.94■□□□□ 0.3
CHRDL2-208ENST00000534159 RNF113AO15541 343 aaKnown RBP16.93■□□□□ 0.3
CHRDL2-208ENST00000534159 BCAMP50895 628 aa16.93■□□□□ 0.3
CHRDL2-208ENST00000534159 PTH1RQ03431 593 aa16.93■□□□□ 0.3
CHRDL2-208ENST00000534159 NBR1Q14596 966 aa16.93■□□□□ 0.3
CHRDL2-208ENST00000534159 MCMDC2Q4G0Z9 681 aa16.93■□□□□ 0.3
CHRDL2-208ENST00000534159 PALD1Q9ULE6 856 aa16.93■□□□□ 0.3
CHRDL2-208ENST00000534159 AKAP11Q9UKA4 1901 aa16.92■□□□□ 0.3
CHRDL2-208ENST00000534159 CCDC171Q6TFL3 1326 aa16.92■□□□□ 0.3
CHRDL2-208ENST00000534159 HSPA4P34932 840 aa16.92■□□□□ 0.3
CHRDL2-208ENST00000534159 TTF1Q15361 905 aaPredicted RBP16.92■□□□□ 0.3
CHRDL2-208ENST00000534159 TICAM2Q86XR7 235 aa16.92■□□□□ 0.3
CHRDL2-208ENST00000534159 WTIPA6NIX2 430 aaPredicted RBP16.91■□□□□ 0.3
CHRDL2-208ENST00000534159 SLFNL1Q499Z3 407 aa16.91■□□□□ 0.3
CHRDL2-208ENST00000534159 CRY2Q49AN0 593 aa16.91■□□□□ 0.3
CHRDL2-208ENST00000534159 ZNF589Q86UQ0 364 aaPredicted RBP16.91■□□□□ 0.3
CHRDL2-208ENST00000534159 SPATA5Q8NB90 893 aa16.91■□□□□ 0.3
CHRDL2-208ENST00000534159 SNX21Q969T3 373 aa16.91■□□□□ 0.3
CHRDL2-208ENST00000534159 SEC62Q99442 399 aaKnown RBP16.91■□□□□ 0.3
CHRDL2-208ENST00000534159 HMG20BQ9P0W2 317 aa16.91■□□□□ 0.3
CHRDL2-208ENST00000534159 MED23Q9ULK4 1368 aa16.91■□□□□ 0.3
CHRDL2-208ENST00000534159 CYP2E1P05181 493 aaPredicted RBP16.91■□□□□ 0.3
CHRDL2-208ENST00000534159 GYG1P46976 350 aa16.91■□□□□ 0.3
CHRDL2-208ENST00000534159 ANAPC15P60006 121 aa16.91■□□□□ 0.3
CHRDL2-208ENST00000534159 CAVIN4Q5BKX8 364 aa16.91■□□□□ 0.3
CHRDL2-208ENST00000534159 CCDC129Q6ZRS4 1044 aa16.91■□□□□ 0.3
CHRDL2-208ENST00000534159 VPS37DQ86XT2 251 aa16.91■□□□□ 0.3
CHRDL2-208ENST00000534159 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.91■□□□□ 0.3
CHRDL2-208ENST00000534159 HELLSQ9NRZ9 838 aa16.91■□□□□ 0.3
CHRDL2-208ENST00000534159 GNL3LQ9NVN8 582 aaKnown RBP16.91■□□□□ 0.3
CHRDL2-208ENST00000534159 ANKIB1Q9P2G1 1089 aa16.91■□□□□ 0.3
CHRDL2-208ENST00000534159 ZMYM1Q5SVZ6 1142 aa16.9■□□□□ 0.3
CHRDL2-208ENST00000534159 BRIP1Q9BX63 1249 aa16.9■□□□□ 0.3
CHRDL2-208ENST00000534159 PIH1D3Q9NQM4 214 aaKnown RBP16.9■□□□□ 0.3
CHRDL2-208ENST00000534159 ZFYP08048 801 aaPredicted RBP16.89■□□□□ 0.3
CHRDL2-208ENST00000534159 RASGRF1Q13972 1273 aa16.89■□□□□ 0.3
CHRDL2-208ENST00000534159 WASHC4Q2M389 1173 aa16.89■□□□□ 0.3
CHRDL2-208ENST00000534159 PRPF40BQ6NWY9 871 aaKnown RBP16.89■□□□□ 0.3
CHRDL2-208ENST00000534159 RBM8AQ9Y5S9 174 aaKnown RBP16.89■□□□□ 0.3
CHRDL2-208ENST00000534159 ZNF804BA4D1E1 1349 aa16.89■□□□□ 0.29
CHRDL2-208ENST00000534159 ZSCAN25Q6NSZ9 544 aa16.89■□□□□ 0.29
CHRDL2-208ENST00000534159 IQSEC3Q9UPP2 1182 aaPredicted RBP16.89■□□□□ 0.29
CHRDL2-208ENST00000534159 IDH1O75874 414 aaKnown RBP16.88■□□□□ 0.29
CHRDL2-208ENST00000534159 HOXA10P31260 410 aaPredicted RBP16.88■□□□□ 0.29
CHRDL2-208ENST00000534159 SPRYD3Q8NCJ5 442 aa16.88■□□□□ 0.29
CHRDL2-208ENST00000534159 MAP4K1Q92918 833 aa16.88■□□□□ 0.29
CHRDL2-208ENST00000534159 CRAMP1Q96RY5 1269 aa16.88■□□□□ 0.29
CHRDL2-208ENST00000534159 MYH7P12883 1935 aa16.88■□□□□ 0.29
CHRDL2-208ENST00000534159 KLRG2A4D1S0 409 aaPredicted RBP16.88■□□□□ 0.29
CHRDL2-208ENST00000534159 ST18O60284 1047 aa16.88■□□□□ 0.29
CHRDL2-208ENST00000534159 BBOX1O75936 387 aa16.88■□□□□ 0.29
CHRDL2-208ENST00000534159 DEKP35659 375 aaKnown RBP16.88■□□□□ 0.29
CHRDL2-208ENST00000534159 SNX14Q9Y5W7 946 aa16.88■□□□□ 0.29
CHRDL2-208ENST00000534159 NRXN2Q9P2S2 1712 aa16.87■□□□□ 0.29
CHRDL2-208ENST00000534159 ANKRD31Q8N7Z5 1873 aa16.87■□□□□ 0.29
CHRDL2-208ENST00000534159 CD2BP2O95400 341 aaKnown RBP16.87■□□□□ 0.29
CHRDL2-208ENST00000534159 PDE6BP35913 854 aa16.87■□□□□ 0.29
CHRDL2-208ENST00000534159 NEK4P51957 841 aa16.87■□□□□ 0.29
CHRDL2-208ENST00000534159 SLC9C2Q5TAH2 1124 aa16.87■□□□□ 0.29
CHRDL2-208ENST00000534159 FAM84BQ96KN1 310 aaPredicted RBP16.87■□□□□ 0.29
CHRDL2-208ENST00000534159 MAST3O60307 1309 aa16.87■□□□□ 0.29
CHRDL2-208ENST00000534159 M0R2C6 588 aa16.86■□□□□ 0.29
CHRDL2-208ENST00000534159 FRAT2O75474 233 aaPredicted RBP16.86■□□□□ 0.29
CHRDL2-208ENST00000534159 KLRK1P26718 216 aa16.86■□□□□ 0.29
CHRDL2-208ENST00000534159 SLC51AQ86UW1 340 aa16.86■□□□□ 0.29
CHRDL2-208ENST00000534159 RASEFQ8IZ41 740 aa16.86■□□□□ 0.29
CHRDL2-208ENST00000534159 MYO5AQ9Y4I1 1855 aaKnown RBP16.86■□□□□ 0.29
CHRDL2-208ENST00000534159 XDHP47989 1333 aa16.86■□□□□ 0.29
CHRDL2-208ENST00000534159 QSER1Q2KHR3 1735 aa16.86■□□□□ 0.29
CHRDL2-208ENST00000534159 ZKSCAN1P17029 563 aaPredicted RBP16.86■□□□□ 0.29
CHRDL2-208ENST00000534159 HIBADHP31937 336 aaKnown RBP16.86■□□□□ 0.29
CHRDL2-208ENST00000534159 NECTIN1Q15223 517 aa16.86■□□□□ 0.29
CHRDL2-208ENST00000534159 CREB3L3Q68CJ9 461 aa16.86■□□□□ 0.29
CHRDL2-208ENST00000534159 FBXO33Q7Z6M2 555 aa16.86■□□□□ 0.29
CHRDL2-208ENST00000534159 APPBP2Q92624 585 aa16.86■□□□□ 0.29
CHRDL2-208ENST00000534159 OSBP2Q969R2 916 aa16.86■□□□□ 0.29
CHRDL2-208ENST00000534159 LEMD3Q9Y2U8 911 aa16.86■□□□□ 0.29
CHRDL2-208ENST00000534159 GPSM2P81274 684 aa16.85■□□□□ 0.29
CHRDL2-208ENST00000534159 MAP3K12Q12852 859 aa16.85■□□□□ 0.29
CHRDL2-208ENST00000534159 RNF20Q5VTR2 975 aa16.85■□□□□ 0.29
CHRDL2-208ENST00000534159 NSFL1CQ9UNZ2 370 aaKnown RBP16.85■□□□□ 0.29
CHRDL2-208ENST00000534159 K7ELQ4 463 aaPredicted RBP16.84■□□□□ 0.29
CHRDL2-208ENST00000534159 SLC27A2O14975 620 aa16.84■□□□□ 0.29
CHRDL2-208ENST00000534159 NPR1P16066 1061 aa16.84■□□□□ 0.29
CHRDL2-208ENST00000534159 ADD2P35612 726 aa16.84■□□□□ 0.29
CHRDL2-208ENST00000534159 IL17RAQ96F46 866 aa16.84■□□□□ 0.29
CHRDL2-208ENST00000534159 WWC3Q9ULE0 1092 aa16.84■□□□□ 0.29
CHRDL2-208ENST00000534159 DENND2AQ9ULE3 1009 aa16.84■□□□□ 0.29
CHRDL2-208ENST00000534159 U3KPZ7 1027 aaPredicted RBP16.84■□□□□ 0.29
CHRDL2-208ENST00000534159 PPEF1O14829 653 aaPredicted RBP16.84■□□□□ 0.29
CHRDL2-208ENST00000534159 SRGNP10124 158 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms