RNA–Protein interactions for RNA: ENST00000533395.5

FOXRED1-215, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 5

Gene FOXRED1, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-215ENST00000533395 FTSJ3Q8IY81 847 aaKnown RBP23.28■■□□□ 1.32
FOXRED1-215ENST00000533395 COA1Q9GZY4 146 aa23.28■■□□□ 1.32
FOXRED1-215ENST00000533395 HDAC5Q9UQL6 1122 aa23.28■■□□□ 1.32
FOXRED1-215ENST00000533395 USP17L3A6NCW0 530 aa23.27■■□□□ 1.32
FOXRED1-215ENST00000533395 USP17L4A6NCW7 530 aa23.27■■□□□ 1.32
FOXRED1-215ENST00000533395 GNAI3P08754 354 aa23.27■■□□□ 1.32
FOXRED1-215ENST00000533395 VIL1P09327 827 aaKnown RBP23.27■■□□□ 1.32
FOXRED1-215ENST00000533395 METTL24Q5JXM2 366 aa23.27■■□□□ 1.32
FOXRED1-215ENST00000533395 USP17L1Q7RTZ2 530 aa23.27■■□□□ 1.32
FOXRED1-215ENST00000533395 TMEM57Q8N5G2 664 aa23.27■■□□□ 1.32
FOXRED1-215ENST00000533395 RPS12P25398 132 aaKnown RBP23.26■■□□□ 1.31
FOXRED1-215ENST00000533395 TBC1D10BQ4KMP7 808 aaPredicted RBP23.26■■□□□ 1.31
FOXRED1-215ENST00000533395 CNTROBQ8N137 903 aa23.26■■□□□ 1.31
FOXRED1-215ENST00000533395 DPF2Q92785 391 aa23.26■■□□□ 1.31
FOXRED1-215ENST00000533395 ADAMTSL1Q8N6G6 1762 aa23.26■■□□□ 1.31
FOXRED1-215ENST00000533395 RSBN1LQ6PCB5 846 aaPredicted RBP23.25■■□□□ 1.31
FOXRED1-215ENST00000533395 SAMD7Q7Z3H4 446 aa23.25■■□□□ 1.31
FOXRED1-215ENST00000533395 TRPM4Q8TD43 1214 aa23.25■■□□□ 1.31
FOXRED1-215ENST00000533395 MXD3Q9BW11 206 aa23.25■■□□□ 1.31
FOXRED1-215ENST00000533395 SIL1Q9H173 461 aa23.25■■□□□ 1.31
FOXRED1-215ENST00000533395 RIPOR2Q9Y4F9 1068 aa23.25■■□□□ 1.31
FOXRED1-215ENST00000533395 MROH5Q6ZUA9 1318 aa23.25■■□□□ 1.31
FOXRED1-215ENST00000533395 YTHDC1Q96MU7 727 aaKnown RBP23.24■■□□□ 1.31
FOXRED1-215ENST00000533395 CEP350Q5VT06 3117 aa23.24■■□□□ 1.31
FOXRED1-215ENST00000533395 PSME4Q14997 1843 aa23.24■■□□□ 1.31
FOXRED1-215ENST00000533395 GTF2IP78347 998 aa23.23■■□□□ 1.31
FOXRED1-215ENST00000533395 ZNF804AQ7Z570 1209 aa23.23■■□□□ 1.31
FOXRED1-215ENST00000533395 DZIP1LQ8IYY4 767 aaKnown RBP23.23■■□□□ 1.31
FOXRED1-215ENST00000533395 CD209Q9NNX6 404 aa23.23■■□□□ 1.31
FOXRED1-215ENST00000533395 EGFRP00533 1210 aa23.22■■□□□ 1.31
FOXRED1-215ENST00000533395 RFX5P48382 616 aaPredicted RBP23.22■■□□□ 1.31
FOXRED1-215ENST00000533395 HIRAP54198 1017 aaPredicted RBP23.22■■□□□ 1.31
FOXRED1-215ENST00000533395 TTLL5Q6EMB2 1281 aa23.22■■□□□ 1.31
FOXRED1-215ENST00000533395 ITPRIPQ8IWB1 547 aa23.22■■□□□ 1.31
FOXRED1-215ENST00000533395 ITGBL1O95965 494 aaPredicted RBP23.21■■□□□ 1.31
FOXRED1-215ENST00000533395 PTPN12Q05209 780 aaKnown RBP23.21■■□□□ 1.31
FOXRED1-215ENST00000533395 UBE4AQ14139 1066 aa23.21■■□□□ 1.31
FOXRED1-215ENST00000533395 AGBL3Q8NEM8 1001 aa23.21■■□□□ 1.31
FOXRED1-215ENST00000533395 JAG2Q9Y219 1238 aa23.21■■□□□ 1.31
FOXRED1-215ENST00000533395 IRS2Q9Y4H2 1338 aa23.2■■□□□ 1.3
FOXRED1-215ENST00000533395 GNAI2P04899 355 aa23.2■■□□□ 1.3
FOXRED1-215ENST00000533395 RLBP1P12271 317 aa23.2■■□□□ 1.3
FOXRED1-215ENST00000533395 GYG1P46976 350 aa23.2■■□□□ 1.3
FOXRED1-215ENST00000533395 DACT2Q5SW24 774 aa23.2■■□□□ 1.3
FOXRED1-215ENST00000533395 PA2G4Q9UQ80 394 aaKnown RBP23.2■■□□□ 1.3
FOXRED1-215ENST00000533395 EYA2O00167 538 aa23.19■■□□□ 1.3
FOXRED1-215ENST00000533395 SRGAP3O43295 1099 aa23.19■■□□□ 1.3
FOXRED1-215ENST00000533395 USP17L8P0C7I0 530 aa23.19■■□□□ 1.3
FOXRED1-215ENST00000533395 FMR1Q06787 632 aaKnown RBP eCLIP23.19■■□□□ 1.3
FOXRED1-215ENST00000533395 KIF4BQ2VIQ3 1234 aa23.19■■□□□ 1.3
FOXRED1-215ENST00000533395 STRIP1Q5VSL9 837 aa23.19■■□□□ 1.3
FOXRED1-215ENST00000533395 C15orf52Q6ZUT6 534 aaKnown RBP23.19■■□□□ 1.3
FOXRED1-215ENST00000533395 RCAN3Q9UKA8 241 aa23.19■■□□□ 1.3
FOXRED1-215ENST00000533395 PASKQ96RG2 1323 aa23.18■■□□□ 1.3
FOXRED1-215ENST00000533395 TRAF5O00463 557 aa23.18■■□□□ 1.3
FOXRED1-215ENST00000533395 PDE8BO95263 885 aa23.18■■□□□ 1.3
FOXRED1-215ENST00000533395 VPS37DQ86XT2 251 aa23.18■■□□□ 1.3
FOXRED1-215ENST00000533395 HIBADHP31937 336 aaKnown RBP23.17■■□□□ 1.3
FOXRED1-215ENST00000533395 PANK1Q8TE04 598 aa23.17■■□□□ 1.3
FOXRED1-215ENST00000533395 GMLQ99445 158 aa23.17■■□□□ 1.3
FOXRED1-215ENST00000533395 GLIS2Q9BZE0 524 aaPredicted RBP23.17■■□□□ 1.3
FOXRED1-215ENST00000533395 ATG9AQ7Z3C6 839 aa23.16■■□□□ 1.3
FOXRED1-215ENST00000533395 KIAA0825Q8IV33 1275 aa23.16■■□□□ 1.3
FOXRED1-215ENST00000533395 VGLL2Q8N8G2 317 aa23.16■■□□□ 1.3
FOXRED1-215ENST00000533395 C1orf115Q9H7X2 142 aa23.16■■□□□ 1.3
FOXRED1-215ENST00000533395 IQSEC3Q9UPP2 1182 aaPredicted RBP23.16■■□□□ 1.3
FOXRED1-215ENST00000533395 ZNF646O15015 1829 aaPredicted RBP23.15■■□□□ 1.3
FOXRED1-215ENST00000533395 MYO3BQ8WXR4 1341 aa23.15■■□□□ 1.3
FOXRED1-215ENST00000533395 FRAT2O75474 233 aaPredicted RBP23.15■■□□□ 1.3
FOXRED1-215ENST00000533395 IL1R1P14778 569 aa23.15■■□□□ 1.3
FOXRED1-215ENST00000533395 PUM3Q15397 648 aaKnown RBP23.15■■□□□ 1.3
FOXRED1-215ENST00000533395 CAVIN4Q5BKX8 364 aa23.15■■□□□ 1.3
FOXRED1-215ENST00000533395 OGFOD1Q8N543 542 aa23.15■■□□□ 1.3
FOXRED1-215ENST00000533395 ZC3H15Q8WU90 426 aaKnown RBP23.15■■□□□ 1.3
FOXRED1-215ENST00000533395 FAM84BQ96KN1 310 aaPredicted RBP23.15■■□□□ 1.3
FOXRED1-215ENST00000533395 ZNF408Q9H9D4 720 aa23.15■■□□□ 1.3
FOXRED1-215ENST00000533395 MYOZ2Q9NPC6 264 aa23.15■■□□□ 1.3
FOXRED1-215ENST00000533395 TMEM88BA6NKF7 163 aa23.14■■□□□ 1.29
FOXRED1-215ENST00000533395 F8W031 263 aaPredicted RBP23.14■■□□□ 1.29
FOXRED1-215ENST00000533395 ZNF280AP59817 542 aaPredicted RBP23.14■■□□□ 1.29
FOXRED1-215ENST00000533395 USP48Q86UV5 1035 aa23.14■■□□□ 1.29
FOXRED1-215ENST00000533395 DCPSQ96C86 337 aaKnown RBP23.14■■□□□ 1.29
FOXRED1-215ENST00000533395 CREBZFQ9NS37 354 aa23.14■■□□□ 1.29
FOXRED1-215ENST00000533395 CEP126Q9P2H0 1117 aa23.14■■□□□ 1.29
FOXRED1-215ENST00000533395 ASTN2O75129 1339 aaPredicted RBP23.13■■□□□ 1.29
FOXRED1-215ENST00000533395 IFIT1P09914 478 aaKnown RBP23.13■■□□□ 1.29
FOXRED1-215ENST00000533395 SCARF1Q14162 830 aa23.13■■□□□ 1.29
FOXRED1-215ENST00000533395 DNAJC5GQ8N7S2 189 aa23.13■■□□□ 1.29
FOXRED1-215ENST00000533395 ZNF609O15014 1411 aa23.12■■□□□ 1.29
FOXRED1-215ENST00000533395 CIAO1O76071 339 aa23.12■■□□□ 1.29
FOXRED1-215ENST00000533395 SLC5A1P13866 664 aa23.12■■□□□ 1.29
FOXRED1-215ENST00000533395 CHAF1AQ13111 956 aaPredicted RBP23.12■■□□□ 1.29
FOXRED1-215ENST00000533395 DLK2Q6UY11 383 aa23.12■■□□□ 1.29
FOXRED1-215ENST00000533395 CDC37L1Q7L3B6 337 aa23.12■■□□□ 1.29
FOXRED1-215ENST00000533395 GGA3Q9NZ52 723 aa23.12■■□□□ 1.29
FOXRED1-215ENST00000533395 MKRN1Q9UHC7 482 aaKnown RBP23.12■■□□□ 1.29
FOXRED1-215ENST00000533395 PGAP2Q9UHJ9 254 aa23.12■■□□□ 1.29
FOXRED1-215ENST00000533395 HDAC9Q9UKV0 1011 aa23.12■■□□□ 1.29
FOXRED1-215ENST00000533395 ABT1Q9ULW3 272 aaKnown RBP23.12■■□□□ 1.29
FOXRED1-215ENST00000533395 PNMA6EA0A0J9YXQ4 647 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms