RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 CCDC194A0A1B0GVG4 234 aa14.08□□□□□ -0.16
BDNF-218ENST00000533246 GIGYF1O75420 1035 aaPredicted RBP14.08□□□□□ -0.16
BDNF-218ENST00000533246 PTGS1P23219 599 aa14.08□□□□□ -0.16
BDNF-218ENST00000533246 TTF1Q15361 905 aaPredicted RBP14.08□□□□□ -0.16
BDNF-218ENST00000533246 PSMD1Q99460 953 aa14.08□□□□□ -0.16
BDNF-218ENST00000533246 RNF113AO15541 343 aaKnown RBP14.08□□□□□ -0.16
BDNF-218ENST00000533246 CCP110O43303 1012 aa14.07□□□□□ -0.16
BDNF-218ENST00000533246 SKILP12757 684 aa14.07□□□□□ -0.16
BDNF-218ENST00000533246 NBPF5PQ86XG9 351 aaPredicted RBP14.07□□□□□ -0.16
BDNF-218ENST00000533246 DNAJC10Q8IXB1 793 aa14.07□□□□□ -0.16
BDNF-218ENST00000533246 BTG4Q9NY30 223 aa14.07□□□□□ -0.16
BDNF-218ENST00000533246 CEP131Q9UPN4 1083 aa14.07□□□□□ -0.16
BDNF-218ENST00000533246 ERBB4Q15303 1308 aa14.07□□□□□ -0.16
BDNF-218ENST00000533246 F8W031 263 aaPredicted RBP14.07□□□□□ -0.16
BDNF-218ENST00000533246 PRIMPOLQ96LW4 560 aa14.07□□□□□ -0.16
BDNF-218ENST00000533246 SAMD9LQ8IVG5 1584 aa14.07□□□□□ -0.16
BDNF-218ENST00000533246 RDXP35241 583 aaKnown RBP14.07□□□□□ -0.16
BDNF-218ENST00000533246 MAGEB6Q8N7X4 407 aa14.07□□□□□ -0.16
BDNF-218ENST00000533246 MRPS27Q92552 414 aaKnown RBP14.07□□□□□ -0.16
BDNF-218ENST00000533246 PHF23Q9BUL5 403 aaPredicted RBP14.07□□□□□ -0.16
BDNF-218ENST00000533246 TMEM2Q9UHN6 1383 aa14.07□□□□□ -0.16
BDNF-218ENST00000533246 KIF4BQ2VIQ3 1234 aa14.06□□□□□ -0.16
BDNF-218ENST00000533246 RASEFQ8IZ41 740 aa14.06□□□□□ -0.16
BDNF-218ENST00000533246 GIMAP7Q8NHV1 300 aa14.06□□□□□ -0.16
BDNF-218ENST00000533246 EYA2O00167 538 aa14.06□□□□□ -0.16
BDNF-218ENST00000533246 TAF5LO75529 589 aa14.06□□□□□ -0.16
BDNF-218ENST00000533246 ZFYP08048 801 aaPredicted RBP14.06□□□□□ -0.16
BDNF-218ENST00000533246 IBSPP21815 317 aaPredicted RBP14.06□□□□□ -0.16
BDNF-218ENST00000533246 SPTLC2O15270 562 aa14.06□□□□□ -0.16
BDNF-218ENST00000533246 POLR3GO15318 223 aaPredicted RBP14.06□□□□□ -0.16
BDNF-218ENST00000533246 SSH3Q8TE77 659 aa14.06□□□□□ -0.16
BDNF-218ENST00000533246 MYL10Q9BUA6 226 aa14.06□□□□□ -0.16
BDNF-218ENST00000533246 RAD50Q92878 1312 aa14.06□□□□□ -0.16
BDNF-218ENST00000533246 PRDM1O75626 825 aa14.06□□□□□ -0.16
BDNF-218ENST00000533246 CCDC96Q2M329 555 aa14.06□□□□□ -0.16
BDNF-218ENST00000533246 CRACR2BQ8N4Y2 399 aaPredicted RBP14.06□□□□□ -0.16
BDNF-218ENST00000533246 B4E1Z4 1266 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 H0YHG0 523 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 SARNPP82979 210 aaKnown RBP14.05□□□□□ -0.16
BDNF-218ENST00000533246 DDB1Q16531 1140 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 SLC52A2Q9HAB3 445 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 BMP2KQ9NSY1 1161 aaPredicted RBP14.05□□□□□ -0.16
BDNF-218ENST00000533246 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.05□□□□□ -0.16
BDNF-218ENST00000533246 STX17P56962 302 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 UVSSAQ2YD98 709 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 CCDC152Q4G0S7 254 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 LEKR1Q6ZMV7 388 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 TTLL7Q6ZT98 887 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 KIAA1328Q86T90 577 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 ANKRD18AQ8IVF6 992 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 KRT222Q8N1A0 295 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 A0A0D9SFI3 127 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 UQCRFS1P1P0C7P4 283 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 HSPA4P34932 840 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 ZNF76P36508 570 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 UBA7P41226 1012 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 UBASH3AP57075 661 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 RTN1Q16799 776 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 CDC37L1Q7L3B6 337 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 CENPHQ9H3R5 247 aa14.05□□□□□ -0.16
BDNF-218ENST00000533246 SEC63Q9UGP8 760 aaKnown RBP14.05□□□□□ -0.16
BDNF-218ENST00000533246 RPS6KB1P23443 525 aa14.04□□□□□ -0.16
BDNF-218ENST00000533246 UBA5Q9GZZ9 404 aa14.04□□□□□ -0.16
BDNF-218ENST00000533246 RNF216Q9NWF9 866 aaPredicted RBP14.04□□□□□ -0.16
BDNF-218ENST00000533246 ME3Q16798 604 aa14.04□□□□□ -0.16
BDNF-218ENST00000533246 SEPT11Q9NVA2 429 aaKnown RBP14.04□□□□□ -0.16
BDNF-218ENST00000533246 PLBD2Q8NHP8 589 aa14.04□□□□□ -0.16
BDNF-218ENST00000533246 RPGRQ92834 1020 aaKnown RBP14.04□□□□□ -0.16
BDNF-218ENST00000533246 OGFRQ9NZT2 677 aa14.04□□□□□ -0.16
BDNF-218ENST00000533246 ADCK5Q3MIX3 580 aa14.03□□□□□ -0.16
BDNF-218ENST00000533246 SPECC1Q5M775 1068 aa14.03□□□□□ -0.16
BDNF-218ENST00000533246 BEND3Q5T5X7 828 aa14.03□□□□□ -0.16
BDNF-218ENST00000533246 CCDC181Q5TID7 509 aa14.03□□□□□ -0.16
BDNF-218ENST00000533246 NUP88Q99567 741 aaPredicted RBP14.03□□□□□ -0.16
BDNF-218ENST00000533246 ABCA8O94911 1581 aa14.03□□□□□ -0.16
BDNF-218ENST00000533246 ITGA6P23229 1130 aa14.03□□□□□ -0.16
BDNF-218ENST00000533246 NAA16Q6N069 864 aaPredicted RBP14.03□□□□□ -0.16
BDNF-218ENST00000533246 ACBD3Q9H3P7 528 aa14.03□□□□□ -0.16
BDNF-218ENST00000533246 TRPM2O94759 1503 aa14.03□□□□□ -0.16
BDNF-218ENST00000533246 MBD4O95243 580 aa14.03□□□□□ -0.16
BDNF-218ENST00000533246 MNAT1P51948 309 aa14.03□□□□□ -0.16
BDNF-218ENST00000533246 XAGE2Q96GT9 111 aa14.03□□□□□ -0.16
BDNF-218ENST00000533246 AK7Q96M32 723 aa14.03□□□□□ -0.16
BDNF-218ENST00000533246 C8orf37Q96NL8 207 aa14.03□□□□□ -0.16
BDNF-218ENST00000533246 hCG_1642624A0A1W2PR95 340 aa14.02□□□□□ -0.16
BDNF-218ENST00000533246 GNG11P61952 73 aa14.02□□□□□ -0.16
BDNF-218ENST00000533246 IFIT1BQ5T764 474 aaKnown RBP14.02□□□□□ -0.16
BDNF-218ENST00000533246 CCDC102AQ96A19 550 aa14.02□□□□□ -0.16
BDNF-218ENST00000533246 DHX58Q96C10 678 aa14.02□□□□□ -0.16
BDNF-218ENST00000533246 FEZ1Q99689 392 aa14.02□□□□□ -0.16
BDNF-218ENST00000533246 TLR7Q9NYK1 1049 aaKnown RBP14.02□□□□□ -0.16
BDNF-218ENST00000533246 NSFL1CQ9UNZ2 370 aaKnown RBP14.02□□□□□ -0.16
BDNF-218ENST00000533246 NEURL1BA8MQ27 555 aa14.02□□□□□ -0.17
BDNF-218ENST00000533246 RFC4P35249 363 aa14.02□□□□□ -0.17
BDNF-218ENST00000533246 KCNG4Q8TDN1 519 aa14.02□□□□□ -0.17
BDNF-218ENST00000533246 NLRP3Q96P20 1036 aa14.02□□□□□ -0.17
BDNF-218ENST00000533246 PLIN2Q99541 437 aa14.02□□□□□ -0.17
BDNF-218ENST00000533246 ROBO2Q9HCK4 1378 aa14.02□□□□□ -0.17
BDNF-218ENST00000533246 SNW1Q13573 536 aaKnown RBP14.02□□□□□ -0.17
BDNF-218ENST00000533246 ESR2Q92731 530 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms