RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 JAK2O60674 1132 aa17.3■□□□□ 0.36
CAPN1-224ENST00000533129 GSDMDP57764 484 aa17.3■□□□□ 0.36
CAPN1-224ENST00000533129 IFFO2Q5TF58 517 aa17.3■□□□□ 0.36
CAPN1-224ENST00000533129 ZNF496Q96IT1 587 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-224ENST00000533129 SNRPA1P09661 255 aaKnown RBP17.3■□□□□ 0.36
CAPN1-224ENST00000533129 USPL1Q5W0Q7 1092 aa17.3■□□□□ 0.36
CAPN1-224ENST00000533129 ELF2Q15723 593 aa17.29■□□□□ 0.36
CAPN1-224ENST00000533129 DHX40Q8IX18 779 aaKnown RBP17.29■□□□□ 0.36
CAPN1-224ENST00000533129 EAF2Q96CJ1 260 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-224ENST00000533129 ANO10Q9NW15 660 aa17.29■□□□□ 0.36
CAPN1-224ENST00000533129 USP16Q9Y5T5 823 aa17.29■□□□□ 0.36
CAPN1-224ENST00000533129 SASH1O94885 1247 aa17.29■□□□□ 0.36
CAPN1-224ENST00000533129 RCOR1Q9UKL0 485 aa17.29■□□□□ 0.36
CAPN1-224ENST00000533129 ANXA1P04083 346 aa17.28■□□□□ 0.36
CAPN1-224ENST00000533129 PIP4K2BP78356 416 aa17.28■□□□□ 0.36
CAPN1-224ENST00000533129 PAPPAQ13219 1627 aa17.28■□□□□ 0.36
CAPN1-224ENST00000533129 FILIP1Q7Z7B0 1213 aa17.28■□□□□ 0.36
CAPN1-224ENST00000533129 CCAR1Q8IX12 1150 aaKnown RBP17.28■□□□□ 0.36
CAPN1-224ENST00000533129 OSBPL5Q9H0X9 879 aaPredicted RBP17.28■□□□□ 0.36
CAPN1-224ENST00000533129 GLI3P10071 1580 aa17.28■□□□□ 0.36
CAPN1-224ENST00000533129 TAF5LO75529 589 aa17.28■□□□□ 0.36
CAPN1-224ENST00000533129 ADD1P35611 737 aaKnown RBP17.28■□□□□ 0.36
CAPN1-224ENST00000533129 PROSER3Q2NL68 480 aa17.28■□□□□ 0.36
CAPN1-224ENST00000533129 CCDC73Q6ZRK6 1079 aa17.28■□□□□ 0.36
CAPN1-224ENST00000533129 IMPACTQ9P2X3 320 aa17.28■□□□□ 0.36
CAPN1-224ENST00000533129 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.28■□□□□ 0.36
CAPN1-224ENST00000533129 V9GYY5 206 aaPredicted RBP17.28■□□□□ 0.36
CAPN1-224ENST00000533129 LAMB4A4D0S4 1761 aa17.27■□□□□ 0.36
CAPN1-224ENST00000533129 DDX58O95786 925 aaKnown RBP17.27■□□□□ 0.36
CAPN1-224ENST00000533129 G3BP1Q13283 466 aaKnown RBP eCLIP17.27■□□□□ 0.363e-6■■■□□ 16
CAPN1-224ENST00000533129 ATL3Q6DD88 541 aa17.27■□□□□ 0.36
CAPN1-224ENST00000533129 NAA16Q6N069 864 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-224ENST00000533129 ZNF589Q86UQ0 364 aaPredicted RBP17.27■□□□□ 0.36
CAPN1-224ENST00000533129 CEP57L1Q8IYX8 460 aa17.27■□□□□ 0.36
CAPN1-224ENST00000533129 SMARCC2Q8TAQ2 1214 aa17.27■□□□□ 0.36
CAPN1-224ENST00000533129 LLPHQ9BRT6 129 aaKnown RBP17.27■□□□□ 0.36
CAPN1-224ENST00000533129 L2HGDHQ9H9P8 463 aa17.27■□□□□ 0.36
CAPN1-224ENST00000533129 MAP3K2Q9Y2U5 619 aa17.27■□□□□ 0.36
CAPN1-224ENST00000533129 SNW1Q13573 536 aaKnown RBP17.27■□□□□ 0.35
CAPN1-224ENST00000533129 PDIA6Q15084 440 aa17.27■□□□□ 0.35
CAPN1-224ENST00000533129 KSR2Q6VAB6 950 aa17.27■□□□□ 0.35
CAPN1-224ENST00000533129 NEK1Q96PY6 1258 aa17.27■□□□□ 0.35
CAPN1-224ENST00000533129 CCDC8Q9H0W5 538 aaPredicted RBP17.27■□□□□ 0.35
CAPN1-224ENST00000533129 TRMT1Q9NXH9 659 aaKnown RBP17.27■□□□□ 0.35
CAPN1-224ENST00000533129 UBR2Q8IWV8 1755 aa17.26■□□□□ 0.35
CAPN1-224ENST00000533129 WNK3Q9BYP7 1800 aa17.26■□□□□ 0.35
CAPN1-224ENST00000533129 KINO60870 393 aaKnown RBP17.26■□□□□ 0.35
CAPN1-224ENST00000533129 NRAPQ86VF7 1730 aa17.26■□□□□ 0.35
CAPN1-224ENST00000533129 NAT10Q9H0A0 1025 aaKnown RBP17.26■□□□□ 0.35
CAPN1-224ENST00000533129 H2AFXP16104 143 aaPredicted RBP17.26■□□□□ 0.35
CAPN1-224ENST00000533129 FAM160A1Q05DH4 1040 aa17.26■□□□□ 0.35
CAPN1-224ENST00000533129 DDX11Q96FC9 970 aa17.26■□□□□ 0.35
CAPN1-224ENST00000533129 BOLA2Q9H3K6 86 aa17.26■□□□□ 0.35
CAPN1-224ENST00000533129 GOLPH3LQ9H4A5 285 aa17.26■□□□□ 0.35
CAPN1-224ENST00000533129 UTYO14607 1347 aa17.26■□□□□ 0.35
CAPN1-224ENST00000533129 KCNJ6P48051 423 aa17.25■□□□□ 0.35
CAPN1-224ENST00000533129 ENGASEQ8NFI3 743 aa17.25■□□□□ 0.35
CAPN1-224ENST00000533129 TLR7Q9NYK1 1049 aaKnown RBP17.25■□□□□ 0.35
CAPN1-224ENST00000533129 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.25■□□□□ 0.35
CAPN1-224ENST00000533129 TOGARAM1Q9Y4F4 1720 aa17.25■□□□□ 0.35
CAPN1-224ENST00000533129 UBAP1LF5GYI3 381 aa17.25■□□□□ 0.35
CAPN1-224ENST00000533129 TUBB4AP04350 444 aa17.25■□□□□ 0.35
CAPN1-224ENST00000533129 FGD1P98174 961 aa17.25■□□□□ 0.35
CAPN1-224ENST00000533129 BMS1Q14692 1282 aaKnown RBP17.25■□□□□ 0.35
CAPN1-224ENST00000533129 Q6ZUG5 572 aa17.25■□□□□ 0.35
CAPN1-224ENST00000533129 ZNF446Q9NWS9 450 aa17.25■□□□□ 0.35
CAPN1-224ENST00000533129 RFX7Q2KHR2 1363 aa17.25■□□□□ 0.35
CAPN1-224ENST00000533129 TNS2Q63HR2 1409 aa17.25■□□□□ 0.35
CAPN1-224ENST00000533129 ADAMTS2O95450 1211 aa17.24■□□□□ 0.35
CAPN1-224ENST00000533129 DHX8Q14562 1220 aaKnown RBP17.24■□□□□ 0.35
CAPN1-224ENST00000533129 KCPQ6ZWJ8 1503 aa17.24■□□□□ 0.35
CAPN1-224ENST00000533129 HSP90B1P14625 803 aaKnown RBP17.24■□□□□ 0.35
CAPN1-224ENST00000533129 LRP6O75581 1613 aa17.24■□□□□ 0.35
CAPN1-224ENST00000533129 PSDA5PKW4 1024 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-224ENST00000533129 GRM8O00222 908 aa17.23■□□□□ 0.35
CAPN1-224ENST00000533129 NBPF11Q86T75 865 aa17.23■□□□□ 0.35
CAPN1-224ENST00000533129 AOPEPQ8N6M6 819 aa17.23■□□□□ 0.35
CAPN1-224ENST00000533129 CCDC150Q8NCX0 1101 aa17.23■□□□□ 0.35
CAPN1-224ENST00000533129 SUCLG2Q96I99 432 aa17.23■□□□□ 0.35
CAPN1-224ENST00000533129 ZNF396Q96N95 335 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-224ENST00000533129 CDCA7Q9BWT1 371 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-224ENST00000533129 BCL11BQ9C0K0 894 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-224ENST00000533129 TMEM51Q9NW97 253 aa17.23■□□□□ 0.35
CAPN1-224ENST00000533129 U3KPZ7 1027 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-224ENST00000533129 PFKFB2O60825 505 aa17.23■□□□□ 0.35
CAPN1-224ENST00000533129 CEBPZQ03701 1054 aaKnown RBP17.23■□□□□ 0.35
CAPN1-224ENST00000533129 SCRN1Q12765 414 aa17.23■□□□□ 0.35
CAPN1-224ENST00000533129 KAZALD1Q96I82 304 aa17.23■□□□□ 0.35
CAPN1-224ENST00000533129 TIGD1Q96MW7 591 aa17.23■□□□□ 0.35
CAPN1-224ENST00000533129 NWD2Q9ULI1 1742 aa17.23■□□□□ 0.35
CAPN1-224ENST00000533129 CWF19L2Q2TBE0 894 aaKnown RBP17.23■□□□□ 0.35
CAPN1-224ENST00000533129 CCDC93Q567U6 631 aa17.23■□□□□ 0.35
CAPN1-224ENST00000533129 E4F1Q66K89 784 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-224ENST00000533129 LINS1Q8NG48 757 aa17.23■□□□□ 0.35
CAPN1-224ENST00000533129 CALCOCO1Q9P1Z2 691 aa17.23■□□□□ 0.35
CAPN1-224ENST00000533129 THRAP3Q9Y2W1 955 aaKnown RBP17.23■□□□□ 0.35
CAPN1-224ENST00000533129 LAMA4Q16363 1823 aa17.22■□□□□ 0.35
CAPN1-224ENST00000533129 COL15A1P39059 1388 aa17.22■□□□□ 0.35
CAPN1-224ENST00000533129 PPP1R13BQ96KQ4 1090 aa17.22■□□□□ 0.35
CAPN1-224ENST00000533129 BICC1Q9H694 974 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms