RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 NUP133Q8WUM0 1156 aa13.17□□□□□ -0.3
NXF1-211ENST00000531709 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.17□□□□□ -0.34e-7■■■■□ 25.1
NXF1-211ENST00000531709 TBC1D2BQ9UPU7 963 aa13.17□□□□□ -0.3
NXF1-211ENST00000531709 RNF113AO15541 343 aaKnown RBP13.16□□□□□ -0.3
NXF1-211ENST00000531709 ATP2B3Q16720 1220 aa13.16□□□□□ -0.3
NXF1-211ENST00000531709 UBXN4Q92575 508 aa13.16□□□□□ -0.3
NXF1-211ENST00000531709 PRDM11Q9NQV5 511 aa13.16□□□□□ -0.3
NXF1-211ENST00000531709 ARGLU1Q9NWB6 273 aaPredicted RBP13.16□□□□□ -0.3
NXF1-211ENST00000531709 AXIN2Q9Y2T1 843 aa13.16□□□□□ -0.3
NXF1-211ENST00000531709 ADAMTS13Q76LX8 1427 aa13.16□□□□□ -0.3
NXF1-211ENST00000531709 A1BGP04217 495 aa13.16□□□□□ -0.3
NXF1-211ENST00000531709 GSDMDP57764 484 aa13.16□□□□□ -0.3
NXF1-211ENST00000531709 PTPN12Q05209 780 aaKnown RBP13.16□□□□□ -0.3
NXF1-211ENST00000531709 SYT10Q6XYQ8 523 aa13.16□□□□□ -0.3
NXF1-211ENST00000531709 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.16□□□□□ -0.3
NXF1-211ENST00000531709 RASSF8Q8NHQ8 419 aa13.16□□□□□ -0.3
NXF1-211ENST00000531709 NRKQ7Z2Y5 1582 aa13.16□□□□□ -0.3
NXF1-211ENST00000531709 IL15P40933 162 aaPredicted RBP13.16□□□□□ -0.3
NXF1-211ENST00000531709 ST3GAL1Q11201 340 aa13.16□□□□□ -0.3
NXF1-211ENST00000531709 LRRC8AQ8IWT6 810 aa13.16□□□□□ -0.3
NXF1-211ENST00000531709 GPHNQ9NQX3 736 aaPredicted RBP13.16□□□□□ -0.3
NXF1-211ENST00000531709 IFIT5Q13325 482 aaKnown RBP13.15□□□□□ -0.3
NXF1-211ENST00000531709 CCDC34Q96HJ3 373 aa13.15□□□□□ -0.3
NXF1-211ENST00000531709 SPTLC3Q9NUV7 552 aa13.15□□□□□ -0.3
NXF1-211ENST00000531709 DNAI1Q9UI46 699 aa13.15□□□□□ -0.3
NXF1-211ENST00000531709 HOOK1Q9UJC3 728 aaKnown RBP13.15□□□□□ -0.3
NXF1-211ENST00000531709 ANKRD26Q9UPS8 1709 aa13.15□□□□□ -0.3
NXF1-211ENST00000531709 SYKP43405 635 aa13.15□□□□□ -0.3
NXF1-211ENST00000531709 CCDC144BQ3MJ40 725 aa13.15□□□□□ -0.3
NXF1-211ENST00000531709 TDRD7Q8NHU6 1098 aaKnown RBP13.15□□□□□ -0.3
NXF1-211ENST00000531709 NCOA7Q8NI08 942 aa13.15□□□□□ -0.3
NXF1-211ENST00000531709 DLG5Q8TDM6 1919 aa13.15□□□□□ -0.3
NXF1-211ENST00000531709 ERICH2A1L162 156 aa13.15□□□□□ -0.3
NXF1-211ENST00000531709 RESTQ13127 1097 aa13.15□□□□□ -0.3
NXF1-211ENST00000531709 LRRC24Q50LG9 513 aa13.15□□□□□ -0.3
NXF1-211ENST00000531709 KIF6Q6ZMV9 814 aa13.15□□□□□ -0.3
NXF1-211ENST00000531709 ARHGEF25Q86VW2 580 aa13.15□□□□□ -0.3
NXF1-211ENST00000531709 COPRSQ9NQ92 184 aa13.15□□□□□ -0.3
NXF1-211ENST00000531709 ZNF215Q9UL58 517 aaPredicted RBP13.15□□□□□ -0.3
NXF1-211ENST00000531709 HSPD1P10809 573 aaKnown RBP13.15□□□□□ -0.31
NXF1-211ENST00000531709 TOP1P11387 765 aaKnown RBP13.15□□□□□ -0.31
NXF1-211ENST00000531709 LDHAL6AQ6ZMR3 332 aa13.15□□□□□ -0.31
NXF1-211ENST00000531709 CNNM3Q8NE01 707 aa13.15□□□□□ -0.31
NXF1-211ENST00000531709 NSUN7Q8NE18 718 aaKnown RBP13.15□□□□□ -0.31
NXF1-211ENST00000531709 KCNG4Q8TDN1 519 aa13.15□□□□□ -0.31
NXF1-211ENST00000531709 GJB4Q9NTQ9 266 aa13.15□□□□□ -0.31
NXF1-211ENST00000531709 UBASH3AP57075 661 aa13.14□□□□□ -0.31
NXF1-211ENST00000531709 ELF2Q15723 593 aa13.14□□□□□ -0.31
NXF1-211ENST00000531709 AIDAQ96BJ3 306 aa13.14□□□□□ -0.31
NXF1-211ENST00000531709 ALG1Q9BT22 464 aa13.14□□□□□ -0.31
NXF1-211ENST00000531709 METAP2P50579 478 aaKnown RBP eCLIP13.14□□□□□ -0.31
NXF1-211ENST00000531709 PTPN21Q16825 1174 aa13.14□□□□□ -0.31
NXF1-211ENST00000531709 ZNF710Q8N1W2 664 aa13.14□□□□□ -0.31
NXF1-211ENST00000531709 HAUS7Q99871 368 aa13.14□□□□□ -0.31
NXF1-211ENST00000531709 LLPHQ9BRT6 129 aaKnown RBP13.14□□□□□ -0.31
NXF1-211ENST00000531709 FUCA2Q9BTY2 467 aa13.14□□□□□ -0.31
NXF1-211ENST00000531709 PCDHA7Q9UN72 937 aa13.14□□□□□ -0.31
NXF1-211ENST00000531709 AKAP2Q9Y2D5 859 aa13.14□□□□□ -0.31
NXF1-211ENST00000531709 PFKFB2O60825 505 aa13.14□□□□□ -0.31
NXF1-211ENST00000531709 KLHL10Q6JEL2 608 aa13.14□□□□□ -0.31
NXF1-211ENST00000531709 TTLL7Q6ZT98 887 aa13.14□□□□□ -0.31
NXF1-211ENST00000531709 KAZALD1Q96I82 304 aa13.14□□□□□ -0.31
NXF1-211ENST00000531709 NAA16Q6N069 864 aaPredicted RBP13.13□□□□□ -0.31
NXF1-211ENST00000531709 FAM89AQ96GI7 184 aa13.13□□□□□ -0.31
NXF1-211ENST00000531709 HELLSQ9NRZ9 838 aa13.13□□□□□ -0.31
NXF1-211ENST00000531709 KAT6BQ8WYB5 2073 aa13.13□□□□□ -0.31
NXF1-211ENST00000531709 SLU7O95391 586 aaKnown RBP13.13□□□□□ -0.31
NXF1-211ENST00000531709 NDUFA8P51970 172 aa13.13□□□□□ -0.31
NXF1-211ENST00000531709 XPO4Q9C0E2 1151 aaKnown RBP13.13□□□□□ -0.31
NXF1-211ENST00000531709 PTPRUQ92729 1446 aa13.13□□□□□ -0.31
NXF1-211ENST00000531709 POLR3GO15318 223 aaPredicted RBP13.13□□□□□ -0.31
NXF1-211ENST00000531709 PDIA3P30101 505 aaKnown RBP13.13□□□□□ -0.31
NXF1-211ENST00000531709 SLC9C2Q5TAH2 1124 aa13.13□□□□□ -0.31
NXF1-211ENST00000531709 CPLX3Q8WVH0 158 aa13.13□□□□□ -0.31
NXF1-211ENST00000531709 EYA2O00167 538 aa13.12□□□□□ -0.31
NXF1-211ENST00000531709 SPECC1Q5M775 1068 aa13.12□□□□□ -0.31
NXF1-211ENST00000531709 PUS3Q9BZE2 481 aaKnown RBP13.12□□□□□ -0.31
NXF1-211ENST00000531709 ZSWIM4Q9H7M6 989 aa13.12□□□□□ -0.31
NXF1-211ENST00000531709 CLIC4Q9Y696 253 aa13.12□□□□□ -0.31
NXF1-211ENST00000531709 KIF2AO00139 706 aaPredicted RBP13.12□□□□□ -0.31
NXF1-211ENST00000531709 CDKL5O76039 1030 aa13.12□□□□□ -0.31
NXF1-211ENST00000531709 IARSP41252 1262 aaKnown RBP13.12□□□□□ -0.31
NXF1-211ENST00000531709 PLBD2Q8NHP8 589 aa13.12□□□□□ -0.31
NXF1-211ENST00000531709 DCAF5Q96JK2 942 aa13.12□□□□□ -0.31
NXF1-211ENST00000531709 TRERF1Q96PN7 1200 aa13.12□□□□□ -0.31
NXF1-211ENST00000531709 USP42Q9H9J4 1324 aaKnown RBP13.12□□□□□ -0.31
NXF1-211ENST00000531709 USP27XA6NNY8 438 aa13.12□□□□□ -0.31
NXF1-211ENST00000531709 ZNF202O95125 648 aa13.12□□□□□ -0.31
NXF1-211ENST00000531709 SLC26A6Q9BXS9 759 aa13.12□□□□□ -0.31
NXF1-211ENST00000531709 OGFRQ9NZT2 677 aa13.12□□□□□ -0.31
NXF1-211ENST00000531709 TECPR2O15040 1411 aa13.12□□□□□ -0.31
NXF1-211ENST00000531709 IFIT3O14879 490 aaKnown RBP13.11□□□□□ -0.31
NXF1-211ENST00000531709 CBFA2T2O43439 604 aa13.11□□□□□ -0.31
NXF1-211ENST00000531709 PHKBQ93100 1093 aa13.11□□□□□ -0.31
NXF1-211ENST00000531709 GOLPH3LQ9H4A5 285 aa13.11□□□□□ -0.31
NXF1-211ENST00000531709 TCHHQ07283 1943 aa13.11□□□□□ -0.31
NXF1-211ENST00000531709 GOLGA8AA7E2F4 631 aa13.11□□□□□ -0.31
NXF1-211ENST00000531709 PHKG2P15735 406 aa13.11□□□□□ -0.31
NXF1-211ENST00000531709 TDO2P48775 406 aa13.11□□□□□ -0.31
NXF1-211ENST00000531709 DPCR1Q3MIW9 517 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms