RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 WDR90Q96KV7 1748 aa9.46□□□□□ -0.9
TRIM53CP-201ENST00000531490 CNTNAP4Q9C0A0 1308 aa9.46□□□□□ -0.9
TRIM53CP-201ENST00000531490 AAASQ9NRG9 546 aa9.46□□□□□ -0.9
TRIM53CP-201ENST00000531490 ST8SIA5O15466 376 aa9.45□□□□□ -0.9
TRIM53CP-201ENST00000531490 CRKLP46109 303 aaKnown RBP9.45□□□□□ -0.9
TRIM53CP-201ENST00000531490 CABP4P57796 275 aa9.45□□□□□ -0.9
TRIM53CP-201ENST00000531490 AGERQ15109 404 aa9.45□□□□□ -0.9
TRIM53CP-201ENST00000531490 BPHLQ86WA6 291 aaPredicted RBP9.45□□□□□ -0.9
TRIM53CP-201ENST00000531490 EPS8L1Q8TE68 723 aa9.45□□□□□ -0.9
TRIM53CP-201ENST00000531490 TLL2Q9Y6L7 1015 aa9.45□□□□□ -0.9
TRIM53CP-201ENST00000531490 USP42Q9H9J4 1324 aaKnown RBP9.44□□□□□ -0.9
TRIM53CP-201ENST00000531490 ERVV-2B6SEH9 535 aa9.44□□□□□ -0.9
TRIM53CP-201ENST00000531490 POLRMTO00411 1230 aaKnown RBP9.44□□□□□ -0.9
TRIM53CP-201ENST00000531490 ZEB1P37275 1124 aaPredicted RBP9.44□□□□□ -0.9
TRIM53CP-201ENST00000531490 SH3RF1Q7Z6J0 888 aa9.44□□□□□ -0.9
TRIM53CP-201ENST00000531490 CRIPAKQ8N1N5 446 aa9.44□□□□□ -0.9
TRIM53CP-201ENST00000531490 HPS1Q92902 700 aa9.44□□□□□ -0.9
TRIM53CP-201ENST00000531490 ITGB4P16144 1822 aa9.44□□□□□ -0.9
TRIM53CP-201ENST00000531490 KDM6AO15550 1401 aaPredicted RBP9.43□□□□□ -0.9
TRIM53CP-201ENST00000531490 C4AP0C0L4 1744 aa9.43□□□□□ -0.9
TRIM53CP-201ENST00000531490 POTECB2RU33 542 aa9.43□□□□□ -0.9
TRIM53CP-201ENST00000531490 TM4SF1P30408 202 aa9.43□□□□□ -0.9
TRIM53CP-201ENST00000531490 IL13P35225 146 aa9.43□□□□□ -0.9
TRIM53CP-201ENST00000531490 ZNF530Q6P9A1 599 aaPredicted RBP9.43□□□□□ -0.9
TRIM53CP-201ENST00000531490 INTS5Q6P9B9 1019 aaKnown RBP9.43□□□□□ -0.9
TRIM53CP-201ENST00000531490 SH3BP5LQ7L8J4 393 aa9.43□□□□□ -0.9
TRIM53CP-201ENST00000531490 MPNDQ8N594 471 aa9.43□□□□□ -0.9
TRIM53CP-201ENST00000531490 FAM174AQ8TBP5 190 aa9.43□□□□□ -0.9
TRIM53CP-201ENST00000531490 FKBPLQ9UIM3 349 aa9.43□□□□□ -0.9
TRIM53CP-201ENST00000531490 PKD1L3Q7Z443 1732 aa9.42□□□□□ -0.9
TRIM53CP-201ENST00000531490 GLTPD2A6NH11 291 aa9.42□□□□□ -0.9
TRIM53CP-201ENST00000531490 VEGFAP15692 232 aaPredicted RBP9.42□□□□□ -0.9
TRIM53CP-201ENST00000531490 LMNB1P20700 586 aa9.42□□□□□ -0.9
TRIM53CP-201ENST00000531490 DDX10Q13206 875 aaKnown RBP9.42□□□□□ -0.9
TRIM53CP-201ENST00000531490 CTC1Q2NKJ3 1217 aa9.42□□□□□ -0.9
TRIM53CP-201ENST00000531490 USPL1Q5W0Q7 1092 aa9.42□□□□□ -0.9
TRIM53CP-201ENST00000531490 AEBP1Q8IUX7 1158 aa9.42□□□□□ -0.9
TRIM53CP-201ENST00000531490 NFATC2IPQ8NCF5 419 aa9.42□□□□□ -0.9
TRIM53CP-201ENST00000531490 GPKOWQ92917 476 aaPredicted RBP eCLIP9.42□□□□□ -0.9
TRIM53CP-201ENST00000531490 MKRN1Q9UHC7 482 aaKnown RBP9.42□□□□□ -0.9
TRIM53CP-201ENST00000531490 KIF13BQ9NQT8 1826 aa9.41□□□□□ -0.9
TRIM53CP-201ENST00000531490 NFKBIEO00221 500 aa9.41□□□□□ -0.9
TRIM53CP-201ENST00000531490 SMCPP49901 116 aaPredicted RBP9.41□□□□□ -0.9
TRIM53CP-201ENST00000531490 NFIXQ14938 502 aa9.41□□□□□ -0.9
TRIM53CP-201ENST00000531490 DNAJC10Q8IXB1 793 aa9.41□□□□□ -0.9
TRIM53CP-201ENST00000531490 WASF2Q9Y6W5 498 aa9.41□□□□□ -0.9
TRIM53CP-201ENST00000531490 NPC1L1Q9UHC9 1359 aa9.41□□□□□ -0.9
TRIM53CP-201ENST00000531490 AXIN1O15169 862 aa9.4□□□□□ -0.9
TRIM53CP-201ENST00000531490 SULT6B1Q6IMI4 303 aa9.4□□□□□ -0.9
TRIM53CP-201ENST00000531490 PDXDC2PQ6P474 469 aa9.4□□□□□ -0.9
TRIM53CP-201ENST00000531490 C1QTNF2Q9BXJ5 285 aa9.4□□□□□ -0.9
TRIM53CP-201ENST00000531490 TRIM34Q9BYJ4 488 aa9.4□□□□□ -0.9
TRIM53CP-201ENST00000531490 DACH1Q9UI36 760 aa9.4□□□□□ -0.9
TRIM53CP-201ENST00000531490 MAGEB6P1A0A0J9YX57 407 aa9.39□□□□□ -0.91
TRIM53CP-201ENST00000531490 FOXN1O15353 648 aa9.39□□□□□ -0.91
TRIM53CP-201ENST00000531490 HSP90AB1P08238 724 aaKnown RBP9.39□□□□□ -0.91
TRIM53CP-201ENST00000531490 PLEKHO1Q53GL0 409 aaPredicted RBP9.39□□□□□ -0.91
TRIM53CP-201ENST00000531490 C2CD5Q86YS7 1000 aa9.39□□□□□ -0.91
TRIM53CP-201ENST00000531490 TTLL6Q8N841 843 aa9.39□□□□□ -0.91
TRIM53CP-201ENST00000531490 CDK15Q96Q40 435 aa9.39□□□□□ -0.91
TRIM53CP-201ENST00000531490 CARMIL3Q8ND23 1372 aa9.39□□□□□ -0.91
TRIM53CP-201ENST00000531490 ZC3H4Q9UPT8 1303 aaKnown RBP9.39□□□□□ -0.91
TRIM53CP-201ENST00000531490 DIAPH1O60610 1272 aaKnown RBP9.38□□□□□ -0.91
TRIM53CP-201ENST00000531490 HMOX1P09601 288 aa9.38□□□□□ -0.91
TRIM53CP-201ENST00000531490 PPP2R1AP30153 589 aa9.38□□□□□ -0.91
TRIM53CP-201ENST00000531490 SOS1Q07889 1333 aaPredicted RBP9.38□□□□□ -0.91
TRIM53CP-201ENST00000531490 SERPINB2P05120 415 aa9.37□□□□□ -0.91
TRIM53CP-201ENST00000531490 SLC39A6Q13433 755 aa9.37□□□□□ -0.91
TRIM53CP-201ENST00000531490 ARID5BQ14865 1188 aa9.37□□□□□ -0.91
TRIM53CP-201ENST00000531490 BICDL1Q6ZP65 573 aa9.37□□□□□ -0.91
TRIM53CP-201ENST00000531490 BANK1Q8NDB2 785 aa9.37□□□□□ -0.91
TRIM53CP-201ENST00000531490 MYH14Q7Z406 1995 aaKnown RBP9.37□□□□□ -0.91
TRIM53CP-201ENST00000531490 C21orf2O43822 256 aa9.37□□□□□ -0.91
TRIM53CP-201ENST00000531490 ADH1CP00326 375 aa9.37□□□□□ -0.91
TRIM53CP-201ENST00000531490 CYP19A1P11511 503 aaPredicted RBP9.37□□□□□ -0.91
TRIM53CP-201ENST00000531490 ERFEQ4G0M1 354 aa9.37□□□□□ -0.91
TRIM53CP-201ENST00000531490 C1orf141Q5JVX7 400 aa9.37□□□□□ -0.91
TRIM53CP-201ENST00000531490 OCSTAMPQ9BR26 566 aa9.37□□□□□ -0.91
TRIM53CP-201ENST00000531490 ARHGAP9Q9BRR9 750 aa9.37□□□□□ -0.91
TRIM53CP-201ENST00000531490 LGR6Q9HBX8 967 aa9.37□□□□□ -0.91
TRIM53CP-201ENST00000531490 ZBTB1Q9Y2K1 713 aa9.37□□□□□ -0.91
TRIM53CP-201ENST00000531490 BRCA1P38398 1863 aaKnown RBP9.36□□□□□ -0.91
TRIM53CP-201ENST00000531490 DDNO94850 711 aaPredicted RBP9.36□□□□□ -0.91
TRIM53CP-201ENST00000531490 GRM5P41594 1212 aa9.36□□□□□ -0.91
TRIM53CP-201ENST00000531490 NNTQ13423 1086 aa9.36□□□□□ -0.91
TRIM53CP-201ENST00000531490 AMOTQ4VCS5 1084 aa9.36□□□□□ -0.91
TRIM53CP-201ENST00000531490 ZNF787Q6DD87 383 aa9.36□□□□□ -0.91
TRIM53CP-201ENST00000531490 TRMT44Q8IYL2 757 aaKnown RBP9.36□□□□□ -0.91
TRIM53CP-201ENST00000531490 ZNF622Q969S3 477 aaKnown RBP eCLIP9.36□□□□□ -0.91
TRIM53CP-201ENST00000531490 NARFQ9UHQ1 456 aa9.36□□□□□ -0.91
TRIM53CP-201ENST00000531490 H0YIN7 160 aa9.35□□□□□ -0.91
TRIM53CP-201ENST00000531490 U2SURPO15042 1029 aaKnown RBP9.35□□□□□ -0.91
TRIM53CP-201ENST00000531490 CANXP27824 592 aaKnown RBP9.35□□□□□ -0.91
TRIM53CP-201ENST00000531490 SNRKQ9NRH2 765 aa9.35□□□□□ -0.91
TRIM53CP-201ENST00000531490 COL3A1P02461 1466 aaPredicted RBP9.34□□□□□ -0.91
TRIM53CP-201ENST00000531490 COL15A1P39059 1388 aa9.34□□□□□ -0.91
TRIM53CP-201ENST00000531490 VEGFBP49765 207 aa9.34□□□□□ -0.91
TRIM53CP-201ENST00000531490 LBX1P52954 281 aa9.34□□□□□ -0.91
TRIM53CP-201ENST00000531490 PTK2Q05397 1052 aa9.34□□□□□ -0.91
TRIM53CP-201ENST00000531490 MTHFSDQ2M296 383 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms