RNA–Protein interactions for RNA: ENST00000531484.5

RELA-217, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 2

Gene RELA, Length 2,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-217ENST00000531484 CREB3L3Q68CJ9 461 aa12.32□□□□□ -0.44
RELA-217ENST00000531484 DZIP3Q86Y13 1208 aaKnown RBP12.32□□□□□ -0.44
RELA-217ENST00000531484 MAP4K1Q92918 833 aa12.32□□□□□ -0.44
RELA-217ENST00000531484 CAMKK2Q96RR4 588 aa12.32□□□□□ -0.44
RELA-217ENST00000531484 LARP6Q9BRS8 491 aaKnown RBP12.32□□□□□ -0.44
RELA-217ENST00000531484 ZSWIM6Q9HCJ5 1215 aa12.32□□□□□ -0.44
RELA-217ENST00000531484 DBNLQ9UJU6 430 aaKnown RBP12.32□□□□□ -0.44
RELA-217ENST00000531484 SMC3Q9UQE7 1217 aa12.32□□□□□ -0.44
RELA-217ENST00000531484 RFX7Q2KHR2 1363 aa12.32□□□□□ -0.44
RELA-217ENST00000531484 TAF1LQ8IZX4 1826 aa12.31□□□□□ -0.44
RELA-217ENST00000531484 ADCY5O95622 1261 aa12.31□□□□□ -0.44
RELA-217ENST00000531484 ATP5JP18859 108 aa12.31□□□□□ -0.44
RELA-217ENST00000531484 CASP7P55210 303 aa12.31□□□□□ -0.44
RELA-217ENST00000531484 RNF20Q5VTR2 975 aa12.31□□□□□ -0.44
RELA-217ENST00000531484 FAM184AQ8NB25 1140 aa12.31□□□□□ -0.44
RELA-217ENST00000531484 ZSCAN31Q96LW9 406 aaPredicted RBP12.31□□□□□ -0.44
RELA-217ENST00000531484 GDPD2Q9HCC8 539 aa12.31□□□□□ -0.44
RELA-217ENST00000531484 SH2B1Q9NRF2 756 aaPredicted RBP12.31□□□□□ -0.44
RELA-217ENST00000531484 CHMP3Q9Y3E7 222 aa12.31□□□□□ -0.44
RELA-217ENST00000531484 PLSCR1O15162 318 aa12.31□□□□□ -0.44
RELA-217ENST00000531484 PDCL2Q8N4E4 241 aa12.31□□□□□ -0.44
RELA-217ENST00000531484 ARHGEF1Q92888 912 aaKnown RBP12.31□□□□□ -0.44
RELA-217ENST00000531484 CWC25Q9NXE8 425 aaPredicted RBP12.31□□□□□ -0.44
RELA-217ENST00000531484 C4BP0C0L5 1744 aa12.3□□□□□ -0.44
RELA-217ENST00000531484 LARGE1O95461 756 aa12.3□□□□□ -0.44
RELA-217ENST00000531484 PSMA5P28066 241 aa12.3□□□□□ -0.44
RELA-217ENST00000531484 IL6STP40189 918 aaPredicted RBP12.3□□□□□ -0.44
RELA-217ENST00000531484 PDE4CQ08493 712 aa12.3□□□□□ -0.44
RELA-217ENST00000531484 FOXD4L6Q3SYB3 417 aaPredicted RBP12.3□□□□□ -0.44
RELA-217ENST00000531484 LMBR1LQ6UX01 489 aa12.3□□□□□ -0.44
RELA-217ENST00000531484 FOXD4L3Q6VB84 417 aaPredicted RBP12.3□□□□□ -0.44
RELA-217ENST00000531484 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.3□□□□□ -0.44
RELA-217ENST00000531484 SLC27A2O14975 620 aa12.3□□□□□ -0.44
RELA-217ENST00000531484 STX6O43752 255 aa12.3□□□□□ -0.44
RELA-217ENST00000531484 USPL1Q5W0Q7 1092 aa12.3□□□□□ -0.44
RELA-217ENST00000531484 BICDL1Q6ZP65 573 aa12.3□□□□□ -0.44
RELA-217ENST00000531484 USP48Q86UV5 1035 aa12.3□□□□□ -0.44
RELA-217ENST00000531484 CCDC83Q8IWF9 413 aa12.3□□□□□ -0.44
RELA-217ENST00000531484 CCDC24Q8N4L8 307 aa12.3□□□□□ -0.44
RELA-217ENST00000531484 ANKRD7Q92527 254 aa12.3□□□□□ -0.44
RELA-217ENST00000531484 CAMTA2O94983 1202 aa12.29□□□□□ -0.44
RELA-217ENST00000531484 ZSCAN22P10073 491 aaPredicted RBP12.29□□□□□ -0.44
RELA-217ENST00000531484 SYT1P21579 422 aa12.29□□□□□ -0.44
RELA-217ENST00000531484 U2AF2P26368 475 aaKnown RBP eCLIP12.29□□□□□ -0.44
RELA-217ENST00000531484 AK7Q96M32 723 aa12.29□□□□□ -0.44
RELA-217ENST00000531484 DNAJC2Q99543 621 aaKnown RBP12.29□□□□□ -0.44
RELA-217ENST00000531484 HMG20BQ9P0W2 317 aa12.29□□□□□ -0.44
RELA-217ENST00000531484 MAP3K15Q6ZN16 1313 aa12.29□□□□□ -0.44
RELA-217ENST00000531484 CNTNAP4Q9C0A0 1308 aa12.29□□□□□ -0.44
RELA-217ENST00000531484 H7C1W4 665 aa12.28□□□□□ -0.44
RELA-217ENST00000531484 RIOK3O14730 519 aaKnown RBP12.28□□□□□ -0.44
RELA-217ENST00000531484 ZNF589Q86UQ0 364 aaPredicted RBP12.28□□□□□ -0.44
RELA-217ENST00000531484 EDC3Q96F86 508 aaKnown RBP12.28□□□□□ -0.44
RELA-217ENST00000531484 DBNDD2Q9BQY9 259 aa12.28□□□□□ -0.44
RELA-217ENST00000531484 ATP6V1DQ9Y5K8 247 aa12.28□□□□□ -0.44
RELA-217ENST00000531484 UBN2Q6ZU65 1347 aa12.28□□□□□ -0.44
RELA-217ENST00000531484 RPS6KA4O75676 772 aa12.28□□□□□ -0.44
RELA-217ENST00000531484 PDIA4P13667 645 aaKnown RBP12.28□□□□□ -0.44
RELA-217ENST00000531484 HCLS1P14317 486 aaPredicted RBP12.28□□□□□ -0.44
RELA-217ENST00000531484 GJB2P29033 226 aa12.28□□□□□ -0.44
RELA-217ENST00000531484 FOXO4P98177 505 aa12.28□□□□□ -0.44
RELA-217ENST00000531484 BLOC1S2Q6QNY1 142 aa12.28□□□□□ -0.44
RELA-217ENST00000531484 KCNF1Q9H3M0 494 aa12.28□□□□□ -0.44
RELA-217ENST00000531484 SOCS7O14512 581 aa12.27□□□□□ -0.44
RELA-217ENST00000531484 F13A1P00488 732 aa12.27□□□□□ -0.44
RELA-217ENST00000531484 GTF2E1P29083 439 aaPredicted RBP12.27□□□□□ -0.44
RELA-217ENST00000531484 SLC27A3Q5K4L6 730 aa12.27□□□□□ -0.44
RELA-217ENST00000531484 KIF6Q6ZMV9 814 aa12.27□□□□□ -0.44
RELA-217ENST00000531484 CCDC191Q8NCU4 936 aa12.27□□□□□ -0.44
RELA-217ENST00000531484 KIAA1524Q8TCG1 905 aa12.27□□□□□ -0.44
RELA-217ENST00000531484 HAUS7Q99871 368 aa12.27□□□□□ -0.44
RELA-217ENST00000531484 PYCARDQ9ULZ3 195 aa12.27□□□□□ -0.44
RELA-217ENST00000531484 RTCBQ9Y3I0 505 aaKnown RBP12.27□□□□□ -0.44
RELA-217ENST00000531484 SPEF2Q9C093 1822 aa12.27□□□□□ -0.45
RELA-217ENST00000531484 ZNF609O15014 1411 aa12.27□□□□□ -0.45
RELA-217ENST00000531484 RREB1Q92766 1687 aa12.27□□□□□ -0.45
RELA-217ENST00000531484 CTIFO43310 598 aaKnown RBP12.27□□□□□ -0.45
RELA-217ENST00000531484 IGSF3O75054 1194 aa12.27□□□□□ -0.45
RELA-217ENST00000531484 ANKRD1Q15327 319 aa12.27□□□□□ -0.45
RELA-217ENST00000531484 CCDC183Q5T5S1 534 aa12.27□□□□□ -0.45
RELA-217ENST00000531484 TMEM87AQ8NBN3 555 aa12.27□□□□□ -0.45
RELA-217ENST00000531484 AKT1S1Q96B36 256 aa12.27□□□□□ -0.45
RELA-217ENST00000531484 TFCP2L1Q9NZI6 479 aa12.27□□□□□ -0.45
RELA-217ENST00000531484 NDUFB9Q9Y6M9 179 aa12.27□□□□□ -0.45
RELA-217ENST00000531484 ME3Q16798 604 aa12.26□□□□□ -0.45
RELA-217ENST00000531484 COL23A1Q86Y22 540 aaPredicted RBP12.26□□□□□ -0.45
RELA-217ENST00000531484 UPF1Q92900 1129 aaKnown RBP eCLIP12.26□□□□□ -0.45
RELA-217ENST00000531484 FAM89AQ96GI7 184 aa12.26□□□□□ -0.45
RELA-217ENST00000531484 CICQ96RK0 1608 aaPredicted RBP12.26□□□□□ -0.45
RELA-217ENST00000531484 LAMA4Q16363 1823 aa12.26□□□□□ -0.45
RELA-217ENST00000531484 AP5Z1O43299 807 aa12.26□□□□□ -0.45
RELA-217ENST00000531484 KDM4AO75164 1064 aa12.26□□□□□ -0.45
RELA-217ENST00000531484 TAF5LO75529 589 aa12.26□□□□□ -0.45
RELA-217ENST00000531484 RPS6KB1P23443 525 aa12.26□□□□□ -0.45
RELA-217ENST00000531484 TCIRG1Q13488 830 aa12.26□□□□□ -0.45
RELA-217ENST00000531484 KRT32Q14532 448 aa12.26□□□□□ -0.45
RELA-217ENST00000531484 RC3H1Q5TC82 1133 aaKnown RBP12.26□□□□□ -0.45
RELA-217ENST00000531484 TBC1D9BQ66K14 1250 aa12.26□□□□□ -0.45
RELA-217ENST00000531484 GIGYF2Q6Y7W6 1299 aaKnown RBP12.26□□□□□ -0.45
RELA-217ENST00000531484 DDX46Q7L014 1031 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms