RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 GMPRP36959 345 aa9.91□□□□□ -0.82
CASP4-208ENST00000530309 PERM1Q5SV97 790 aa9.91□□□□□ -0.82
CASP4-208ENST00000530309 LCE2CQ5TA81 110 aa9.91□□□□□ -0.82
CASP4-208ENST00000530309 PRPF40BQ6NWY9 871 aaKnown RBP9.91□□□□□ -0.82
CASP4-208ENST00000530309 ELMSAN1Q6PJG2 1045 aa9.91□□□□□ -0.82
CASP4-208ENST00000530309 TMEM102Q8N9M5 508 aaPredicted RBP9.91□□□□□ -0.82
CASP4-208ENST00000530309 GLIS3Q8NEA6 775 aa9.91□□□□□ -0.82
CASP4-208ENST00000530309 PLD4Q96BZ4 506 aa9.91□□□□□ -0.82
CASP4-208ENST00000530309 TCF12Q99081 682 aa9.91□□□□□ -0.82
CASP4-208ENST00000530309 FRRS1LQ9P0K9 344 aa9.91□□□□□ -0.82
CASP4-208ENST00000530309 PDE2AO00408 941 aaPredicted RBP9.9□□□□□ -0.82
CASP4-208ENST00000530309 LDLRAD1Q5T700 205 aa9.9□□□□□ -0.82
CASP4-208ENST00000530309 MICALL1Q8N3F8 863 aa9.9□□□□□ -0.82
CASP4-208ENST00000530309 NXPE3Q969Y0 559 aa9.9□□□□□ -0.82
CASP4-208ENST00000530309 ZNF775Q96BV0 537 aaPredicted RBP9.9□□□□□ -0.82
CASP4-208ENST00000530309 HHIPQ96QV1 700 aa9.9□□□□□ -0.82
CASP4-208ENST00000530309 BHLHE41Q9C0J9 482 aaPredicted RBP9.9□□□□□ -0.82
CASP4-208ENST00000530309 SMNDC1O75940 238 aaKnown RBP eCLIP9.89□□□□□ -0.83
CASP4-208ENST00000530309 CTSHP09668 335 aa9.89□□□□□ -0.83
CASP4-208ENST00000530309 USP17L7P0C7H9 530 aa9.89□□□□□ -0.83
CASP4-208ENST00000530309 CEP135Q66GS9 1140 aa9.89□□□□□ -0.83
CASP4-208ENST00000530309 CRELD1Q96HD1 420 aa9.89□□□□□ -0.83
CASP4-208ENST00000530309 SMG9Q9H0W8 520 aaKnown RBP9.89□□□□□ -0.83
CASP4-208ENST00000530309 TMEM238LA0A1B0GVL6 79 aa9.88□□□□□ -0.83
CASP4-208ENST00000530309 GSTT1P30711 240 aa9.88□□□□□ -0.83
CASP4-208ENST00000530309 PSAPL1Q6NUJ1 521 aa9.88□□□□□ -0.83
CASP4-208ENST00000530309 C1orf229Q6ZS94 237 aaPredicted RBP9.88□□□□□ -0.83
CASP4-208ENST00000530309 EDARADDQ8WWZ3 215 aa9.88□□□□□ -0.83
CASP4-208ENST00000530309 POP1Q99575 1024 aaKnown RBP9.88□□□□□ -0.83
CASP4-208ENST00000530309 LPIN3Q9BQK8 851 aa9.88□□□□□ -0.83
CASP4-208ENST00000530309 ABCB6Q9NP58 842 aa9.88□□□□□ -0.83
CASP4-208ENST00000530309 LRRC4BQ9NT99 713 aa9.88□□□□□ -0.83
CASP4-208ENST00000530309 OIP5O43482 229 aa9.87□□□□□ -0.83
CASP4-208ENST00000530309 XRCC5P13010 732 aaKnown RBP9.87□□□□□ -0.83
CASP4-208ENST00000530309 TREML4Q6UXN2 200 aa9.87□□□□□ -0.83
CASP4-208ENST00000530309 TMEM87AQ8NBN3 555 aa9.87□□□□□ -0.83
CASP4-208ENST00000530309 GALNT6Q8NCL4 622 aa9.87□□□□□ -0.83
CASP4-208ENST00000530309 TTC9Q92623 222 aa9.87□□□□□ -0.83
CASP4-208ENST00000530309 IGSF5Q9NSI5 407 aa9.87□□□□□ -0.83
CASP4-208ENST00000530309 STARD13Q9Y3M8 1113 aa9.87□□□□□ -0.83
CASP4-208ENST00000530309 RGS9O75916 674 aaPredicted RBP9.86□□□□□ -0.83
CASP4-208ENST00000530309 BCRP11274 1271 aa9.86□□□□□ -0.83
CASP4-208ENST00000530309 GRIA4P48058 902 aa9.86□□□□□ -0.83
CASP4-208ENST00000530309 FCGRTP55899 365 aa9.86□□□□□ -0.83
CASP4-208ENST00000530309 METTL12A8MUP2 240 aa9.85□□□□□ -0.83
CASP4-208ENST00000530309 SCAMP3O14828 347 aaKnown RBP9.85□□□□□ -0.83
CASP4-208ENST00000530309 TCF3P15923 654 aa9.85□□□□□ -0.83
CASP4-208ENST00000530309 SPRED3Q2MJR0 410 aa9.85□□□□□ -0.83
CASP4-208ENST00000530309 KANK3Q6NY19 840 aa9.85□□□□□ -0.83
CASP4-208ENST00000530309 DTHD1Q6ZMT9 781 aa9.85□□□□□ -0.83
CASP4-208ENST00000530309 C20orf204Q6ZNR8 217 aa9.85□□□□□ -0.83
CASP4-208ENST00000530309 C3orf58Q8NDZ4 430 aa9.85□□□□□ -0.83
CASP4-208ENST00000530309 ASAP3Q8TDY4 903 aa9.85□□□□□ -0.83
CASP4-208ENST00000530309 NUDT8Q8WV74 236 aa9.85□□□□□ -0.83
CASP4-208ENST00000530309 ZFYVE1Q9HBF4 777 aa9.85□□□□□ -0.83
CASP4-208ENST00000530309 A0A096LPE4 126 aa9.84□□□□□ -0.83
CASP4-208ENST00000530309 A0A1W2PPZ6 126 aa9.84□□□□□ -0.83
CASP4-208ENST00000530309 ITPKAP23677 461 aa9.84□□□□□ -0.83
CASP4-208ENST00000530309 PTPN12Q05209 780 aaKnown RBP9.84□□□□□ -0.83
CASP4-208ENST00000530309 BTBD6Q96KE9 485 aa9.84□□□□□ -0.83
CASP4-208ENST00000530309 TRIM33Q9UPN9 1127 aa9.84□□□□□ -0.83
CASP4-208ENST00000530309 CELA2BP08218 269 aaPredicted RBP9.83□□□□□ -0.84
CASP4-208ENST00000530309 PTPRAP18433 802 aa9.83□□□□□ -0.84
CASP4-208ENST00000530309 TAF1CQ15572 869 aaPredicted RBP9.83□□□□□ -0.84
CASP4-208ENST00000530309 MEI1Q5TIA1 1274 aa9.83□□□□□ -0.84
CASP4-208ENST00000530309 LYPD4Q6UWN0 246 aa9.83□□□□□ -0.84
CASP4-208ENST00000530309 CHSY3Q70JA7 882 aa9.83□□□□□ -0.84
CASP4-208ENST00000530309 BSNDQ8WZ55 320 aa9.83□□□□□ -0.84
CASP4-208ENST00000530309 JPH1Q9HDC5 661 aaPredicted RBP9.83□□□□□ -0.84
CASP4-208ENST00000530309 PPM1HQ9ULR3 514 aa9.83□□□□□ -0.84
CASP4-208ENST00000530309 AKAP2Q9Y2D5 859 aa9.83□□□□□ -0.84
CASP4-208ENST00000530309 USP31Q70CQ4 1352 aa9.83□□□□□ -0.84
CASP4-208ENST00000530309 SHISA8B8ZZ34 492 aa9.82□□□□□ -0.84
CASP4-208ENST00000530309 ALBP02768 609 aa9.82□□□□□ -0.84
CASP4-208ENST00000530309 ST13P50502 369 aaKnown RBP9.82□□□□□ -0.84
CASP4-208ENST00000530309 LCE2AQ5TA79 106 aaPredicted RBP9.82□□□□□ -0.84
CASP4-208ENST00000530309 CACTIN-AS1Q8N1I8 211 aa9.82□□□□□ -0.84
CASP4-208ENST00000530309 ADAM19Q9H013 955 aa9.82□□□□□ -0.84
CASP4-208ENST00000530309 METTL5Q9NRN9 209 aaKnown RBP9.82□□□□□ -0.84
CASP4-208ENST00000530309 LILRB5O75023 590 aa9.81□□□□□ -0.84
CASP4-208ENST00000530309 GDF6Q6KF10 455 aaPredicted RBP9.81□□□□□ -0.84
CASP4-208ENST00000530309 ADAMTSL4Q6UY14 1074 aa9.81□□□□□ -0.84
CASP4-208ENST00000530309 ANKRD24Q8TF21 1146 aa9.81□□□□□ -0.84
CASP4-208ENST00000530309 LACRTQ9GZZ8 138 aa9.81□□□□□ -0.84
CASP4-208ENST00000530309 M0R082 166 aa9.8□□□□□ -0.84
CASP4-208ENST00000530309 AMPD1P23109 780 aa9.8□□□□□ -0.84
CASP4-208ENST00000530309 ZNF76P36508 570 aa9.8□□□□□ -0.84
CASP4-208ENST00000530309 GRIK5Q16478 980 aa9.8□□□□□ -0.84
CASP4-208ENST00000530309 RPS26P11Q5JNZ5 115 aaPredicted RBP9.8□□□□□ -0.84
CASP4-208ENST00000530309 ZNF417Q8TAU3 575 aa9.8□□□□□ -0.84
CASP4-208ENST00000530309 WHAMMQ8TF30 809 aa9.8□□□□□ -0.84
CASP4-208ENST00000530309 ZNF587Q96SQ5 575 aaPredicted RBP9.8□□□□□ -0.84
CASP4-208ENST00000530309 MUC3BQ9H195 1237 aa9.8□□□□□ -0.84
CASP4-208ENST00000530309 ZNF576Q9H609 170 aa9.8□□□□□ -0.84
CASP4-208ENST00000530309 SOX13Q9UN79 622 aa9.8□□□□□ -0.84
CASP4-208ENST00000530309 TTF2Q9UNY4 1162 aaKnown RBP9.8□□□□□ -0.84
CASP4-208ENST00000530309 FAM177BA6PVY3 158 aa9.79□□□□□ -0.84
CASP4-208ENST00000530309 CDC27P30260 824 aa9.79□□□□□ -0.84
CASP4-208ENST00000530309 AFF1P51825 1210 aaKnown RBP9.79□□□□□ -0.84
CASP4-208ENST00000530309 FANCCQ00597 558 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms