RNA–Protein interactions for RNA: ENST00000529970.5

ARHGEF12-208, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 2

Gene ARHGEF12, Length 3,786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-208ENST00000529970 ANGEL2Q5VTE6 544 aaKnown RBP5.3□□□□□ -1.56
ARHGEF12-208ENST00000529970 FAM117AQ9C073 453 aa5.3□□□□□ -1.56
ARHGEF12-208ENST00000529970 KDM4CQ9H3R0 1056 aa5.3□□□□□ -1.56
ARHGEF12-208ENST00000529970 PRDM16Q9HAZ2 1276 aa5.3□□□□□ -1.56
ARHGEF12-208ENST00000529970 NSFL1CQ9UNZ2 370 aaKnown RBP5.3□□□□□ -1.56
ARHGEF12-208ENST00000529970 RRP7AQ9Y3A4 280 aaKnown RBP5.3□□□□□ -1.56
ARHGEF12-208ENST00000529970 USP16Q9Y5T5 823 aa5.3□□□□□ -1.56
ARHGEF12-208ENST00000529970 H0YGN5 161 aa5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 UBE2Q2LH0YL09 131 aa5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 SMARCA5O60264 1052 aaPredicted RBP5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 ECE2O60344 883 aa5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 USP17L8P0C7I0 530 aa5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 HOXD10P28358 340 aa5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 SCARF1Q14162 830 aa5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 PAPPA2Q9BXP8 1791 aa5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 ABCC4O15439 1325 aa5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 MYO3BQ8WXR4 1341 aa5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 FANCIQ9NVI1 1328 aa5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 POTEFA5A3E0 1075 aa5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 GNRH1P01148 92 aa5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 SP3Q02447 781 aa5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 MKRN4PQ13434 485 aaPredicted RBP5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 TICAM2Q86XR7 235 aa5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 ZBTB48P10074 688 aaPredicted RBP5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 GIGYF2Q6Y7W6 1299 aaKnown RBP5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 IL17REQ8NFR9 667 aa5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 ZBTB3Q9H5J0 574 aa5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 ZBTB12Q9Y330 459 aaPredicted RBP5.29□□□□□ -1.56
ARHGEF12-208ENST00000529970 CACNA1SQ13698 1873 aa5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 SH3TC1Q8TE82 1336 aa5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 RIMBP2O15034 1052 aa5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 EN2P19622 333 aaPredicted RBP5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 TAF7Q15545 349 aaPredicted RBP5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 SUPT20HL1Q3ZLR7 823 aa5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 DBNDD1Q9H9R9 158 aa5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 ZFYVE28Q9HCC9 887 aa5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 RNF216Q9NWF9 866 aaPredicted RBP5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 SNED1Q8TER0 1413 aa5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 PIP4K2AP48426 406 aaPredicted RBP5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 HLFQ16534 295 aa5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 SUSD4Q5VX71 490 aa5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 RSBN1LQ6PCB5 846 aaPredicted RBP5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 PNNQ9H307 717 aaKnown RBP5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 TRMT112Q9UI30 125 aaKnown RBP5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 MYO1BO43795 1136 aa5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 NTSR2O95665 410 aa5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 IREB2P48200 963 aaKnown RBP5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 ZNF280AP59817 542 aaPredicted RBP5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 UBXN2AP68543 259 aa5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 SPRYD7Q5W111 196 aa5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 GPR153Q6NV75 609 aa5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 GGA1Q9UJY5 639 aa5.28□□□□□ -1.56
ARHGEF12-208ENST00000529970 VIL1P09327 827 aaKnown RBP5.27□□□□□ -1.57
ARHGEF12-208ENST00000529970 WDR43Q15061 677 aaKnown RBP eCLIP5.27□□□□□ -1.57
ARHGEF12-208ENST00000529970 IFNL1Q8IU54 200 aa5.27□□□□□ -1.57
ARHGEF12-208ENST00000529970 ZNF34Q8IZ26 560 aa5.27□□□□□ -1.57
ARHGEF12-208ENST00000529970 CD99L2Q8TCZ2 262 aa5.27□□□□□ -1.57
ARHGEF12-208ENST00000529970 MYOZ2Q9NPC6 264 aa5.27□□□□□ -1.57
ARHGEF12-208ENST00000529970 ANKIB1Q9P2G1 1089 aa5.27□□□□□ -1.57
ARHGEF12-208ENST00000529970 RCAN3Q9UKA8 241 aa5.27□□□□□ -1.57
ARHGEF12-208ENST00000529970 PPP2R3BQ9Y5P8 575 aa5.27□□□□□ -1.57
ARHGEF12-208ENST00000529970 ANGEL1Q9UNK9 670 aaKnown RBP5.27□□□□□ -1.57
ARHGEF12-208ENST00000529970 CARNS1A5YM72 827 aa5.27□□□□□ -1.57
ARHGEF12-208ENST00000529970 USP17L3A6NCW0 530 aa5.27□□□□□ -1.57
ARHGEF12-208ENST00000529970 USP17L4A6NCW7 530 aa5.27□□□□□ -1.57
ARHGEF12-208ENST00000529970 TRAK2O60296 914 aa5.27□□□□□ -1.57
ARHGEF12-208ENST00000529970 MYL6BP14649 208 aa5.27□□□□□ -1.57
ARHGEF12-208ENST00000529970 CCDC27Q2M243 656 aa5.27□□□□□ -1.57
ARHGEF12-208ENST00000529970 RTL5Q5HYW3 569 aaPredicted RBP5.27□□□□□ -1.57
ARHGEF12-208ENST00000529970 USP17L1Q7RTZ2 530 aa5.27□□□□□ -1.57
ARHGEF12-208ENST00000529970 HELBQ8NG08 1087 aaPredicted RBP5.27□□□□□ -1.57
ARHGEF12-208ENST00000529970 BIN2Q9UBW5 565 aaPredicted RBP5.27□□□□□ -1.57
ARHGEF12-208ENST00000529970 CEMIPQ8WUJ3 1361 aa5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 ZNF609O15014 1411 aa5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 UBR2Q8IWV8 1755 aa5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 NBPF26B4DH59 902 aa5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 UFL1O94874 794 aa5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 DOK7Q18PE1 504 aa5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 NBPF10Q6P3W6 841 aaKnown RBP5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 ZNF333Q96JL9 665 aa5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 NOP58Q9Y2X3 529 aaKnown RBP5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 YDJCA8MPS7 323 aa5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 RRP1P56182 461 aaKnown RBP5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 PODNQ7Z5L7 613 aa5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 EXOC6Q8TAG9 804 aa5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 SYMPKQ92797 1274 aaKnown RBP5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 STXBP5LQ9Y2K9 1186 aa5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 ZMYND10O75800 440 aa5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 ATP2B4P23634 1241 aa5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 PRKAR2BP31323 418 aa5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 WNK4Q96J92 1243 aa5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 ZBTB47Q9UFB7 747 aaPredicted RBP5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 COL1A1P02452 1464 aaPredicted RBP5.26□□□□□ -1.57
ARHGEF12-208ENST00000529970 EVI5O60447 810 aa5.25□□□□□ -1.57
ARHGEF12-208ENST00000529970 TAF1CQ15572 869 aaPredicted RBP5.25□□□□□ -1.57
ARHGEF12-208ENST00000529970 TRIM47Q96LD4 638 aa5.25□□□□□ -1.57
ARHGEF12-208ENST00000529970 KCNQ3O43525 872 aa5.25□□□□□ -1.57
ARHGEF12-208ENST00000529970 PTPN12Q05209 780 aaKnown RBP5.25□□□□□ -1.57
ARHGEF12-208ENST00000529970 HOOK2Q96ED9 719 aa5.25□□□□□ -1.57
ARHGEF12-208ENST00000529970 OTUD5Q96G74 571 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms