RNA–Protein interactions for RNA: ENST00000527125.1

SCN3B-203, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 3

Gene SCN3B, Length 3,289 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-203ENST00000527125 IFIT2P09913 472 aaKnown RBP10.88□□□□□ -0.67
SCN3B-203ENST00000527125 CAPN2P17655 700 aa10.88□□□□□ -0.67
SCN3B-203ENST00000527125 IRX5P78411 483 aaPredicted RBP10.88□□□□□ -0.67
SCN3B-203ENST00000527125 CCAR1Q8IX12 1150 aaKnown RBP10.88□□□□□ -0.67
SCN3B-203ENST00000527125 FTOQ9C0B1 505 aaKnown RBP eCLIP10.88□□□□□ -0.67
SCN3B-203ENST00000527125 ST7Q9NRC1 585 aa10.88□□□□□ -0.67
SCN3B-203ENST00000527125 CASP7P55210 303 aa10.88□□□□□ -0.67
SCN3B-203ENST00000527125 CWF19L2Q2TBE0 894 aaKnown RBP10.88□□□□□ -0.67
SCN3B-203ENST00000527125 Q6ZUG5 572 aa10.88□□□□□ -0.67
SCN3B-203ENST00000527125 CHD4Q14839 1912 aa10.87□□□□□ -0.67
SCN3B-203ENST00000527125 RNMTO43148 476 aaKnown RBP10.87□□□□□ -0.67
SCN3B-203ENST00000527125 EPHA10Q5JZY3 1008 aa10.87□□□□□ -0.67
SCN3B-203ENST00000527125 DBNLQ9UJU6 430 aaKnown RBP10.87□□□□□ -0.67
SCN3B-203ENST00000527125 PLEKHG2Q9H7P9 1386 aa10.87□□□□□ -0.67
SCN3B-203ENST00000527125 ZNF142P52746 1687 aaPredicted RBP10.87□□□□□ -0.67
SCN3B-203ENST00000527125 CLCN6P51797 869 aa10.87□□□□□ -0.67
SCN3B-203ENST00000527125 ADALQ6DHV7 355 aa10.87□□□□□ -0.67
SCN3B-203ENST00000527125 REXO1L1PQ8IX06 675 aa10.87□□□□□ -0.67
SCN3B-203ENST00000527125 HAUS7Q99871 368 aa10.87□□□□□ -0.67
SCN3B-203ENST00000527125 ANO10Q9NW15 660 aa10.87□□□□□ -0.67
SCN3B-203ENST00000527125 AMOTL2Q9Y2J4 779 aa10.87□□□□□ -0.67
SCN3B-203ENST00000527125 ANXA1P04083 346 aa10.87□□□□□ -0.67
SCN3B-203ENST00000527125 BBXQ8WY36 941 aaPredicted RBP10.87□□□□□ -0.67
SCN3B-203ENST00000527125 DDX11Q96FC9 970 aa10.87□□□□□ -0.67
SCN3B-203ENST00000527125 DOCK2Q92608 1830 aa10.86□□□□□ -0.67
SCN3B-203ENST00000527125 ARAP2Q8WZ64 1704 aa10.86□□□□□ -0.67
SCN3B-203ENST00000527125 FOXP2O15409 715 aa10.86□□□□□ -0.67
SCN3B-203ENST00000527125 ATP8B1O43520 1251 aa10.86□□□□□ -0.67
SCN3B-203ENST00000527125 PNMA6AP0CW24 399 aaPredicted RBP10.86□□□□□ -0.67
SCN3B-203ENST00000527125 PCDHA7Q9UN72 937 aa10.86□□□□□ -0.67
SCN3B-203ENST00000527125 CHMP3Q9Y3E7 222 aa10.86□□□□□ -0.67
SCN3B-203ENST00000527125 U3KPZ7 1027 aaPredicted RBP10.86□□□□□ -0.67
SCN3B-203ENST00000527125 CHGBP05060 677 aa10.86□□□□□ -0.67
SCN3B-203ENST00000527125 PTPN12Q05209 780 aaKnown RBP10.86□□□□□ -0.67
SCN3B-203ENST00000527125 ZNF274Q96GC6 653 aaPredicted RBP10.86□□□□□ -0.67
SCN3B-203ENST00000527125 CCDC8Q9H0W5 538 aaPredicted RBP10.86□□□□□ -0.67
SCN3B-203ENST00000527125 ORC3Q9UBD5 711 aaPredicted RBP10.86□□□□□ -0.67
SCN3B-203ENST00000527125 TUBE1Q9UJT0 475 aa10.86□□□□□ -0.67
SCN3B-203ENST00000527125 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.86□□□□□ -0.67
SCN3B-203ENST00000527125 KDM6AO15550 1401 aaPredicted RBP10.86□□□□□ -0.67
SCN3B-203ENST00000527125 PRAMEF22A3QJZ6 481 aa10.85□□□□□ -0.67
SCN3B-203ENST00000527125 TADA3O75528 432 aa10.85□□□□□ -0.67
SCN3B-203ENST00000527125 AXDND1Q5T1B0 1012 aaPredicted RBP10.85□□□□□ -0.67
SCN3B-203ENST00000527125 CCDC150Q8NCX0 1101 aa10.85□□□□□ -0.67
SCN3B-203ENST00000527125 HDAC5Q9UQL6 1122 aa10.85□□□□□ -0.67
SCN3B-203ENST00000527125 TIAM2Q8IVF5 1701 aa10.85□□□□□ -0.67
SCN3B-203ENST00000527125 IKBKBO14920 756 aa10.85□□□□□ -0.67
SCN3B-203ENST00000527125 TBX2Q13207 712 aaPredicted RBP10.85□□□□□ -0.67
SCN3B-203ENST00000527125 LINC00301Q8NCQ3 95 aa10.85□□□□□ -0.67
SCN3B-203ENST00000527125 DSCC1Q9BVC3 393 aa10.85□□□□□ -0.67
SCN3B-203ENST00000527125 DDX21Q9NR30 783 aaKnown RBP eCLIP10.85□□□□□ -0.67
SCN3B-203ENST00000527125 KIAA1468Q9P260 1216 aa10.85□□□□□ -0.67
SCN3B-203ENST00000527125 A0A087WWV3 80 aa10.85□□□□□ -0.67
SCN3B-203ENST00000527125 NEURL1BA8MQ27 555 aa10.85□□□□□ -0.67
SCN3B-203ENST00000527125 MUM1L1Q5H9M0 696 aa10.85□□□□□ -0.67
SCN3B-203ENST00000527125 BICD2Q8TD16 824 aa10.85□□□□□ -0.67
SCN3B-203ENST00000527125 EDC3Q96F86 508 aaKnown RBP10.85□□□□□ -0.67
SCN3B-203ENST00000527125 BOLA2Q9H3K6 86 aa10.85□□□□□ -0.67
SCN3B-203ENST00000527125 POLR3EQ9NVU0 708 aa10.85□□□□□ -0.67
SCN3B-203ENST00000527125 HPSEQ9Y251 543 aa10.85□□□□□ -0.67
SCN3B-203ENST00000527125 PARP3Q9Y6F1 533 aa10.85□□□□□ -0.67
SCN3B-203ENST00000527125 BCL9LQ86UU0 1499 aa10.85□□□□□ -0.67
SCN3B-203ENST00000527125 BTBD11A6QL63 1104 aa10.84□□□□□ -0.67
SCN3B-203ENST00000527125 EIF2S2P20042 333 aaKnown RBP10.84□□□□□ -0.67
SCN3B-203ENST00000527125 NLRP6P59044 892 aa10.84□□□□□ -0.67
SCN3B-203ENST00000527125 DHX8Q14562 1220 aaKnown RBP10.84□□□□□ -0.67
SCN3B-203ENST00000527125 ERCC6LQ2NKX8 1250 aa10.84□□□□□ -0.67
SCN3B-203ENST00000527125 DPCR1Q3MIW9 517 aa10.84□□□□□ -0.67
SCN3B-203ENST00000527125 TNNI3KQ59H18 835 aa10.84□□□□□ -0.67
SCN3B-203ENST00000527125 ZNF771Q7L3S4 317 aaPredicted RBP10.84□□□□□ -0.67
SCN3B-203ENST00000527125 RSRC2Q7L4I2 434 aaKnown RBP10.84□□□□□ -0.67
SCN3B-203ENST00000527125 DHX32Q7L7V1 743 aaKnown RBP10.84□□□□□ -0.67
SCN3B-203ENST00000527125 DRC7Q8IY82 874 aa10.84□□□□□ -0.67
SCN3B-203ENST00000527125 AOPEPQ8N6M6 819 aa10.84□□□□□ -0.67
SCN3B-203ENST00000527125 USHBP1Q8N6Y0 703 aa10.84□□□□□ -0.67
SCN3B-203ENST00000527125 FPGT-TNNI3KV9GXZ4 949 aa10.84□□□□□ -0.67
SCN3B-203ENST00000527125 SHANK3Q9BYB0 1731 aa10.84□□□□□ -0.67
SCN3B-203ENST00000527125 PTPDC1A2A3K4 754 aa10.84□□□□□ -0.67
SCN3B-203ENST00000527125 PSME1Q06323 249 aa10.84□□□□□ -0.67
SCN3B-203ENST00000527125 BMS1Q14692 1282 aaKnown RBP10.84□□□□□ -0.67
SCN3B-203ENST00000527125 FCHSD1Q86WN1 690 aa10.84□□□□□ -0.67
SCN3B-203ENST00000527125 XPO4Q9C0E2 1151 aaKnown RBP10.84□□□□□ -0.67
SCN3B-203ENST00000527125 NHSL1Q5SYE7 1610 aa10.84□□□□□ -0.67
SCN3B-203ENST00000527125 HMGB1P09429 215 aaKnown RBP10.83□□□□□ -0.67
SCN3B-203ENST00000527125 PDIA3P30101 505 aaKnown RBP10.83□□□□□ -0.67
SCN3B-203ENST00000527125 STK3Q13188 491 aa10.83□□□□□ -0.67
SCN3B-203ENST00000527125 FSD1Q9BTV5 496 aa10.83□□□□□ -0.67
SCN3B-203ENST00000527125 NDUFA8P51970 172 aa10.83□□□□□ -0.68
SCN3B-203ENST00000527125 NLRP12P59046 1061 aa10.83□□□□□ -0.68
SCN3B-203ENST00000527125 GCKRQ14397 625 aa10.83□□□□□ -0.68
SCN3B-203ENST00000527125 MCMDC2Q4G0Z9 681 aa10.83□□□□□ -0.68
SCN3B-203ENST00000527125 PLCD3Q8N3E9 789 aa10.83□□□□□ -0.68
SCN3B-203ENST00000527125 MSL3Q8N5Y2 521 aaKnown RBP10.83□□□□□ -0.68
SCN3B-203ENST00000527125 SEC62Q99442 399 aaKnown RBP10.83□□□□□ -0.68
SCN3B-203ENST00000527125 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.83□□□□□ -0.68
SCN3B-203ENST00000527125 V9GYY5 206 aaPredicted RBP10.83□□□□□ -0.68
SCN3B-203ENST00000527125 BCORQ6W2J9 1755 aa10.83□□□□□ -0.68
SCN3B-203ENST00000527125 SASH3O75995 380 aa10.83□□□□□ -0.68
SCN3B-203ENST00000527125 TBC1D8O95759 1140 aa10.83□□□□□ -0.68
SCN3B-203ENST00000527125 ETF1P62495 437 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms