RNA–Protein interactions for RNA: ENST00000526943.1

CKAP5-207, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 4

Gene CKAP5, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-207ENST00000526943 C7orf43Q8WVR3 580 aa5.07□□□□□ -1.6
CKAP5-207ENST00000526943 ZNF516Q92618 1163 aa5.07□□□□□ -1.6
CKAP5-207ENST00000526943 TRIM56Q9BRZ2 755 aaKnown RBP5.07□□□□□ -1.6
CKAP5-207ENST00000526943 SRRTQ9BXP5 876 aaKnown RBP5.07□□□□□ -1.6
CKAP5-207ENST00000526943 PCGF6Q9BYE7 350 aa5.07□□□□□ -1.6
CKAP5-207ENST00000526943 NIFKQ9BYG3 293 aaKnown RBP5.07□□□□□ -1.6
CKAP5-207ENST00000526943 KRTAP9-9Q9BYP9 154 aa5.07□□□□□ -1.6
CKAP5-207ENST00000526943 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
CKAP5-207ENST00000526943 CHRDQ9H2X0 955 aa5.07□□□□□ -1.6
CKAP5-207ENST00000526943 GABBR1Q9UBS5 961 aa5.07□□□□□ -1.6
CKAP5-207ENST00000526943 GPC6Q9Y625 555 aaPredicted RBP5.07□□□□□ -1.6
CKAP5-207ENST00000526943 PARP3Q9Y6F1 533 aa5.07□□□□□ -1.6
CKAP5-207ENST00000526943 CLASP1Q7Z460 1538 aa5.07□□□□□ -1.6
CKAP5-207ENST00000526943 SMAD7O15105 426 aaKnown RBP5.06□□□□□ -1.6
CKAP5-207ENST00000526943 WIPF1O43516 503 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 IDH3AP50213 366 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 CENPCQ03188 943 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 ARID5BQ14865 1188 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 GRIN2CQ14957 1233 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 DDR2Q16832 855 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 CTC1Q2NKJ3 1217 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 KIAA0319Q5VV43 1072 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 THSD4Q6ZMP0 1018 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 FMNL3Q8IVF7 1028 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 SLITRK4Q8IW52 837 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 CELF2-AS1Q8N7Q2 184 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 EHBP1Q8NDI1 1231 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 PHC3Q8NDX5 983 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 CPLX3Q8WVH0 158 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 PMM1Q92871 262 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 RELTQ969Z4 430 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 EMID1Q96A84 441 aaPredicted RBP5.06□□□□□ -1.6
CKAP5-207ENST00000526943 ANAPC16Q96DE5 110 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 C8orf48Q96LL4 319 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 IER2Q9BTL4 223 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 PGPEP1Q9NXJ5 209 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 CNTN3Q9P232 1028 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 PRR12Q9ULL5 1215 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 TRAK1Q9UPV9 953 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.06□□□□□ -1.6
CKAP5-207ENST00000526943 KCNMB2Q9Y691 235 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 SNAPC4Q5SXM2 1469 aa5.06□□□□□ -1.6
CKAP5-207ENST00000526943 CCDC85CA6NKD9 419 aa5.05□□□□□ -1.6
CKAP5-207ENST00000526943 MINDY4BA8MYZ0 360 aa5.05□□□□□ -1.6
CKAP5-207ENST00000526943 PDPK1O15530 556 aa5.05□□□□□ -1.6
CKAP5-207ENST00000526943 WFS1O76024 890 aa5.05□□□□□ -1.6
CKAP5-207ENST00000526943 INPP5BP32019 993 aa5.05□□□□□ -1.6
CKAP5-207ENST00000526943 TXLNAP40222 546 aa5.05□□□□□ -1.6
CKAP5-207ENST00000526943 ARSDP51689 593 aa5.05□□□□□ -1.6
CKAP5-207ENST00000526943 C2orf27AQ580R0 203 aa5.05□□□□□ -1.6
CKAP5-207ENST00000526943 PRPF40BQ6NWY9 871 aaKnown RBP5.05□□□□□ -1.6
CKAP5-207ENST00000526943 SV2BQ7L1I2 683 aa5.05□□□□□ -1.6
CKAP5-207ENST00000526943 FERMT3Q86UX7 667 aa5.05□□□□□ -1.6
CKAP5-207ENST00000526943 PRPF38AQ8NAV1 312 aaKnown RBP5.05□□□□□ -1.6
CKAP5-207ENST00000526943 RHBDD1Q8TEB9 315 aa5.05□□□□□ -1.6
CKAP5-207ENST00000526943 CCDC136Q96JN2 1154 aa5.05□□□□□ -1.6
CKAP5-207ENST00000526943 ELP3Q9H9T3 547 aa5.05□□□□□ -1.6
CKAP5-207ENST00000526943 UBP1Q9NZI7 540 aa5.05□□□□□ -1.6
CKAP5-207ENST00000526943 TMEM63CQ9P1W3 806 aa5.05□□□□□ -1.6
CKAP5-207ENST00000526943 THRAP3Q9Y2W1 955 aaKnown RBP5.05□□□□□ -1.6
CKAP5-207ENST00000526943 TLL2Q9Y6L7 1015 aa5.05□□□□□ -1.6
CKAP5-207ENST00000526943 TARBP1Q13395 1621 aaKnown RBP5.05□□□□□ -1.6
CKAP5-207ENST00000526943 UBAP1LF5GYI3 381 aa5.04□□□□□ -1.6
CKAP5-207ENST00000526943 F6X3S4 739 aa5.04□□□□□ -1.6
CKAP5-207ENST00000526943 EREGO14944 169 aa5.04□□□□□ -1.6
CKAP5-207ENST00000526943 PRC1O43663 620 aa5.04□□□□□ -1.6
CKAP5-207ENST00000526943 POLR3DP05423 398 aaPredicted RBP5.04□□□□□ -1.6
CKAP5-207ENST00000526943 HCLS1P14317 486 aaPredicted RBP5.04□□□□□ -1.6
CKAP5-207ENST00000526943 GIPRP48546 466 aa5.04□□□□□ -1.6
CKAP5-207ENST00000526943 LMNB2Q03252 620 aa5.04□□□□□ -1.6
CKAP5-207ENST00000526943 APOBRQ0VD83 1088 aa5.04□□□□□ -1.6
CKAP5-207ENST00000526943 TKFCQ3LXA3 575 aa5.04□□□□□ -1.6
CKAP5-207ENST00000526943 TICAM2Q86XR7 235 aa5.04□□□□□ -1.6
CKAP5-207ENST00000526943 SYNPOQ8N3V7 929 aa5.04□□□□□ -1.6
CKAP5-207ENST00000526943 FAM169BQ8N8A8 192 aa5.04□□□□□ -1.6
CKAP5-207ENST00000526943 RHPN1Q8TCX5 695 aa5.04□□□□□ -1.6
CKAP5-207ENST00000526943 THAP3Q8WTV1 239 aaPredicted RBP5.04□□□□□ -1.6
CKAP5-207ENST00000526943 SGSM3Q96HU1 749 aa5.04□□□□□ -1.6
CKAP5-207ENST00000526943 SUSD3Q96L08 255 aa5.04□□□□□ -1.6
CKAP5-207ENST00000526943 ZSCAN10Q96SZ4 725 aaPredicted RBP5.04□□□□□ -1.6
CKAP5-207ENST00000526943 LRRC3Q9BY71 257 aa5.04□□□□□ -1.6
CKAP5-207ENST00000526943 HOMER2Q9NSB8 354 aa5.04□□□□□ -1.6
CKAP5-207ENST00000526943 ZDHHC3Q9NYG2 299 aa5.04□□□□□ -1.6
CKAP5-207ENST00000526943 MAPK8IP1Q9UQF2 711 aa5.04□□□□□ -1.6
CKAP5-207ENST00000526943 GAPVD1Q14C86 1478 aa5.04□□□□□ -1.6
CKAP5-207ENST00000526943 POLA1P09884 1462 aaPredicted RBP5.03□□□□□ -1.6
CKAP5-207ENST00000526943 SIAH2O43255 324 aa5.03□□□□□ -1.6
CKAP5-207ENST00000526943 KCNQ2O43526 872 aa5.03□□□□□ -1.6
CKAP5-207ENST00000526943 NR3C2P08235 984 aa5.03□□□□□ -1.6
CKAP5-207ENST00000526943 CRKP46108 304 aa5.03□□□□□ -1.6
CKAP5-207ENST00000526943 LIG3P49916 1009 aa5.03□□□□□ -1.6
CKAP5-207ENST00000526943 EXOSC10Q01780 885 aaKnown RBP5.03□□□□□ -1.6
CKAP5-207ENST00000526943 CCSAPQ6IQ19 270 aaPredicted RBP5.03□□□□□ -1.6
CKAP5-207ENST00000526943 FAM196AQ6ZSG2 479 aa5.03□□□□□ -1.6
CKAP5-207ENST00000526943 PGBD3Q8N328 593 aa5.03□□□□□ -1.6
CKAP5-207ENST00000526943 OR6P1Q8NGX9 317 aa5.03□□□□□ -1.6
CKAP5-207ENST00000526943 UBE2Q2Q8WVN8 375 aa5.03□□□□□ -1.6
CKAP5-207ENST00000526943 NKD1Q969G9 470 aa5.03□□□□□ -1.6
CKAP5-207ENST00000526943 PMEPA1Q969W9 287 aa5.03□□□□□ -1.6
CKAP5-207ENST00000526943 CEP89Q96ST8 783 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms