RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 HSPD1P10809 573 aaKnown RBP13.71□□□□□ -0.21
LINC01001-201ENST00000526704 TRIM5Q9C035 493 aa13.71□□□□□ -0.21
LINC01001-201ENST00000526704 GOLPH3LQ9H4A5 285 aa13.71□□□□□ -0.21
LINC01001-201ENST00000526704 NRBP1Q9UHY1 535 aa13.71□□□□□ -0.21
LINC01001-201ENST00000526704 DCCP43146 1447 aa13.71□□□□□ -0.22
LINC01001-201ENST00000526704 C4AP0C0L4 1744 aa13.71□□□□□ -0.22
LINC01001-201ENST00000526704 C4BP0C0L5 1744 aa13.71□□□□□ -0.22
LINC01001-201ENST00000526704 IL15P40933 162 aaPredicted RBP13.71□□□□□ -0.22
LINC01001-201ENST00000526704 LRMPQ12912 555 aa13.71□□□□□ -0.22
LINC01001-201ENST00000526704 LRRC24Q50LG9 513 aa13.71□□□□□ -0.22
LINC01001-201ENST00000526704 TICAM2Q86XR7 235 aa13.71□□□□□ -0.22
LINC01001-201ENST00000526704 PODXL2Q9NZ53 605 aa13.71□□□□□ -0.22
LINC01001-201ENST00000526704 RCOR1Q9UKL0 485 aa13.71□□□□□ -0.22
LINC01001-201ENST00000526704 KIF3AQ9Y496 699 aa13.71□□□□□ -0.22
LINC01001-201ENST00000526704 ECM29Q5VYK3 1845 aa13.7□□□□□ -0.22
LINC01001-201ENST00000526704 CCT2P78371 535 aaKnown RBP13.7□□□□□ -0.22
LINC01001-201ENST00000526704 ZNF594Q96JF6 807 aaPredicted RBP13.7□□□□□ -0.22
LINC01001-201ENST00000526704 ARID3AQ99856 593 aa13.7□□□□□ -0.22
LINC01001-201ENST00000526704 NCOA5Q9HCD5 579 aaKnown RBP13.7□□□□□ -0.22
LINC01001-201ENST00000526704 CPDO75976 1380 aa13.7□□□□□ -0.22
LINC01001-201ENST00000526704 FAM177BA6PVY3 158 aa13.7□□□□□ -0.22
LINC01001-201ENST00000526704 M0R2C6 588 aa13.7□□□□□ -0.22
LINC01001-201ENST00000526704 IQCB1Q15051 598 aa13.7□□□□□ -0.22
LINC01001-201ENST00000526704 C11orf57Q6ZUT1 292 aaPredicted RBP13.7□□□□□ -0.22
LINC01001-201ENST00000526704 ILDR1Q86SU0 546 aaPredicted RBP13.7□□□□□ -0.22
LINC01001-201ENST00000526704 USP28Q96RU2 1077 aa13.7□□□□□ -0.22
LINC01001-201ENST00000526704 TOGARAM1Q9Y4F4 1720 aa13.69□□□□□ -0.22
LINC01001-201ENST00000526704 EYA2O00167 538 aa13.69□□□□□ -0.22
LINC01001-201ENST00000526704 RNF113AO15541 343 aaKnown RBP13.69□□□□□ -0.22
LINC01001-201ENST00000526704 CAVIN2O95810 425 aa13.69□□□□□ -0.22
LINC01001-201ENST00000526704 ATF3P18847 181 aa13.69□□□□□ -0.22
LINC01001-201ENST00000526704 ZSCAN25Q6NSZ9 544 aa13.69□□□□□ -0.22
LINC01001-201ENST00000526704 CCAR1Q8IX12 1150 aaKnown RBP13.69□□□□□ -0.22
LINC01001-201ENST00000526704 DRC7Q8IY82 874 aa13.69□□□□□ -0.22
LINC01001-201ENST00000526704 CARMIL3Q8ND23 1372 aa13.69□□□□□ -0.22
LINC01001-201ENST00000526704 MYO5AQ9Y4I1 1855 aaKnown RBP13.69□□□□□ -0.22
LINC01001-201ENST00000526704 A0A1B0GUL7 405 aa13.69□□□□□ -0.22
LINC01001-201ENST00000526704 RIOK3O14730 519 aaKnown RBP13.69□□□□□ -0.22
LINC01001-201ENST00000526704 IFIT1P09914 478 aaKnown RBP13.69□□□□□ -0.22
LINC01001-201ENST00000526704 SNW1Q13573 536 aaKnown RBP13.69□□□□□ -0.22
LINC01001-201ENST00000526704 BCL2L12Q9HB09 334 aa13.69□□□□□ -0.22
LINC01001-201ENST00000526704 AKAP11Q9UKA4 1901 aa13.69□□□□□ -0.22
LINC01001-201ENST00000526704 PDIA3P30101 505 aaKnown RBP13.68□□□□□ -0.22
LINC01001-201ENST00000526704 CDC25BP30305 580 aa13.68□□□□□ -0.22
LINC01001-201ENST00000526704 CHST3Q7LGC8 479 aa13.68□□□□□ -0.22
LINC01001-201ENST00000526704 PPFIA3O75145 1194 aa13.68□□□□□ -0.22
LINC01001-201ENST00000526704 CIAO1O76071 339 aa13.68□□□□□ -0.22
LINC01001-201ENST00000526704 A1BGP04217 495 aa13.68□□□□□ -0.22
LINC01001-201ENST00000526704 STX1AQ16623 288 aa13.68□□□□□ -0.22
LINC01001-201ENST00000526704 CCDC144BQ3MJ40 725 aa13.68□□□□□ -0.22
LINC01001-201ENST00000526704 CCDC144CPQ8IYA2 1237 aa13.68□□□□□ -0.22
LINC01001-201ENST00000526704 ZNF274Q96GC6 653 aaPredicted RBP13.68□□□□□ -0.22
LINC01001-201ENST00000526704 CCDC94Q9BW85 323 aaPredicted RBP13.68□□□□□ -0.22
LINC01001-201ENST00000526704 PUS3Q9BZE2 481 aaKnown RBP13.68□□□□□ -0.22
LINC01001-201ENST00000526704 ZBTB3Q9H5J0 574 aa13.68□□□□□ -0.22
LINC01001-201ENST00000526704 CLIP2Q9UDT6 1046 aa13.68□□□□□ -0.22
LINC01001-201ENST00000526704 PRDM4Q9UKN5 801 aa13.68□□□□□ -0.22
LINC01001-201ENST00000526704 XIRP1Q702N8 1843 aaKnown RBP13.67□□□□□ -0.22
LINC01001-201ENST00000526704 CTAGE5O15320 804 aa13.67□□□□□ -0.22
LINC01001-201ENST00000526704 CHAF1AQ13111 956 aaPredicted RBP13.67□□□□□ -0.22
LINC01001-201ENST00000526704 TTLL5Q6EMB2 1281 aa13.67□□□□□ -0.22
LINC01001-201ENST00000526704 SARM1Q6SZW1 724 aa13.67□□□□□ -0.22
LINC01001-201ENST00000526704 CCDC191Q8NCU4 936 aa13.67□□□□□ -0.22
LINC01001-201ENST00000526704 ENGASEQ8NFI3 743 aa13.67□□□□□ -0.22
LINC01001-201ENST00000526704 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.67□□□□□ -0.22
LINC01001-201ENST00000526704 MYH3P11055 1940 aa13.67□□□□□ -0.22
LINC01001-201ENST00000526704 FOXP2O15409 715 aa13.67□□□□□ -0.22
LINC01001-201ENST00000526704 GUCY1B3Q02153 619 aa13.67□□□□□ -0.22
LINC01001-201ENST00000526704 ATL3Q6DD88 541 aa13.67□□□□□ -0.22
LINC01001-201ENST00000526704 OSBP2Q969R2 916 aa13.67□□□□□ -0.22
LINC01001-201ENST00000526704 ZNF396Q96N95 335 aaPredicted RBP13.67□□□□□ -0.22
LINC01001-201ENST00000526704 NAP1L2Q9ULW6 460 aaPredicted RBP13.67□□□□□ -0.22
LINC01001-201ENST00000526704 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.67□□□□□ -0.22
LINC01001-201ENST00000526704 PCDH11XQ9BZA7 1347 aa13.66□□□□□ -0.22
LINC01001-201ENST00000526704 PCDH11YQ9BZA8 1340 aa13.66□□□□□ -0.22
LINC01001-201ENST00000526704 TNS2Q63HR2 1409 aa13.66□□□□□ -0.22
LINC01001-201ENST00000526704 ABCA3Q99758 1704 aa13.66□□□□□ -0.22
LINC01001-201ENST00000526704 FDPSP14324 419 aaKnown RBP13.66□□□□□ -0.22
LINC01001-201ENST00000526704 FAM160A1Q05DH4 1040 aa13.66□□□□□ -0.22
LINC01001-201ENST00000526704 CCDC73Q6ZRK6 1079 aa13.66□□□□□ -0.22
LINC01001-201ENST00000526704 CACTINQ8WUQ7 758 aaKnown RBP13.66□□□□□ -0.22
LINC01001-201ENST00000526704 SPATA31A3Q5VYP0 1347 aa13.66□□□□□ -0.22
LINC01001-201ENST00000526704 FBXL16Q8N461 479 aa13.66□□□□□ -0.22
LINC01001-201ENST00000526704 ATG3Q9NT62 314 aa13.66□□□□□ -0.22
LINC01001-201ENST00000526704 A0A087WWV3 80 aa13.65□□□□□ -0.22
LINC01001-201ENST00000526704 CTIFO43310 598 aaKnown RBP13.65□□□□□ -0.22
LINC01001-201ENST00000526704 EVCP57679 992 aa13.65□□□□□ -0.22
LINC01001-201ENST00000526704 FSIP1Q8NA03 581 aa13.65□□□□□ -0.22
LINC01001-201ENST00000526704 GPHNQ9NQX3 736 aaPredicted RBP13.65□□□□□ -0.22
LINC01001-201ENST00000526704 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.65□□□□□ -0.22
LINC01001-201ENST00000526704 GOLGA6L19H0YKK7 550 aa13.65□□□□□ -0.22
LINC01001-201ENST00000526704 KINO60870 393 aaKnown RBP13.65□□□□□ -0.22
LINC01001-201ENST00000526704 ADORA1P30542 326 aa13.65□□□□□ -0.22
LINC01001-201ENST00000526704 DHX40Q8IX18 779 aaKnown RBP13.65□□□□□ -0.22
LINC01001-201ENST00000526704 CHD4Q14839 1912 aa13.65□□□□□ -0.22
LINC01001-201ENST00000526704 ANKRD36CQ5JPF3 1778 aa13.64□□□□□ -0.23
LINC01001-201ENST00000526704 MRFAP1L1Q96HT8 127 aa13.64□□□□□ -0.23
LINC01001-201ENST00000526704 C16orf45Q96MC5 204 aaPredicted RBP13.64□□□□□ -0.23
LINC01001-201ENST00000526704 ERVV-2B6SEH9 535 aa13.64□□□□□ -0.23
LINC01001-201ENST00000526704 ME1P48163 572 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms