RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 RRAGBQ5VZM2 374 aa9.53□□□□□ -0.88
CHD7-203ENST00000525508 CTNNBL1Q8WYA6 563 aaPredicted RBP9.53□□□□□ -0.88
CHD7-203ENST00000525508 METTL22Q9BUU2 404 aaPredicted RBP9.53□□□□□ -0.88
CHD7-203ENST00000525508 CCDC113Q9H0I3 377 aa9.53□□□□□ -0.88
CHD7-203ENST00000525508 ZSCAN16Q9H4T2 348 aaPredicted RBP9.53□□□□□ -0.88
CHD7-203ENST00000525508 ERLIN2O94905 339 aa9.53□□□□□ -0.88
CHD7-203ENST00000525508 LDHBP07195 334 aaKnown RBP9.53□□□□□ -0.88
CHD7-203ENST00000525508 NOP2P46087 812 aaKnown RBP9.53□□□□□ -0.88
CHD7-203ENST00000525508 PLS1Q14651 629 aa9.53□□□□□ -0.88
CHD7-203ENST00000525508 DHX32Q7L7V1 743 aaKnown RBP9.53□□□□□ -0.88
CHD7-203ENST00000525508 PDCL2Q8N4E4 241 aa9.53□□□□□ -0.88
CHD7-203ENST00000525508 AOPEPQ8N6M6 819 aa9.53□□□□□ -0.88
CHD7-203ENST00000525508 PRDM10Q9NQV6 1147 aa9.53□□□□□ -0.88
CHD7-203ENST00000525508 PIK3C2GO75747 1445 aa9.53□□□□□ -0.88
CHD7-203ENST00000525508 CCDC171Q6TFL3 1326 aa9.53□□□□□ -0.88
CHD7-203ENST00000525508 CCDC66A2RUB6 948 aa9.53□□□□□ -0.88
CHD7-203ENST00000525508 ARID5AQ03989 594 aa9.53□□□□□ -0.88
CHD7-203ENST00000525508 ZYXQ15942 572 aaKnown RBP9.53□□□□□ -0.88
CHD7-203ENST00000525508 TNNI3KQ59H18 835 aa9.53□□□□□ -0.88
CHD7-203ENST00000525508 CCDC12Q8WUD4 166 aaPredicted RBP9.53□□□□□ -0.88
CHD7-203ENST00000525508 XAGE2Q96GT9 111 aa9.53□□□□□ -0.88
CHD7-203ENST00000525508 DRC1Q96MC2 740 aa9.53□□□□□ -0.88
CHD7-203ENST00000525508 SLC52A2Q9HAB3 445 aa9.53□□□□□ -0.88
CHD7-203ENST00000525508 PUF60Q9UHX1 559 aaKnown RBP9.53□□□□□ -0.88
CHD7-203ENST00000525508 CLEC11AQ9Y240 323 aa9.53□□□□□ -0.88
CHD7-203ENST00000525508 FPGT-TNNI3KV9GXZ4 949 aa9.53□□□□□ -0.88
CHD7-203ENST00000525508 ABCC2Q92887 1545 aa9.53□□□□□ -0.88
CHD7-203ENST00000525508 TTC41PQ6P2S7 1318 aa9.52□□□□□ -0.88
CHD7-203ENST00000525508 A0A1B0GVL5 298 aa9.52□□□□□ -0.88
CHD7-203ENST00000525508 TMCO5BA8MYB1 307 aa9.52□□□□□ -0.88
CHD7-203ENST00000525508 KIF5CO60282 957 aa9.52□□□□□ -0.88
CHD7-203ENST00000525508 MCM7P33993 719 aa9.52□□□□□ -0.88
CHD7-203ENST00000525508 CBX1P83916 185 aa9.52□□□□□ -0.88
CHD7-203ENST00000525508 AKNAD1Q5T1N1 836 aa9.52□□□□□ -0.88
CHD7-203ENST00000525508 PLBD2Q8NHP8 589 aa9.52□□□□□ -0.88
CHD7-203ENST00000525508 MRPS27Q92552 414 aaKnown RBP9.52□□□□□ -0.88
CHD7-203ENST00000525508 PUS7Q96PZ0 661 aaKnown RBP9.52□□□□□ -0.88
CHD7-203ENST00000525508 PKD2L1Q9P0L9 805 aa9.52□□□□□ -0.88
CHD7-203ENST00000525508 ZBTB21Q9ULJ3 1066 aa9.52□□□□□ -0.88
CHD7-203ENST00000525508 SPTLC2O15270 562 aa9.52□□□□□ -0.89
CHD7-203ENST00000525508 UBASH3AP57075 661 aa9.52□□□□□ -0.89
CHD7-203ENST00000525508 ANAPC15P60006 121 aa9.52□□□□□ -0.89
CHD7-203ENST00000525508 TTLL7Q6ZT98 887 aa9.52□□□□□ -0.89
CHD7-203ENST00000525508 CNBD1Q8NA66 436 aa9.52□□□□□ -0.89
CHD7-203ENST00000525508 CALM1P0DP23 149 aa9.52□□□□□ -0.89
CHD7-203ENST00000525508 CALM2P0DP24 149 aa9.52□□□□□ -0.89
CHD7-203ENST00000525508 CALM3P0DP25 149 aa9.52□□□□□ -0.89
CHD7-203ENST00000525508 STAT6P42226 847 aa9.52□□□□□ -0.89
CHD7-203ENST00000525508 GCKRQ14397 625 aa9.52□□□□□ -0.89
CHD7-203ENST00000525508 SEPT7Q16181 437 aaKnown RBP9.52□□□□□ -0.89
CHD7-203ENST00000525508 TCOF1Q13428 1488 aaKnown RBP9.52□□□□□ -0.89
CHD7-203ENST00000525508 ERLIN1O75477 346 aa9.52□□□□□ -0.89
CHD7-203ENST00000525508 UFL1O94874 794 aa9.52□□□□□ -0.89
CHD7-203ENST00000525508 TRIM21P19474 475 aaKnown RBP9.52□□□□□ -0.89
CHD7-203ENST00000525508 SPECC1Q5M775 1068 aa9.52□□□□□ -0.89
CHD7-203ENST00000525508 ZNF804AQ7Z570 1209 aa9.52□□□□□ -0.89
CHD7-203ENST00000525508 CNNM2Q9H8M5 875 aa9.52□□□□□ -0.89
CHD7-203ENST00000525508 ERCC3P19447 782 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 EIF4A1P60842 406 aaKnown RBP9.51□□□□□ -0.89
CHD7-203ENST00000525508 GNG11P61952 73 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 RAB3GAP1Q15042 981 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.51□□□□□ -0.89
CHD7-203ENST00000525508 V9GYY5 206 aaPredicted RBP9.51□□□□□ -0.89
CHD7-203ENST00000525508 ADAMTS12P58397 1594 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 TRIM75PA6NK02 468 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 POLR3GO15318 223 aaPredicted RBP9.51□□□□□ -0.89
CHD7-203ENST00000525508 ZSCAN12O43309 604 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 ASIC1P78348 528 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 GSTO1P78417 241 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 MAPK8IP2Q13387 824 aaPredicted RBP9.51□□□□□ -0.89
CHD7-203ENST00000525508 LRSAM1Q6UWE0 723 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 RUFY3Q7L099 469 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 GPIHBP1Q8IV16 184 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 AATFQ9NY61 560 aaKnown RBP eCLIP9.51□□□□□ -0.89
CHD7-203ENST00000525508 PARP3Q9Y6F1 533 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 SBNO1A3KN83 1393 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 AKR1B10O60218 316 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 PRKG1Q13976 671 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 LEKR1Q6ZMV7 388 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 TMTC2Q8N394 836 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 GPAA1O43292 621 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 YEATS4O95619 227 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 ZAP70P43403 619 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 PPP4R3AQ6IN85 833 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 LUZP1Q86V48 1076 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 FNBP4Q8N3X1 1017 aaPredicted RBP9.51□□□□□ -0.89
CHD7-203ENST00000525508 CHAMP1Q96JM3 812 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 USP44Q9H0E7 712 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 MAPK8IP1Q9UQF2 711 aa9.51□□□□□ -0.89
CHD7-203ENST00000525508 COL17A1Q9UMD9 1497 aaPredicted RBP9.5□□□□□ -0.89
CHD7-203ENST00000525508 TCP10Q12799 353 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 TTC16Q8NEE8 873 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 CCDC148Q8NFR7 591 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 SEC62Q99442 399 aaKnown RBP9.5□□□□□ -0.89
CHD7-203ENST00000525508 GJA3Q9Y6H8 435 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 ITSN2Q9NZM3 1697 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 PTPRTO14522 1441 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 PRAMEF22A3QJZ6 481 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 TEX11Q8IYF3 940 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 KCNG4Q8TDN1 519 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms