RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 C9orf131Q5VYM1 1079 aa10.49□□□□□ -0.73
NEDD8-203ENST00000524927 ARHGAP27Q6ZUM4 889 aa10.49□□□□□ -0.73
NEDD8-203ENST00000524927 TOM1L2Q6ZVM7 507 aa10.49□□□□□ -0.73
NEDD8-203ENST00000524927 VASH1Q7L8A9 365 aaPredicted RBP10.49□□□□□ -0.73
NEDD8-203ENST00000524927 USTQ9Y2C2 406 aa10.49□□□□□ -0.73
NEDD8-203ENST00000524927 BTAF1O14981 1849 aa10.49□□□□□ -0.73
NEDD8-203ENST00000524927 SUZ12Q15022 739 aaKnown RBP10.48□□□□□ -0.73
NEDD8-203ENST00000524927 NGDNQ8NEJ9 315 aaKnown RBP10.48□□□□□ -0.73
NEDD8-203ENST00000524927 CUL9Q8IWT3 2517 aa10.47□□□□□ -0.73
NEDD8-203ENST00000524927 LZTS3O60299 673 aaPredicted RBP10.47□□□□□ -0.73
NEDD8-203ENST00000524927 EML3Q32P44 896 aa10.47□□□□□ -0.73
NEDD8-203ENST00000524927 RNF20Q5VTR2 975 aa10.47□□□□□ -0.73
NEDD8-203ENST00000524927 TRMT44Q8IYL2 757 aaKnown RBP10.47□□□□□ -0.73
NEDD8-203ENST00000524927 ACSBG1Q96GR2 724 aa10.47□□□□□ -0.73
NEDD8-203ENST00000524927 MAP4K5Q9Y4K4 846 aa10.47□□□□□ -0.73
NEDD8-203ENST00000524927 EIF3AQ14152 1382 aaKnown RBP10.47□□□□□ -0.73
NEDD8-203ENST00000524927 YTHDC2Q9H6S0 1430 aaKnown RBP10.47□□□□□ -0.73
NEDD8-203ENST00000524927 VEGFAP15692 232 aaPredicted RBP10.46□□□□□ -0.73
NEDD8-203ENST00000524927 KCNMA1Q12791 1236 aa10.46□□□□□ -0.73
NEDD8-203ENST00000524927 NBPF20Q3BBV1 942 aa10.46□□□□□ -0.73
NEDD8-203ENST00000524927 TSGA10IPQ3SY00 556 aa10.46□□□□□ -0.73
NEDD8-203ENST00000524927 CNTNAP3BQ96NU0 1288 aa10.46□□□□□ -0.73
NEDD8-203ENST00000524927 CNTNAP3Q9BZ76 1288 aa10.46□□□□□ -0.73
NEDD8-203ENST00000524927 DOLKQ9UPQ8 538 aa10.46□□□□□ -0.73
NEDD8-203ENST00000524927 PKD1L3Q7Z443 1732 aa10.45□□□□□ -0.74
NEDD8-203ENST00000524927 PIK3C2AO00443 1686 aa10.45□□□□□ -0.74
NEDD8-203ENST00000524927 CARNS1A5YM72 827 aa10.45□□□□□ -0.74
NEDD8-203ENST00000524927 ATP5J2-PTCD1G3V325 749 aa10.45□□□□□ -0.74
NEDD8-203ENST00000524927 UPP2O95045 317 aa10.45□□□□□ -0.74
NEDD8-203ENST00000524927 RASA1P20936 1047 aa10.45□□□□□ -0.74
NEDD8-203ENST00000524927 PTSQ03393 145 aa10.45□□□□□ -0.74
NEDD8-203ENST00000524927 NUTM2GQ5VZR2 741 aa10.45□□□□□ -0.74
NEDD8-203ENST00000524927 CCDC116Q8IYX3 515 aa10.45□□□□□ -0.74
NEDD8-203ENST00000524927 CDV3Q9UKY7 258 aaKnown RBP10.45□□□□□ -0.74
NEDD8-203ENST00000524927 PPLO60437 1756 aa10.44□□□□□ -0.74
NEDD8-203ENST00000524927 WDR17Q8IZU2 1322 aa10.44□□□□□ -0.74
NEDD8-203ENST00000524927 PITPNM2Q9BZ72 1349 aa10.44□□□□□ -0.74
NEDD8-203ENST00000524927 MAP2K1Q02750 393 aaPredicted RBP10.44□□□□□ -0.74
NEDD8-203ENST00000524927 OXLD1Q5BKU9 147 aa10.44□□□□□ -0.74
NEDD8-203ENST00000524927 RNFT1Q5M7Z0 435 aa10.44□□□□□ -0.74
NEDD8-203ENST00000524927 PPP1R26Q5T8A7 1209 aaPredicted RBP10.44□□□□□ -0.74
NEDD8-203ENST00000524927 TMEM132EQ6IEE7 984 aa10.44□□□□□ -0.74
NEDD8-203ENST00000524927 FLAD1Q8NFF5 587 aa10.44□□□□□ -0.74
NEDD8-203ENST00000524927 CCDC85AQ96PX6 553 aaPredicted RBP10.44□□□□□ -0.74
NEDD8-203ENST00000524927 TSEN34Q9BSV6 310 aaKnown RBP10.44□□□□□ -0.74
NEDD8-203ENST00000524927 BCS1LQ9Y276 419 aa10.44□□□□□ -0.74
NEDD8-203ENST00000524927 VPS8Q8N3P4 1428 aa10.43□□□□□ -0.74
NEDD8-203ENST00000524927 PRR36Q9H6K5 1346 aa10.43□□□□□ -0.74
NEDD8-203ENST00000524927 TTLL8A6PVC2 850 aa10.43□□□□□ -0.74
NEDD8-203ENST00000524927 RAB15P59190 212 aa10.43□□□□□ -0.74
NEDD8-203ENST00000524927 NOVA2Q9UNW9 492 aaKnown RBP10.43□□□□□ -0.74
NEDD8-203ENST00000524927 NOD1Q9Y239 953 aa10.43□□□□□ -0.74
NEDD8-203ENST00000524927 COL18A1P39060 1754 aa10.42□□□□□ -0.74
NEDD8-203ENST00000524927 GCP02774 474 aa10.42□□□□□ -0.74
NEDD8-203ENST00000524927 ELOAQ14241 798 aaKnown RBP10.42□□□□□ -0.74
NEDD8-203ENST00000524927 HABP4Q5JVS0 413 aaKnown RBP10.42□□□□□ -0.74
NEDD8-203ENST00000524927 TRIM50Q86XT4 487 aa10.42□□□□□ -0.74
NEDD8-203ENST00000524927 EMILIN1Q9Y6C2 1016 aa10.42□□□□□ -0.74
NEDD8-203ENST00000524927 FAM196BA6NMK8 535 aa10.41□□□□□ -0.74
NEDD8-203ENST00000524927 USP17L15C9J2P7 530 aa10.41□□□□□ -0.74
NEDD8-203ENST00000524927 USP17L10C9JJH3 530 aa10.41□□□□□ -0.74
NEDD8-203ENST00000524927 USP17L13C9JLJ4 530 aa10.41□□□□□ -0.74
NEDD8-203ENST00000524927 USP17L12C9JPN9 530 aa10.41□□□□□ -0.74
NEDD8-203ENST00000524927 USP17L11C9JVI0 530 aa10.41□□□□□ -0.74
NEDD8-203ENST00000524927 USP17L21D6R901 530 aa10.41□□□□□ -0.74
NEDD8-203ENST00000524927 USP17L18D6R9N7 530 aa10.41□□□□□ -0.74
NEDD8-203ENST00000524927 USP17L22D6RA61 530 aa10.41□□□□□ -0.74
NEDD8-203ENST00000524927 USP17L17D6RBQ6 530 aa10.41□□□□□ -0.74
NEDD8-203ENST00000524927 USP17L19D6RCP7 530 aa10.41□□□□□ -0.74
NEDD8-203ENST00000524927 USP17L20D6RJB6 530 aa10.41□□□□□ -0.74
NEDD8-203ENST00000524927 USP17L24Q0WX57 530 aa10.41□□□□□ -0.74
NEDD8-203ENST00000524927 CRTC2Q53ET0 693 aaPredicted RBP10.41□□□□□ -0.74
NEDD8-203ENST00000524927 Q6ZVU0 165 aa10.41□□□□□ -0.74
NEDD8-203ENST00000524927 WHAMMQ8TF30 809 aa10.41□□□□□ -0.74
NEDD8-203ENST00000524927 KCTD15Q96SI1 283 aaPredicted RBP10.41□□□□□ -0.74
NEDD8-203ENST00000524927 CARD10Q9BWT7 1032 aa10.41□□□□□ -0.74
NEDD8-203ENST00000524927 COL25A1Q9BXS0 654 aaPredicted RBP10.41□□□□□ -0.74
NEDD8-203ENST00000524927 MCOLN1Q9GZU1 580 aa10.41□□□□□ -0.74
NEDD8-203ENST00000524927 ADAMTS8Q9UP79 889 aa10.41□□□□□ -0.74
NEDD8-203ENST00000524927 PCDHB11Q9Y5F2 797 aa10.41□□□□□ -0.74
NEDD8-203ENST00000524927 VIRMAQ69YN4 1812 aaKnown RBP10.41□□□□□ -0.74
NEDD8-203ENST00000524927 ABCC6O95255 1503 aa10.41□□□□□ -0.74
NEDD8-203ENST00000524927 ADGRF5Q8IZF2 1346 aa10.4□□□□□ -0.74
NEDD8-203ENST00000524927 ATP1A2P50993 1020 aa10.4□□□□□ -0.74
NEDD8-203ENST00000524927 KCNQ4P56696 695 aa10.4□□□□□ -0.74
NEDD8-203ENST00000524927 TGFB2P61812 414 aa10.4□□□□□ -0.74
NEDD8-203ENST00000524927 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.4□□□□□ -0.741e-17■□□□□ 9.3
NEDD8-203ENST00000524927 AGBL1Q96MI9 1066 aa10.4□□□□□ -0.74
NEDD8-203ENST00000524927 PRAM1Q96QH2 718 aa10.4□□□□□ -0.74
NEDD8-203ENST00000524927 RNF181Q9P0P0 153 aa10.4□□□□□ -0.74
NEDD8-203ENST00000524927 TMEM88BA6NKF7 163 aa10.39□□□□□ -0.75
NEDD8-203ENST00000524927 ESPNB1AK53 854 aa10.39□□□□□ -0.75
NEDD8-203ENST00000524927 SPINT1O43278 529 aa10.39□□□□□ -0.75
NEDD8-203ENST00000524927 HMGB2P26583 209 aaKnown RBP10.39□□□□□ -0.75
NEDD8-203ENST00000524927 OGFOD1Q8N543 542 aa10.39□□□□□ -0.75
NEDD8-203ENST00000524927 CCDC155Q8N6L0 562 aa10.39□□□□□ -0.75
NEDD8-203ENST00000524927 FAM200AQ8TCP9 573 aa10.39□□□□□ -0.75
NEDD8-203ENST00000524927 STK32AQ8WU08 396 aa10.39□□□□□ -0.75
NEDD8-203ENST00000524927 DNAAF2Q9NVR5 837 aaKnown RBP10.39□□□□□ -0.75
NEDD8-203ENST00000524927 ZMIZ1Q9ULJ6 1067 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms