RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 BBXQ8WY36 941 aaPredicted RBP15.39■□□□□ 0.05
CAPN1-202ENST00000524773 ATP1A3P13637 1013 aa15.39■□□□□ 0.05
CAPN1-202ENST00000524773 TIMM10P62072 90 aa15.39■□□□□ 0.05
CAPN1-202ENST00000524773 PXDNQ92626 1479 aa15.39■□□□□ 0.05
CAPN1-202ENST00000524773 ENGASEQ8NFI3 743 aa15.38■□□□□ 0.05
CAPN1-202ENST00000524773 RCOR1Q9UKL0 485 aa15.38■□□□□ 0.05
CAPN1-202ENST00000524773 ADGRL3Q9HAR2 1447 aa15.38■□□□□ 0.05
CAPN1-202ENST00000524773 POLR3GO15318 223 aaPredicted RBP15.38■□□□□ 0.05
CAPN1-202ENST00000524773 SLU7O95391 586 aaKnown RBP15.38■□□□□ 0.05
CAPN1-202ENST00000524773 PDIA6Q15084 440 aa15.38■□□□□ 0.05
CAPN1-202ENST00000524773 TNNI3KQ59H18 835 aa15.38■□□□□ 0.05
CAPN1-202ENST00000524773 PPP1R13BQ96KQ4 1090 aa15.38■□□□□ 0.05
CAPN1-202ENST00000524773 FPGT-TNNI3KV9GXZ4 949 aa15.38■□□□□ 0.05
CAPN1-202ENST00000524773 CRYBG1Q9Y4K1 1723 aa15.38■□□□□ 0.05
CAPN1-202ENST00000524773 ESCO1Q5FWF5 840 aa15.37■□□□□ 0.05
CAPN1-202ENST00000524773 HOMER1Q86YM7 354 aa15.37■□□□□ 0.05
CAPN1-202ENST00000524773 CEP57L1Q8IYX8 460 aa15.37■□□□□ 0.05
CAPN1-202ENST00000524773 NEURL1BA8MQ27 555 aa15.37■□□□□ 0.05
CAPN1-202ENST00000524773 SEC31AO94979 1220 aaKnown RBP15.37■□□□□ 0.05
CAPN1-202ENST00000524773 FAM160A1Q05DH4 1040 aa15.37■□□□□ 0.05
CAPN1-202ENST00000524773 AKAP4Q5JQC9 854 aa15.37■□□□□ 0.05
CAPN1-202ENST00000524773 SARM1Q6SZW1 724 aa15.37■□□□□ 0.05
CAPN1-202ENST00000524773 IP6K1Q92551 441 aa15.37■□□□□ 0.05
CAPN1-202ENST00000524773 ANO10Q9NW15 660 aa15.37■□□□□ 0.05
CAPN1-202ENST00000524773 HMG20BQ9P0W2 317 aa15.37■□□□□ 0.05
CAPN1-202ENST00000524773 MARCKSP29966 332 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-202ENST00000524773 CDC25BP30305 580 aa15.36■□□□□ 0.05
CAPN1-202ENST00000524773 SF3A1Q15459 793 aaKnown RBP15.36■□□□□ 0.05
CAPN1-202ENST00000524773 PROSER2Q86WR7 435 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-202ENST00000524773 ZSCAN16Q9H4T2 348 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-202ENST00000524773 N4BP2Q86UW6 1770 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-202ENST00000524773 MCMDC2Q4G0Z9 681 aa15.36■□□□□ 0.05
CAPN1-202ENST00000524773 DNAI1Q9UI46 699 aa15.36■□□□□ 0.05
CAPN1-202ENST00000524773 FANCGO15287 622 aa15.36■□□□□ 0.05
CAPN1-202ENST00000524773 PTPN12Q05209 780 aaKnown RBP15.36■□□□□ 0.05
CAPN1-202ENST00000524773 GCKRQ14397 625 aa15.36■□□□□ 0.05
CAPN1-202ENST00000524773 ARHGAP29Q52LW3 1261 aa15.36■□□□□ 0.05
CAPN1-202ENST00000524773 USPL1Q5W0Q7 1092 aa15.36■□□□□ 0.05
CAPN1-202ENST00000524773 ERO1AQ96HE7 468 aa15.36■□□□□ 0.05
CAPN1-202ENST00000524773 SNRKQ9NRH2 765 aa15.36■□□□□ 0.05
CAPN1-202ENST00000524773 FDPSP14324 419 aaKnown RBP15.35■□□□□ 0.05
CAPN1-202ENST00000524773 CLCN6P51797 869 aa15.35■□□□□ 0.05
CAPN1-202ENST00000524773 SYCP1Q15431 976 aa15.35■□□□□ 0.05
CAPN1-202ENST00000524773 PLEKHO1Q53GL0 409 aaPredicted RBP15.35■□□□□ 0.05
CAPN1-202ENST00000524773 SMARCC2Q8TAQ2 1214 aa15.35■□□□□ 0.05
CAPN1-202ENST00000524773 DPF2Q92785 391 aa15.35■□□□□ 0.05
CAPN1-202ENST00000524773 PFKFB2O60825 505 aa15.35■□□□□ 0.05
CAPN1-202ENST00000524773 GABPB1Q06547 395 aaPredicted RBP15.35■□□□□ 0.05
CAPN1-202ENST00000524773 ZCCHC17Q9NP64 241 aaKnown RBP15.35■□□□□ 0.05
CAPN1-202ENST00000524773 RXRAP19793 462 aa15.34■□□□□ 0.05
CAPN1-202ENST00000524773 PSME1Q06323 249 aa15.34■□□□□ 0.05
CAPN1-202ENST00000524773 DHX32Q7L7V1 743 aaKnown RBP15.34■□□□□ 0.05
CAPN1-202ENST00000524773 FMR1NBQ8N0W7 255 aaPredicted RBP15.34■□□□□ 0.05
CAPN1-202ENST00000524773 ZNF594Q96JF6 807 aaPredicted RBP15.34■□□□□ 0.05
CAPN1-202ENST00000524773 AIFM3Q96NN9 605 aa15.34■□□□□ 0.05
CAPN1-202ENST00000524773 AXIN2Q9Y2T1 843 aa15.34■□□□□ 0.05
CAPN1-202ENST00000524773 HOXB7P09629 217 aa15.34■□□□□ 0.05
CAPN1-202ENST00000524773 PDIA3P30101 505 aaKnown RBP15.34■□□□□ 0.05
CAPN1-202ENST00000524773 KRT32Q14532 448 aa15.34■□□□□ 0.05
CAPN1-202ENST00000524773 STK38Q15208 465 aa15.34■□□□□ 0.05
CAPN1-202ENST00000524773 ZRSR1Q15695 479 aaKnown RBP15.34■□□□□ 0.05
CAPN1-202ENST00000524773 CCDC85AQ96PX6 553 aaPredicted RBP15.34■□□□□ 0.05
CAPN1-202ENST00000524773 DENND2AQ9ULE3 1009 aa15.34■□□□□ 0.05
CAPN1-202ENST00000524773 E7EWF7 191 aa15.33■□□□□ 0.05
CAPN1-202ENST00000524773 GTF2E1P29083 439 aaPredicted RBP15.33■□□□□ 0.05
CAPN1-202ENST00000524773 TSGA10IPQ3SY00 556 aa15.33■□□□□ 0.05
CAPN1-202ENST00000524773 NFATC2IPQ8NCF5 419 aa15.33■□□□□ 0.05
CAPN1-202ENST00000524773 MRPS27Q92552 414 aaKnown RBP15.33■□□□□ 0.05
CAPN1-202ENST00000524773 TMEM51Q9NW97 253 aa15.33■□□□□ 0.05
CAPN1-202ENST00000524773 U3KPZ7 1027 aaPredicted RBP15.33■□□□□ 0.05
CAPN1-202ENST00000524773 DDX58O95786 925 aaKnown RBP15.33■□□□□ 0.04
CAPN1-202ENST00000524773 ATP5JP18859 108 aa15.33■□□□□ 0.04
CAPN1-202ENST00000524773 DDX21Q9NR30 783 aaKnown RBP eCLIP15.33■□□□□ 0.04
CAPN1-202ENST00000524773 SFPQP23246 707 aaKnown RBP eCLIP15.33■□□□□ 0.04
CAPN1-202ENST00000524773 NEXNQ0ZGT2 675 aa15.33■□□□□ 0.04
CAPN1-202ENST00000524773 ZFP91Q96JP5 570 aaPredicted RBP15.33■□□□□ 0.04
CAPN1-202ENST00000524773 KIF28PB7ZC32 967 aa15.32■□□□□ 0.04
CAPN1-202ENST00000524773 TMEM232C9JQI7 657 aa15.32■□□□□ 0.04
CAPN1-202ENST00000524773 GYS2P54840 703 aa15.32■□□□□ 0.04
CAPN1-202ENST00000524773 ALDH8A1Q9H2A2 487 aaPredicted RBP15.32■□□□□ 0.04
CAPN1-202ENST00000524773 URI1O94763 535 aaPredicted RBP15.32■□□□□ 0.04
CAPN1-202ENST00000524773 LMBR1LQ6UX01 489 aa15.32■□□□□ 0.04
CAPN1-202ENST00000524773 KIAA1468Q9P260 1216 aa15.32■□□□□ 0.04
CAPN1-202ENST00000524773 FHOD1Q9Y613 1164 aa15.32■□□□□ 0.04
CAPN1-202ENST00000524773 A0A087WZG4 1122 aa15.31■□□□□ 0.04
CAPN1-202ENST00000524773 RFX5P48382 616 aaPredicted RBP15.31■□□□□ 0.04
CAPN1-202ENST00000524773 NEK11Q8NG66 645 aa15.31■□□□□ 0.04
CAPN1-202ENST00000524773 UTP14AQ9BVJ6 771 aaKnown RBP15.31■□□□□ 0.04
CAPN1-202ENST00000524773 RGPD2P0DJD1 1756 aa15.31■□□□□ 0.04
CAPN1-202ENST00000524773 UBE2Q2LH0YL09 131 aa15.31■□□□□ 0.04
CAPN1-202ENST00000524773 CTAGE5O15320 804 aa15.31■□□□□ 0.04
CAPN1-202ENST00000524773 PDIA4P13667 645 aaKnown RBP15.31■□□□□ 0.04
CAPN1-202ENST00000524773 HSPA2P54652 639 aa15.31■□□□□ 0.04
CAPN1-202ENST00000524773 SPECC1Q5M775 1068 aa15.31■□□□□ 0.04
CAPN1-202ENST00000524773 NKX2-3Q8TAU0 364 aa15.31■□□□□ 0.04
CAPN1-202ENST00000524773 CCDC34Q96HJ3 373 aa15.31■□□□□ 0.04
CAPN1-202ENST00000524773 ZNF396Q96N95 335 aaPredicted RBP15.31■□□□□ 0.04
CAPN1-202ENST00000524773 ORAI2Q96SN7 254 aa15.31■□□□□ 0.04
CAPN1-202ENST00000524773 CARMIL3Q8ND23 1372 aa15.31■□□□□ 0.04
CAPN1-202ENST00000524773 HSPD1P10809 573 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms