RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 SLC51AQ86UW1 340 aa13.97□□□□□ -0.17
PTPRK-216ENST00000524481 AIDAQ96BJ3 306 aa13.97□□□□□ -0.17
PTPRK-216ENST00000524481 GJD4Q96KN9 370 aaPredicted RBP13.97□□□□□ -0.17
PTPRK-216ENST00000524481 ZSWIM6Q9HCJ5 1215 aa13.97□□□□□ -0.17
PTPRK-216ENST00000524481 H3BQV1 296 aa13.96□□□□□ -0.17
PTPRK-216ENST00000524481 STX6O43752 255 aa13.96□□□□□ -0.17
PTPRK-216ENST00000524481 SLC5A1P13866 664 aa13.96□□□□□ -0.17
PTPRK-216ENST00000524481 IFFO2Q5TF58 517 aa13.96□□□□□ -0.17
PTPRK-216ENST00000524481 U3KPZ7 1027 aaPredicted RBP13.96□□□□□ -0.17
PTPRK-216ENST00000524481 ZNF609O15014 1411 aa13.96□□□□□ -0.17
PTPRK-216ENST00000524481 GPAA1O43292 621 aa13.96□□□□□ -0.17
PTPRK-216ENST00000524481 CYP2E1P05181 493 aaPredicted RBP13.96□□□□□ -0.17
PTPRK-216ENST00000524481 CHRNDQ07001 517 aa13.96□□□□□ -0.17
PTPRK-216ENST00000524481 VPS72Q15906 364 aa13.96□□□□□ -0.17
PTPRK-216ENST00000524481 RALYLQ86SE5 291 aaKnown RBP13.96□□□□□ -0.17
PTPRK-216ENST00000524481 ANKRD18AQ8IVF6 992 aa13.96□□□□□ -0.17
PTPRK-216ENST00000524481 PIH1D3Q9NQM4 214 aaKnown RBP13.96□□□□□ -0.17
PTPRK-216ENST00000524481 WWC3Q9ULE0 1092 aa13.96□□□□□ -0.17
PTPRK-216ENST00000524481 UTRNP46939 3433 aa13.96□□□□□ -0.18
PTPRK-216ENST00000524481 CIAO1O76071 339 aa13.95□□□□□ -0.18
PTPRK-216ENST00000524481 RPS6KB1P23443 525 aa13.95□□□□□ -0.18
PTPRK-216ENST00000524481 CELF1Q92879 486 aaKnown RBP13.95□□□□□ -0.18
PTPRK-216ENST00000524481 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.95□□□□□ -0.18
PTPRK-216ENST00000524481 DENND2AQ9ULE3 1009 aa13.95□□□□□ -0.18
PTPRK-216ENST00000524481 MRC1P22897 1456 aa13.95□□□□□ -0.18
PTPRK-216ENST00000524481 MINDY4BA8MYZ0 360 aa13.95□□□□□ -0.18
PTPRK-216ENST00000524481 GADD45BO75293 160 aaPredicted RBP13.95□□□□□ -0.18
PTPRK-216ENST00000524481 FGAP02671 866 aa13.95□□□□□ -0.18
PTPRK-216ENST00000524481 CERKQ8TCT0 537 aa13.95□□□□□ -0.18
PTPRK-216ENST00000524481 ARHGEF1Q92888 912 aaKnown RBP13.95□□□□□ -0.18
PTPRK-216ENST00000524481 TTC14Q96N46 770 aa13.95□□□□□ -0.18
PTPRK-216ENST00000524481 NLRP3Q96P20 1036 aa13.95□□□□□ -0.18
PTPRK-216ENST00000524481 ZNF532Q9HCE3 1301 aa13.95□□□□□ -0.18
PTPRK-216ENST00000524481 ZNF213O14771 459 aa13.95□□□□□ -0.18
PTPRK-216ENST00000524481 PUM3Q15397 648 aaKnown RBP13.95□□□□□ -0.18
PTPRK-216ENST00000524481 BARGINQ6ZT62 677 aa13.95□□□□□ -0.18
PTPRK-216ENST00000524481 GPR101Q96P66 508 aaPredicted RBP13.95□□□□□ -0.18
PTPRK-216ENST00000524481 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.95□□□□□ -0.18
PTPRK-216ENST00000524481 ANKIB1Q9P2G1 1089 aa13.95□□□□□ -0.18
PTPRK-216ENST00000524481 COL15A1P39059 1388 aa13.95□□□□□ -0.18
PTPRK-216ENST00000524481 DNM1Q05193 864 aaKnown RBP13.94□□□□□ -0.18
PTPRK-216ENST00000524481 STOX1Q6ZVD7 989 aa13.94□□□□□ -0.18
PTPRK-216ENST00000524481 ARMT1Q9H993 441 aa13.94□□□□□ -0.18
PTPRK-216ENST00000524481 SYCE3A1L190 88 aa13.94□□□□□ -0.18
PTPRK-216ENST00000524481 TRAPPC3LQ5T215 181 aa13.94□□□□□ -0.18
PTPRK-216ENST00000524481 GAS2L3Q86XJ1 694 aa13.94□□□□□ -0.18
PTPRK-216ENST00000524481 MPNDQ8N594 471 aa13.94□□□□□ -0.18
PTPRK-216ENST00000524481 WDR33Q9C0J8 1336 aaKnown RBP13.94□□□□□ -0.18
PTPRK-216ENST00000524481 RASGRF1Q13972 1273 aa13.93□□□□□ -0.18
PTPRK-216ENST00000524481 IMMTQ16891 758 aaKnown RBP13.93□□□□□ -0.18
PTPRK-216ENST00000524481 LRRFIP1Q32MZ4 808 aaKnown RBP13.93□□□□□ -0.18
PTPRK-216ENST00000524481 LPIN2Q92539 896 aa13.93□□□□□ -0.18
PTPRK-216ENST00000524481 ZKSCAN3Q9BRR0 538 aa13.93□□□□□ -0.18
PTPRK-216ENST00000524481 HMG20BQ9P0W2 317 aa13.93□□□□□ -0.18
PTPRK-216ENST00000524481 ZNF219Q9P2Y4 722 aaPredicted RBP13.93□□□□□ -0.18
PTPRK-216ENST00000524481 MTMR7Q9Y216 660 aa13.93□□□□□ -0.18
PTPRK-216ENST00000524481 JCADQ9P266 1359 aa13.93□□□□□ -0.18
PTPRK-216ENST00000524481 TRDNQ13061 729 aa13.93□□□□□ -0.18
PTPRK-216ENST00000524481 PARP10Q53GL7 1025 aa13.93□□□□□ -0.18
PTPRK-216ENST00000524481 ZMYM1Q5SVZ6 1142 aa13.93□□□□□ -0.18
PTPRK-216ENST00000524481 USP48Q86UV5 1035 aa13.93□□□□□ -0.18
PTPRK-216ENST00000524481 SPATA5Q8NB90 893 aa13.93□□□□□ -0.18
PTPRK-216ENST00000524481 FBXW7Q969H0 707 aa13.93□□□□□ -0.18
PTPRK-216ENST00000524481 CDC5LQ99459 802 aaKnown RBP13.93□□□□□ -0.18
PTPRK-216ENST00000524481 TNS2Q63HR2 1409 aa13.93□□□□□ -0.18
PTPRK-216ENST00000524481 GOLGA6L4A6NEF3 574 aa13.93□□□□□ -0.18
PTPRK-216ENST00000524481 E7EWF7 191 aa13.93□□□□□ -0.18
PTPRK-216ENST00000524481 PRKAB2O43741 272 aa13.93□□□□□ -0.18
PTPRK-216ENST00000524481 AFDNP55196 1824 aaKnown RBP13.93□□□□□ -0.18
PTPRK-216ENST00000524481 CUL4AQ13619 759 aa13.93□□□□□ -0.18
PTPRK-216ENST00000524481 LMBRD1Q9NUN5 540 aa13.93□□□□□ -0.18
PTPRK-216ENST00000524481 XRCC6P12956 609 aaKnown RBP eCLIP13.92□□□□□ -0.18
PTPRK-216ENST00000524481 SKOR2Q2VWA4 1001 aaPredicted RBP13.92□□□□□ -0.18
PTPRK-216ENST00000524481 TPTE2Q6XPS3 522 aa13.92□□□□□ -0.18
PTPRK-216ENST00000524481 NFXL1Q6ZNB6 911 aa13.92□□□□□ -0.18
PTPRK-216ENST00000524481 TDO2P48775 406 aa13.92□□□□□ -0.18
PTPRK-216ENST00000524481 DISP2A7MBM2 1401 aa13.92□□□□□ -0.18
PTPRK-216ENST00000524481 SIPA1L3O60292 1781 aaPredicted RBP13.92□□□□□ -0.18
PTPRK-216ENST00000524481 PARP4Q9UKK3 1724 aaKnown RBP13.91□□□□□ -0.18
PTPRK-216ENST00000524481 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.91□□□□□ -0.18
PTPRK-216ENST00000524481 MBD4O95243 580 aa13.91□□□□□ -0.18
PTPRK-216ENST00000524481 NTSR2O95665 410 aa13.91□□□□□ -0.18
PTPRK-216ENST00000524481 MAP3K12Q12852 859 aa13.91□□□□□ -0.18
PTPRK-216ENST00000524481 TOB2Q14106 344 aaPredicted RBP13.91□□□□□ -0.18
PTPRK-216ENST00000524481 KRT32Q14532 448 aa13.91□□□□□ -0.18
PTPRK-216ENST00000524481 OTUD7BQ6GQQ9 843 aa13.91□□□□□ -0.18
PTPRK-216ENST00000524481 GPR108Q9NPR9 543 aa13.91□□□□□ -0.18
PTPRK-216ENST00000524481 HELLSQ9NRZ9 838 aa13.91□□□□□ -0.18
PTPRK-216ENST00000524481 BRD1O95696 1058 aa13.91□□□□□ -0.18
PTPRK-216ENST00000524481 CTDSPL2Q05D32 466 aa13.91□□□□□ -0.18
PTPRK-216ENST00000524481 ZSCAN31Q96LW9 406 aaPredicted RBP13.91□□□□□ -0.18
PTPRK-216ENST00000524481 CPLX1O14810 134 aa13.91□□□□□ -0.18
PTPRK-216ENST00000524481 ZSCAN22P10073 491 aaPredicted RBP13.91□□□□□ -0.18
PTPRK-216ENST00000524481 APPBP2Q92624 585 aa13.91□□□□□ -0.18
PTPRK-216ENST00000524481 INTS4Q96HW7 963 aaKnown RBP13.91□□□□□ -0.18
PTPRK-216ENST00000524481 MYL10Q9BUA6 226 aa13.91□□□□□ -0.18
PTPRK-216ENST00000524481 PHLPP1O60346 1717 aa13.9□□□□□ -0.18
PTPRK-216ENST00000524481 PDE6AP16499 860 aa13.9□□□□□ -0.18
PTPRK-216ENST00000524481 CYP7A1P22680 504 aa13.9□□□□□ -0.18
PTPRK-216ENST00000524481 KLRK1P26718 216 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms