RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.01■□□□□ 0.95
IKBKB-228ENST00000523517 ZCRB1Q8TBF4 217 aaKnown RBP21.01■□□□□ 0.95
IKBKB-228ENST00000523517 ZNF274Q96GC6 653 aaPredicted RBP21.01■□□□□ 0.95
IKBKB-228ENST00000523517 PCDH11XQ9BZA7 1347 aa21■□□□□ 0.95
IKBKB-228ENST00000523517 PCDH11YQ9BZA8 1340 aa21■□□□□ 0.95
IKBKB-228ENST00000523517 ERVV-2B6SEH9 535 aa21■□□□□ 0.95
IKBKB-228ENST00000523517 PDIA3P30101 505 aaKnown RBP21■□□□□ 0.95
IKBKB-228ENST00000523517 CCDC186Q7Z3E2 898 aa21■□□□□ 0.95
IKBKB-228ENST00000523517 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21■□□□□ 0.95
IKBKB-228ENST00000523517 SALL1Q9NSC2 1324 aa21■□□□□ 0.95
IKBKB-228ENST00000523517 LAMB4A4D0S4 1761 aa21■□□□□ 0.95
IKBKB-228ENST00000523517 ATL3Q6DD88 541 aa21■□□□□ 0.95
IKBKB-228ENST00000523517 CCAR1Q8IX12 1150 aaKnown RBP21■□□□□ 0.95
IKBKB-228ENST00000523517 DRC7Q8IY82 874 aa21■□□□□ 0.95
IKBKB-228ENST00000523517 PUS3Q9BZE2 481 aaKnown RBP21■□□□□ 0.95
IKBKB-228ENST00000523517 FTOQ9C0B1 505 aaKnown RBP eCLIP21■□□□□ 0.95
IKBKB-228ENST00000523517 NCOA5Q9HCD5 579 aaKnown RBP21■□□□□ 0.95
IKBKB-228ENST00000523517 M0R2C6 588 aa20.99■□□□□ 0.95
IKBKB-228ENST00000523517 NAP1L2Q9ULW6 460 aaPredicted RBP20.99■□□□□ 0.95
IKBKB-228ENST00000523517 CTAGE5O15320 804 aa20.99■□□□□ 0.95
IKBKB-228ENST00000523517 CADPS2Q86UW7 1296 aa20.99■□□□□ 0.95
IKBKB-228ENST00000523517 ZNF396Q96N95 335 aaPredicted RBP20.99■□□□□ 0.95
IKBKB-228ENST00000523517 USP28Q96RU2 1077 aa20.99■□□□□ 0.95
IKBKB-228ENST00000523517 CHST3Q7LGC8 479 aa20.98■□□□□ 0.95
IKBKB-228ENST00000523517 CHMP4CQ96CF2 233 aa20.98■□□□□ 0.95
IKBKB-228ENST00000523517 CEP126Q9P2H0 1117 aa20.98■□□□□ 0.95
IKBKB-228ENST00000523517 TTLL5Q6EMB2 1281 aa20.97■□□□□ 0.95
IKBKB-228ENST00000523517 OSBP2Q969R2 916 aa20.97■□□□□ 0.95
IKBKB-228ENST00000523517 GOLPH3LQ9H4A5 285 aa20.97■□□□□ 0.95
IKBKB-228ENST00000523517 TSC1Q92574 1164 aa20.97■□□□□ 0.95
IKBKB-228ENST00000523517 NRBP1Q9UHY1 535 aa20.97■□□□□ 0.95
IKBKB-228ENST00000523517 PARP4Q9UKK3 1724 aaKnown RBP20.97■□□□□ 0.95
IKBKB-228ENST00000523517 FKBP4Q02790 459 aaKnown RBP eCLIP20.96■□□□□ 0.95
IKBKB-228ENST00000523517 FBXL16Q8N461 479 aa20.96■□□□□ 0.95
IKBKB-228ENST00000523517 CHAF1AQ13111 956 aaPredicted RBP20.96■□□□□ 0.95
IKBKB-228ENST00000523517 SNW1Q13573 536 aaKnown RBP20.96■□□□□ 0.95
IKBKB-228ENST00000523517 IQCB1Q15051 598 aa20.96■□□□□ 0.95
IKBKB-228ENST00000523517 CCDC73Q6ZRK6 1079 aa20.96■□□□□ 0.95
IKBKB-228ENST00000523517 WDR17Q8IZU2 1322 aa20.96■□□□□ 0.95
IKBKB-228ENST00000523517 EVCP57679 992 aa20.95■□□□□ 0.94
IKBKB-228ENST00000523517 GUCY1B3Q02153 619 aa20.95■□□□□ 0.94
IKBKB-228ENST00000523517 LRMPQ12912 555 aa20.95■□□□□ 0.94
IKBKB-228ENST00000523517 NKX1-1Q15270 411 aaPredicted RBP20.95■□□□□ 0.94
IKBKB-228ENST00000523517 STX1AQ16623 288 aa20.95■□□□□ 0.94
IKBKB-228ENST00000523517 LRRFIP1Q32MZ4 808 aaKnown RBP20.95■□□□□ 0.94
IKBKB-228ENST00000523517 CCDC158Q5M9N0 1113 aa20.95■□□□□ 0.94
IKBKB-228ENST00000523517 ZSCAN25Q6NSZ9 544 aa20.95■□□□□ 0.94
IKBKB-228ENST00000523517 TOM1L2Q6ZVM7 507 aa20.95■□□□□ 0.94
IKBKB-228ENST00000523517 ILDR1Q86SU0 546 aaPredicted RBP20.95■□□□□ 0.94
IKBKB-228ENST00000523517 ISCA1Q9BUE6 129 aa20.95■□□□□ 0.94
IKBKB-228ENST00000523517 CTNNA3Q9UI47 895 aa20.95■□□□□ 0.94
IKBKB-228ENST00000523517 KCPQ6ZWJ8 1503 aa20.95■□□□□ 0.94
IKBKB-228ENST00000523517 PPFIA3O75145 1194 aa20.95■□□□□ 0.94
IKBKB-228ENST00000523517 CDC25BP30305 580 aa20.95■□□□□ 0.94
IKBKB-228ENST00000523517 CCDC57Q2TAC2 916 aa20.95■□□□□ 0.94
IKBKB-228ENST00000523517 ZNF710Q8N1W2 664 aa20.95■□□□□ 0.94
IKBKB-228ENST00000523517 CARMIL3Q8ND23 1372 aa20.94■□□□□ 0.94
IKBKB-228ENST00000523517 TTC39AQ5SRH9 613 aa20.94■□□□□ 0.94
IKBKB-228ENST00000523517 C11orf57Q6ZUT1 292 aaPredicted RBP20.94■□□□□ 0.94
IKBKB-228ENST00000523517 ENGASEQ8NFI3 743 aa20.94■□□□□ 0.94
IKBKB-228ENST00000523517 CLIP2Q9UDT6 1046 aa20.94■□□□□ 0.94
IKBKB-228ENST00000523517 GOLGA6L19H0YKK7 550 aa20.94■□□□□ 0.94
IKBKB-228ENST00000523517 FDPSP14324 419 aaKnown RBP20.94■□□□□ 0.94
IKBKB-228ENST00000523517 FAM160A1Q05DH4 1040 aa20.94■□□□□ 0.94
IKBKB-228ENST00000523517 GORABQ5T7V8 394 aa20.94■□□□□ 0.94
IKBKB-228ENST00000523517 SARM1Q6SZW1 724 aa20.94■□□□□ 0.94
IKBKB-228ENST00000523517 AKAP2Q9Y2D5 859 aa20.94■□□□□ 0.94
IKBKB-228ENST00000523517 TJP1Q07157 1748 aa20.94■□□□□ 0.94
IKBKB-228ENST00000523517 KINO60870 393 aaKnown RBP20.93■□□□□ 0.94
IKBKB-228ENST00000523517 ADORA1P30542 326 aa20.93■□□□□ 0.94
IKBKB-228ENST00000523517 XAGE2Q96GT9 111 aa20.93■□□□□ 0.94
IKBKB-228ENST00000523517 NUP188Q5SRE5 1749 aa20.93■□□□□ 0.94
IKBKB-228ENST00000523517 FOXP2O15409 715 aa20.93■□□□□ 0.94
IKBKB-228ENST00000523517 ZFYP08048 801 aaPredicted RBP20.93■□□□□ 0.94
IKBKB-228ENST00000523517 ME1P48163 572 aa20.93■□□□□ 0.94
IKBKB-228ENST00000523517 TCIRG1Q13488 830 aa20.93■□□□□ 0.94
IKBKB-228ENST00000523517 WASHC4Q2M389 1173 aa20.93■□□□□ 0.94
IKBKB-228ENST00000523517 PRDM11Q9NQV5 511 aa20.93■□□□□ 0.94
IKBKB-228ENST00000523517 GPHNQ9NQX3 736 aaPredicted RBP20.93■□□□□ 0.94
IKBKB-228ENST00000523517 FBXO3Q9UK99 471 aa20.93■□□□□ 0.94
IKBKB-228ENST00000523517 IMMTQ16891 758 aaKnown RBP20.92■□□□□ 0.94
IKBKB-228ENST00000523517 FSIP1Q8NA03 581 aa20.92■□□□□ 0.94
IKBKB-228ENST00000523517 RIOK3O14730 519 aaKnown RBP20.92■□□□□ 0.94
IKBKB-228ENST00000523517 RTEL1Q9NZ71 1219 aa20.91■□□□□ 0.94
IKBKB-228ENST00000523517 HAND2P61296 217 aa20.9■□□□□ 0.94
IKBKB-228ENST00000523517 TNS2Q63HR2 1409 aa20.9■□□□□ 0.94
IKBKB-228ENST00000523517 FAM177BA6PVY3 158 aa20.9■□□□□ 0.94
IKBKB-228ENST00000523517 FGAP02671 866 aa20.9■□□□□ 0.94
IKBKB-228ENST00000523517 SCARF1Q14162 830 aa20.9■□□□□ 0.94
IKBKB-228ENST00000523517 CCDC144BQ3MJ40 725 aa20.9■□□□□ 0.94
IKBKB-228ENST00000523517 CCDC144CPQ8IYA2 1237 aa20.9■□□□□ 0.94
IKBKB-228ENST00000523517 CACTINQ8WUQ7 758 aaKnown RBP20.9■□□□□ 0.94
IKBKB-228ENST00000523517 BCL2L12Q9HB09 334 aa20.9■□□□□ 0.94
IKBKB-228ENST00000523517 ANO10Q9NW15 660 aa20.9■□□□□ 0.94
IKBKB-228ENST00000523517 SPEF2Q9C093 1822 aa20.9■□□□□ 0.94
IKBKB-228ENST00000523517 IL2RBP14784 551 aa20.89■□□□□ 0.94
IKBKB-228ENST00000523517 TRIM28Q13263 835 aaKnown RBP20.89■□□□□ 0.94
IKBKB-228ENST00000523517 MRFAP1L1Q96HT8 127 aa20.89■□□□□ 0.94
IKBKB-228ENST00000523517 PCDHA7Q9UN72 937 aa20.89■□□□□ 0.94
IKBKB-228ENST00000523517 LAMA4Q16363 1823 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms