RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 NPHP1O15259 732 aa24.99■■□□□ 1.59
SQLE-206ENST00000523430 RNF113AO15541 343 aaKnown RBP24.99■■□□□ 1.59
SQLE-206ENST00000523430 ZNF827Q17R98 1081 aa24.98■■□□□ 1.59
SQLE-206ENST00000523430 TICAM2Q86XR7 235 aa24.98■■□□□ 1.59
SQLE-206ENST00000523430 CNBD1Q8NA66 436 aa24.98■■□□□ 1.59
SQLE-206ENST00000523430 HELLSQ9NRZ9 838 aa24.98■■□□□ 1.59
SQLE-206ENST00000523430 BSDC1Q9NW68 430 aaPredicted RBP24.98■■□□□ 1.59
SQLE-206ENST00000523430 MAST3O60307 1309 aa24.98■■□□□ 1.59
SQLE-206ENST00000523430 SLC27A2O14975 620 aa24.98■■□□□ 1.59
SQLE-206ENST00000523430 PLSCR1O15162 318 aa24.97■■□□□ 1.59
SQLE-206ENST00000523430 NFKBIBQ15653 356 aa24.97■■□□□ 1.59
SQLE-206ENST00000523430 ADCK5Q3MIX3 580 aa24.97■■□□□ 1.59
SQLE-206ENST00000523430 MYH7P12883 1935 aa24.97■■□□□ 1.59
SQLE-206ENST00000523430 M0R2C6 588 aa24.96■■□□□ 1.59
SQLE-206ENST00000523430 CYP2E1P05181 493 aaPredicted RBP24.96■■□□□ 1.59
SQLE-206ENST00000523430 UQCRFS1P1P0C7P4 283 aa24.96■■□□□ 1.59
SQLE-206ENST00000523430 POTEAQ6S8J7 498 aa24.96■■□□□ 1.59
SQLE-206ENST00000523430 NOL8Q76FK4 1167 aaKnown RBP24.96■■□□□ 1.59
SQLE-206ENST00000523430 CHMP5Q9NZZ3 219 aa24.96■■□□□ 1.59
SQLE-206ENST00000523430 MINPP1Q9UNW1 487 aa24.96■■□□□ 1.59
SQLE-206ENST00000523430 TAF6LQ9Y6J9 622 aa24.96■■□□□ 1.59
SQLE-206ENST00000523430 CPA1P15085 419 aa24.95■■□□□ 1.58
SQLE-206ENST00000523430 PRR5LQ6MZQ0 368 aa24.95■■□□□ 1.58
SQLE-206ENST00000523430 JAKMIP1Q96N16 626 aaKnown RBP24.95■■□□□ 1.58
SQLE-206ENST00000523430 PIH1D3Q9NQM4 214 aaKnown RBP24.95■■□□□ 1.58
SQLE-206ENST00000523430 HMG20BQ9P0W2 317 aa24.95■■□□□ 1.58
SQLE-206ENST00000523430 RPAP1Q9BWH6 1393 aaPredicted RBP24.94■■□□□ 1.58
SQLE-206ENST00000523430 WTIPA6NIX2 430 aaPredicted RBP24.94■■□□□ 1.58
SQLE-206ENST00000523430 CASTP20810 708 aaKnown RBP24.94■■□□□ 1.58
SQLE-206ENST00000523430 TM4SF1P30408 202 aa24.94■■□□□ 1.58
SQLE-206ENST00000523430 RASGRF1Q13972 1273 aa24.94■■□□□ 1.58
SQLE-206ENST00000523430 ZKSCAN1P17029 563 aaPredicted RBP24.94■■□□□ 1.58
SQLE-206ENST00000523430 MCM2P49736 904 aa24.94■■□□□ 1.58
SQLE-206ENST00000523430 VPS53Q5VIR6 699 aa24.94■■□□□ 1.58
SQLE-206ENST00000523430 OSBP2Q969R2 916 aa24.94■■□□□ 1.58
SQLE-206ENST00000523430 TMX3Q96JJ7 454 aa24.94■■□□□ 1.58
SQLE-206ENST00000523430 TTC14Q96N46 770 aa24.94■■□□□ 1.58
SQLE-206ENST00000523430 BCAMP50895 628 aa24.93■■□□□ 1.58
SQLE-206ENST00000523430 RPS8P62241 208 aaKnown RBP24.93■■□□□ 1.58
SQLE-206ENST00000523430 AKT1S1Q96B36 256 aa24.93■■□□□ 1.58
SQLE-206ENST00000523430 MYO5AQ9Y4I1 1855 aaKnown RBP24.93■■□□□ 1.58
SQLE-206ENST00000523430 ZFYP08048 801 aaPredicted RBP24.92■■□□□ 1.58
SQLE-206ENST00000523430 LRRFIP1Q32MZ4 808 aaKnown RBP24.92■■□□□ 1.58
SQLE-206ENST00000523430 SPATA5Q8NB90 893 aa24.92■■□□□ 1.58
SQLE-206ENST00000523430 TFCP2L1Q9NZI6 479 aa24.92■■□□□ 1.58
SQLE-206ENST00000523430 DOCK2Q92608 1830 aa24.92■■□□□ 1.58
SQLE-206ENST00000523430 RGPD3A6NKT7 1758 aaPredicted RBP24.92■■□□□ 1.58
SQLE-206ENST00000523430 RGPD4Q7Z3J3 1758 aa24.92■■□□□ 1.58
SQLE-206ENST00000523430 DDR1Q08345 913 aa24.92■■□□□ 1.58
SQLE-206ENST00000523430 TTF1Q15361 905 aaPredicted RBP24.92■■□□□ 1.58
SQLE-206ENST00000523430 RNF20Q5VTR2 975 aa24.92■■□□□ 1.58
SQLE-206ENST00000523430 COL9A3Q14050 684 aaPredicted RBP24.91■■□□□ 1.58
SQLE-206ENST00000523430 WASHC4Q2M389 1173 aa24.91■■□□□ 1.58
SQLE-206ENST00000523430 U3KPZ7 1027 aaPredicted RBP24.91■■□□□ 1.58
SQLE-206ENST00000523430 FRAT2O75474 233 aaPredicted RBP24.9■■□□□ 1.58
SQLE-206ENST00000523430 SERPINB2P05120 415 aa24.9■■□□□ 1.58
SQLE-206ENST00000523430 APPBP2Q92624 585 aa24.9■■□□□ 1.58
SQLE-206ENST00000523430 TM6SF1Q9BZW5 370 aa24.9■■□□□ 1.58
SQLE-206ENST00000523430 ZSWIM6Q9HCJ5 1215 aa24.9■■□□□ 1.58
SQLE-206ENST00000523430 IDH1O75874 414 aaKnown RBP24.89■■□□□ 1.58
SQLE-206ENST00000523430 AK2P54819 239 aa24.89■■□□□ 1.58
SQLE-206ENST00000523430 SLC51AQ86UW1 340 aa24.89■■□□□ 1.58
SQLE-206ENST00000523430 ZGPATQ8N5A5 531 aaKnown RBP24.89■■□□□ 1.58
SQLE-206ENST00000523430 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.89■■□□□ 1.58
SQLE-206ENST00000523430 CIZ1Q9ULV3 898 aaPredicted RBP24.89■■□□□ 1.58
SQLE-206ENST00000523430 ADD2P35612 726 aa24.89■■□□□ 1.57
SQLE-206ENST00000523430 UBE4AQ14139 1066 aa24.89■■□□□ 1.57
SQLE-206ENST00000523430 DSCC1Q9BVC3 393 aa24.89■■□□□ 1.57
SQLE-206ENST00000523430 PUS7LQ9H0K6 701 aaKnown RBP24.89■■□□□ 1.57
SQLE-206ENST00000523430 COL1A1P02452 1464 aaPredicted RBP24.89■■□□□ 1.57
SQLE-206ENST00000523430 POLRMTO00411 1230 aaKnown RBP24.88■■□□□ 1.57
SQLE-206ENST00000523430 HSPD1P10809 573 aaKnown RBP24.88■■□□□ 1.57
SQLE-206ENST00000523430 GYG1P46976 350 aa24.88■■□□□ 1.57
SQLE-206ENST00000523430 WWC3Q9ULE0 1092 aa24.88■■□□□ 1.57
SQLE-206ENST00000523430 ZNF804BA4D1E1 1349 aa24.88■■□□□ 1.57
SQLE-206ENST00000523430 HMGB2P26583 209 aaKnown RBP24.87■■□□□ 1.57
SQLE-206ENST00000523430 KLRK1P26718 216 aa24.87■■□□□ 1.57
SQLE-206ENST00000523430 ST5P78524 1137 aa24.87■■□□□ 1.57
SQLE-206ENST00000523430 SLC9C2Q5TAH2 1124 aa24.87■■□□□ 1.57
SQLE-206ENST00000523430 RUFY3Q7L099 469 aa24.87■■□□□ 1.57
SQLE-206ENST00000523430 COL23A1Q86Y22 540 aaPredicted RBP24.87■■□□□ 1.57
SQLE-206ENST00000523430 CYP46A1Q9Y6A2 500 aa24.87■■□□□ 1.57
SQLE-206ENST00000523430 CYP21A2P08686 494 aa24.87■■□□□ 1.57
SQLE-206ENST00000523430 IL27Q8NEV9 243 aa24.87■■□□□ 1.57
SQLE-206ENST00000523430 FOXP2O15409 715 aa24.86■■□□□ 1.57
SQLE-206ENST00000523430 GRAPQ13588 217 aa24.86■■□□□ 1.57
SQLE-206ENST00000523430 CUL4AQ13619 759 aa24.86■■□□□ 1.57
SQLE-206ENST00000523430 TSGA10IPQ3SY00 556 aa24.86■■□□□ 1.57
SQLE-206ENST00000523430 ZSCAN25Q6NSZ9 544 aa24.86■■□□□ 1.57
SQLE-206ENST00000523430 GRAPLQ8TC17 118 aaPredicted RBP24.86■■□□□ 1.57
SQLE-206ENST00000523430 PDRG1Q9NUG6 133 aa24.86■■□□□ 1.57
SQLE-206ENST00000523430 IQSEC3Q9UPP2 1182 aaPredicted RBP24.86■■□□□ 1.57
SQLE-206ENST00000523430 PDE6AP16499 860 aa24.85■■□□□ 1.57
SQLE-206ENST00000523430 FBXO41Q8TF61 875 aa24.85■■□□□ 1.57
SQLE-206ENST00000523430 LARP6Q9BRS8 491 aaKnown RBP24.85■■□□□ 1.57
SQLE-206ENST00000523430 A0A0G2JLW4 131 aa24.85■■□□□ 1.57
SQLE-206ENST00000523430 ZNF532Q9HCE3 1301 aa24.85■■□□□ 1.57
SQLE-206ENST00000523430 TCRBV5S4A2TA0A5A2 114 aa24.84■■□□□ 1.57
SQLE-206ENST00000523430 PSMA5P28066 241 aa24.84■■□□□ 1.57
SQLE-206ENST00000523430 CRY2Q49AN0 593 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms