RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 CCER2I3L3R5 266 aa8.85□□□□□ -0.99
LINC00534-203ENST00000523406 FAM157BP0CG42 384 aa8.85□□□□□ -0.99
LINC00534-203ENST00000523406 ITGA6P23229 1130 aa8.85□□□□□ -0.99
LINC00534-203ENST00000523406 FIGNL1Q6PIW4 674 aa8.85□□□□□ -0.99
LINC00534-203ENST00000523406 NUDT16Q96DE0 195 aaKnown RBP8.85□□□□□ -0.99
LINC00534-203ENST00000523406 GMCL1Q96IK5 515 aa8.85□□□□□ -0.99
LINC00534-203ENST00000523406 CEP63Q96MT8 703 aa8.85□□□□□ -0.99
LINC00534-203ENST00000523406 YEATS2Q9ULM3 1422 aa8.85□□□□□ -0.99
LINC00534-203ENST00000523406 MROH1Q8NDA8 1641 aa8.84□□□□□ -0.99
LINC00534-203ENST00000523406 RNF17Q9BXT8 1623 aaKnown RBP8.84□□□□□ -0.99
LINC00534-203ENST00000523406 EFSO43281 561 aa8.84□□□□□ -0.99
LINC00534-203ENST00000523406 TSPOAP1O95153 1857 aa8.84□□□□□ -0.99
LINC00534-203ENST00000523406 USP5P45974 858 aa8.84□□□□□ -0.99
LINC00534-203ENST00000523406 FRMPD1Q5SYB0 1578 aa8.84□□□□□ -0.99
LINC00534-203ENST00000523406 FOXD4L4Q8WXT5 416 aaPredicted RBP8.84□□□□□ -0.99
LINC00534-203ENST00000523406 PIK3R5Q8WYR1 880 aa8.84□□□□□ -0.99
LINC00534-203ENST00000523406 NDFIP2Q9NV92 336 aa8.84□□□□□ -0.99
LINC00534-203ENST00000523406 DIP2CQ9Y2E4 1556 aa8.84□□□□□ -0.99
LINC00534-203ENST00000523406 RTCBQ9Y3I0 505 aaKnown RBP8.84□□□□□ -0.99
LINC00534-203ENST00000523406 PCDHGC4Q9Y5F7 938 aa8.84□□□□□ -0.99
LINC00534-203ENST00000523406 EFCAB6Q5THR3 1501 aa8.84□□□□□ -0.99
LINC00534-203ENST00000523406 CNTLNQ9NXG0 1405 aa8.83□□□□□ -1
LINC00534-203ENST00000523406 ATXN7O15265 892 aaPredicted RBP8.83□□□□□ -1
LINC00534-203ENST00000523406 KCNQ4P56696 695 aa8.83□□□□□ -1
LINC00534-203ENST00000523406 PDE3BQ13370 1112 aa8.83□□□□□ -1
LINC00534-203ENST00000523406 ZNF837Q96EG3 531 aaPredicted RBP8.83□□□□□ -1
LINC00534-203ENST00000523406 DMRTB1Q96MA1 342 aa8.83□□□□□ -1
LINC00534-203ENST00000523406 GGNBP2Q9H3C7 697 aa8.83□□□□□ -1
LINC00534-203ENST00000523406 BRD7Q9NPI1 651 aa8.83□□□□□ -1
LINC00534-203ENST00000523406 AMOTL2Q9Y2J4 779 aa8.83□□□□□ -1
LINC00534-203ENST00000523406 USP20Q9Y2K6 914 aa8.83□□□□□ -1
LINC00534-203ENST00000523406 KCNMB2Q9Y691 235 aa8.83□□□□□ -1
LINC00534-203ENST00000523406 SPHKAPQ2M3C7 1700 aa8.83□□□□□ -1
LINC00534-203ENST00000523406 RICTORQ6R327 1708 aa8.83□□□□□ -1
LINC00534-203ENST00000523406 ABCC3O15438 1527 aa8.82□□□□□ -1
LINC00534-203ENST00000523406 TREHO43280 583 aa8.82□□□□□ -1
LINC00534-203ENST00000523406 PPFIA3O75145 1194 aa8.82□□□□□ -1
LINC00534-203ENST00000523406 RPLP1P05386 114 aaKnown RBP8.82□□□□□ -1
LINC00534-203ENST00000523406 DSC3Q14574 896 aa8.82□□□□□ -1
LINC00534-203ENST00000523406 ALKBH8Q96BT7 664 aaKnown RBP8.82□□□□□ -1
LINC00534-203ENST00000523406 HCN2Q9UL51 889 aa8.82□□□□□ -1
LINC00534-203ENST00000523406 GPRASP1Q5JY77 1395 aa8.82□□□□□ -1
LINC00534-203ENST00000523406 NPATQ14207 1427 aa8.81□□□□□ -1
LINC00534-203ENST00000523406 ZMYM4Q5VZL5 1548 aa8.81□□□□□ -1
LINC00534-203ENST00000523406 CLTCL1P53675 1640 aa8.81□□□□□ -1
LINC00534-203ENST00000523406 GPR182O15218 404 aa8.81□□□□□ -1
LINC00534-203ENST00000523406 BNIP3LO60238 219 aa8.81□□□□□ -1
LINC00534-203ENST00000523406 EPB42P16452 691 aa8.81□□□□□ -1
LINC00534-203ENST00000523406 PCSK2P16519 638 aa8.81□□□□□ -1
LINC00534-203ENST00000523406 TNP2Q05952 138 aa8.81□□□□□ -1
LINC00534-203ENST00000523406 COL19A1Q14993 1142 aa8.81□□□□□ -1
LINC00534-203ENST00000523406 TRIP4Q15650 581 aaPredicted RBP8.81□□□□□ -1
LINC00534-203ENST00000523406 C11orf16Q9NQ32 467 aa8.81□□□□□ -1
LINC00534-203ENST00000523406 PPRC1Q5VV67 1664 aaKnown RBP8.81□□□□□ -1
LINC00534-203ENST00000523406 RPGRIP1LQ68CZ1 1315 aa8.8□□□□□ -1
LINC00534-203ENST00000523406 CEP152O94986 1710 aa8.8□□□□□ -1
LINC00534-203ENST00000523406 BCORL1Q5H9F3 1711 aa8.8□□□□□ -1
LINC00534-203ENST00000523406 EGFRP00533 1210 aa8.8□□□□□ -1
LINC00534-203ENST00000523406 MAPTP10636 758 aaKnown RBP8.8□□□□□ -1
LINC00534-203ENST00000523406 TMF1P82094 1093 aa8.8□□□□□ -1
LINC00534-203ENST00000523406 EHHADHQ08426 723 aa8.8□□□□□ -1
LINC00534-203ENST00000523406 LAMC2Q13753 1193 aa8.8□□□□□ -1
LINC00534-203ENST00000523406 MLECQ14165 292 aa8.8□□□□□ -1
LINC00534-203ENST00000523406 CMTR1Q8N1G2 835 aaKnown RBP8.8□□□□□ -1
LINC00534-203ENST00000523406 TMC1Q8TDI8 760 aa8.8□□□□□ -1
LINC00534-203ENST00000523406 DCDC2BA2VCK2 349 aa8.79□□□□□ -1
LINC00534-203ENST00000523406 A6NHS1 94 aa8.79□□□□□ -1
LINC00534-203ENST00000523406 KHNYNO15037 678 aaKnown RBP8.79□□□□□ -1
LINC00534-203ENST00000523406 FMR1Q06787 632 aaKnown RBP eCLIP8.79□□□□□ -11e-11■■■■■ 36.3
LINC00534-203ENST00000523406 SFSWAPQ12872 951 aaKnown RBP8.79□□□□□ -1
LINC00534-203ENST00000523406 XKR5Q6UX68 686 aa8.79□□□□□ -1
LINC00534-203ENST00000523406 FBXO33Q7Z6M2 555 aa8.79□□□□□ -1
LINC00534-203ENST00000523406 NANOS1Q8WY41 292 aaKnown RBP8.79□□□□□ -1
LINC00534-203ENST00000523406 GTPBP3Q969Y2 492 aaKnown RBP8.79□□□□□ -1
LINC00534-203ENST00000523406 STRN4Q9NRL3 753 aa8.79□□□□□ -1
LINC00534-203ENST00000523406 SLC52A1Q9NWF4 448 aa8.79□□□□□ -1
LINC00534-203ENST00000523406 KCNH4Q9UQ05 1017 aa8.79□□□□□ -1
LINC00534-203ENST00000523406 ARHGAP31Q2M1Z3 1444 aa8.79□□□□□ -1
LINC00534-203ENST00000523406 UGGT1Q9NYU2 1555 aa8.78□□□□□ -1
LINC00534-203ENST00000523406 EIF3AQ14152 1382 aaKnown RBP8.78□□□□□ -1
LINC00534-203ENST00000523406 C8orf34Q49A92 452 aa8.78□□□□□ -1
LINC00534-203ENST00000523406 ATXN7L1Q9ULK2 861 aaPredicted RBP8.78□□□□□ -1
LINC00534-203ENST00000523406 FNDC3AQ9Y2H6 1198 aaKnown RBP8.78□□□□□ -1
LINC00534-203ENST00000523406 TRPM1Q7Z4N2 1603 aa8.78□□□□□ -1
LINC00534-203ENST00000523406 ADGRF5Q8IZF2 1346 aa8.78□□□□□ -1
LINC00534-203ENST00000523406 NEURL4Q96JN8 1562 aa8.78□□□□□ -1
LINC00534-203ENST00000523406 RBM47A0AV96 593 aaKnown RBP8.77□□□□□ -1.01
LINC00534-203ENST00000523406 UBAP1LF5GYI3 381 aa8.77□□□□□ -1.01
LINC00534-203ENST00000523406 XYLBO75191 536 aa8.77□□□□□ -1.01
LINC00534-203ENST00000523406 PLCB3Q01970 1234 aa8.77□□□□□ -1.01
LINC00534-203ENST00000523406 CNGB1Q14028 1251 aaPredicted RBP8.77□□□□□ -1.01
LINC00534-203ENST00000523406 PDE12Q6L8Q7 609 aaKnown RBP8.77□□□□□ -1.01
LINC00534-203ENST00000523406 ABHD17AQ96GS6 310 aa8.77□□□□□ -1.01
LINC00534-203ENST00000523406 CFHR5Q9BXR6 569 aa8.77□□□□□ -1.01
LINC00534-203ENST00000523406 NIF3L1Q9GZT8 377 aa8.77□□□□□ -1.01
LINC00534-203ENST00000523406 PRKRIP1Q9H875 184 aaPredicted RBP8.77□□□□□ -1.01
LINC00534-203ENST00000523406 NOS1P29475 1434 aa8.77□□□□□ -1.01
LINC00534-203ENST00000523406 KIF1BO60333 1816 aa8.77□□□□□ -1.01
LINC00534-203ENST00000523406 CAMSAP1Q5T5Y3 1602 aa8.76□□□□□ -1.01
LINC00534-203ENST00000523406 P4HBP07237 508 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms